FFCP PHASE1:Mm9::chr9:108957297..108957310,-: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=190|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr9:108957297..108957310,-|id=chr9:108957297..108957310,-|ontology_enrichment_celltype=CL:0000988!1.42e-23!32;CL:0002032!1.42e-23!32;CL:0000037!1.42e-23!32;CL:0000566!1.42e-23!32;CL:0000837!1.42e-23!32;CL:0000838!7.29e-20!12;CL:0000791!2.10e-18!9;CL:0000789!2.10e-18!9;CL:0002420!2.10e-18!9;CL:0002419!2.10e-18!9;CL:0000790!2.10e-18!9;CL:0002320!3.42e-18!46;CL:0000134!3.42e-18!46;CL:0000542!4.11e-18!13;CL:0000051!4.11e-18!13;CL:0000084!5.97e-18!11;CL:0000827!5.97e-18!11;CL:0000624!1.83e-16!8;CL:0000219!7.27e-16!54;CL:0002031!1.43e-15!25;CL:0000738!3.52e-13!17;CL:0002087!3.52e-13!17;CL:0000893!1.34e-12!6;CL:0002489!1.34e-12!6;CL:0000898!1.34e-12!6;CL:0000809!1.34e-12!6;CL:0000810!1.34e-12!6;CL:0000895!1.34e-12!6;CL:0000808!1.34e-12!6;CL:0000894!1.34e-12!6;CL:0000806!1.34e-12!6;CL:0000807!1.34e-12!6;CL:0000805!1.34e-12!6;CL:0002425!1.34e-12!6;CL:0002436!1.34e-12!6;CL:0002427!1.34e-12!6;CL:0002428!1.34e-12!6;CL:0002429!1.34e-12!6;CL:0002433!1.34e-12!6;CL:0002431!1.34e-12!6;CL:0002432!1.34e-12!6;CL:0000063!7.37e-12!66;CL:0000034!3.08e-10!97;CL:0000049!1.91e-08!19;CL:0000723!2.00e-08!91;CL:0000048!2.00e-08!91;CL:0000144!4.14e-08!121;CL:0000012!4.14e-08!121|ontology_enrichment_celltype_v019_2=CL:0000791,4.42e-37,9;CL:0000789,4.42e-37,9;CL:0002420,4.42e-37,9;CL:0002419,4.42e-37,9;CL:0000790,4.42e-37,9;CL:0000838,5.71e-35,12;CL:0000542,3.33e-32,13;CL:0000051,3.33e-32,13;CL:0000624,5.34e-32,8;CL:0000988,2.44e-30,32;CL:0002032,2.44e-30,32;CL:0000037,2.44e-30,32;CL:0000837,2.44e-30,32;CL:0000084,3.35e-30,11;CL:0000827,3.35e-30,11;CL:0000738,2.19e-24,17;CL:0002087,2.19e-24,17;CL:0002031,2.62e-24,25;CL:0002320,7.15e-24,46;CL:0000134,7.15e-24,46;CL:0000893,5.54e-22,6;CL:0002489,5.54e-22,6;CL:0000898,5.54e-22,6;CL:0000809,5.54e-22,6;CL:0000810,5.54e-22,6;CL:0000895,5.54e-22,6;CL:0000808,5.54e-22,6;CL:0000894,5.54e-22,6;CL:0000806,5.54e-22,6;CL:0000807,5.54e-22,6;CL:0000805,5.54e-22,6;CL:0002425,5.54e-22,6;CL:0002436,5.54e-22,6;CL:0002427,5.54e-22,6;CL:0002428,5.54e-22,6;CL:0002429,5.54e-22,6;CL:0002433,5.54e-22,6;CL:0002431,5.54e-22,6;CL:0002432,5.54e-22,6;CL:0000219,4.75e-20,54;CL:0000034,7.38e-12,97;CL:0000723,4.52e-11,91;CL:0000048,4.52e-11,91;CL:0000815,5.73e-07,1;CL:0000792,5.73e-07,1;CL:0000213,8.36e-07,1;CL:0002078,8.36e-07,1;CL:0000115,8.36e-07,1;CL:0002262,8.36e-07,1;CL:1000398,8.36e-07,1;CL:0000625,9.48e-07,1|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002384!3.42e-18!46;UBERON:0002193!4.30e-11!48;UBERON:0002390!7.93e-11!45;UBERON:0003061!7.93e-11!45;UBERON:0002405!6.19e-08!70;UBERON:0004177!7.52e-07!29|ontology_enrichment_uberon_v019_2=UBERON:0002384,7.15e-24,46;UBERON:0002390,2.86e-08,45;UBERON:0003061,2.86e-08,45;UBERON:0002193,1.11e-07,48;UBERON:0002405,1.11e-07,48;UBERON:0002394,8.36e-07,1;UBERON:0001281,8.36e-07,1;UBERON:0000353,8.36e-07,1;UBERON:0003497,8.36e-07,1;UBERON:0003909,8.36e-07,1;UBERON:0003928,8.36e-07,1;UBERON:0003835,8.36e-07,1;UBERON:0003513,8.36e-07,1;UBERON:0001280,8.36e-07,1;UBERON:0004647,8.36e-07,1;UBERON:0002294,8.36e-07,1;UBERON:0001173,8.36e-07,1;UBERON:0004912,8.36e-07,1;UBERON:0005171,8.36e-07,1|phase1_expression=0,0,0,0,0,0.16787927191189,0,14.2035655785734,10.98152032783,11.0010327371337,1.02730780935303,0.8774937489487,2.56801094896809,2.01066925563694,0.666219523631325,0.202475267389826,0,3.15462165358238,1.91960207048034,0,0,0,0.522399578277871,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.52343472721246,2.17608642603403,3.6970317905671,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0914876436024097,0,0,0,0.15279824777681,0,0,0,0.075726193333184,0,6.66688324013859,0.860423876981386,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.258937883647172,0,0,0,0,0,0,0,0,0,0,0,0.220841518460394,0,0,0,0,0,0.359445373517761,1.79970819298022,0.381210681219194,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.40442637462647,1.80143534980301,0.284163499395593,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.264450566663544,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.184753190166605,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.491764273019036,0,0,0.117211686592203,0,0,0,0,0.215423397732799,0,0,0,0,0,0,0,0,0,0,0.164970122972535,1.32745138339963,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.177340233642274,0,0,0,0,0,0,0,0,0,0,0,0,0.370850604021019,0.341741761595705,0.206386867963223,0,0,0,0,1.69978429993855,0.559805809294632,0.690999869022119,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179026695667481,0,0,0,0.100966449948148,0,0,0,0.0962118416403295,0.233753804363138,0,0,0,0,0,0,0.183151624267265,0,0,0,0,0,0,0,0,0,0,0,0,0.103787347584177,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0941093804153306,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0|short_description=p@chr9:108957297..108957310,-}} | ||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=190 | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr9:108957297..108957310,- | |||
|id=chr9:108957297..108957310,- | |||
|ontology_enrichment_celltype=CL:0000988!1.42e-23!32;CL:0002032!1.42e-23!32;CL:0000037!1.42e-23!32;CL:0000566!1.42e-23!32;CL:0000837!1.42e-23!32;CL:0000838!7.29e-20!12;CL:0000791!2.10e-18!9;CL:0000789!2.10e-18!9;CL:0002420!2.10e-18!9;CL:0002419!2.10e-18!9;CL:0000790!2.10e-18!9;CL:0002320!3.42e-18!46;CL:0000134!3.42e-18!46;CL:0000542!4.11e-18!13;CL:0000051!4.11e-18!13;CL:0000084!5.97e-18!11;CL:0000827!5.97e-18!11;CL:0000624!1.83e-16!8;CL:0000219!7.27e-16!54;CL:0002031!1.43e-15!25;CL:0000738!3.52e-13!17;CL:0002087!3.52e-13!17;CL:0000893!1.34e-12!6;CL:0002489!1.34e-12!6;CL:0000898!1.34e-12!6;CL:0000809!1.34e-12!6;CL:0000810!1.34e-12!6;CL:0000895!1.34e-12!6;CL:0000808!1.34e-12!6;CL:0000894!1.34e-12!6;CL:0000806!1.34e-12!6;CL:0000807!1.34e-12!6;CL:0000805!1.34e-12!6;CL:0002425!1.34e-12!6;CL:0002436!1.34e-12!6;CL:0002427!1.34e-12!6;CL:0002428!1.34e-12!6;CL:0002429!1.34e-12!6;CL:0002433!1.34e-12!6;CL:0002431!1.34e-12!6;CL:0002432!1.34e-12!6;CL:0000063!7.37e-12!66;CL:0000034!3.08e-10!97;CL:0000049!1.91e-08!19;CL:0000723!2.00e-08!91;CL:0000048!2.00e-08!91;CL:0000144!4.14e-08!121;CL:0000012!4.14e-08!121 | |||
|ontology_enrichment_celltype_v019_2=CL:0000791,4.42e-37,9;CL:0000789,4.42e-37,9;CL:0002420,4.42e-37,9;CL:0002419,4.42e-37,9;CL:0000790,4.42e-37,9;CL:0000838,5.71e-35,12;CL:0000542,3.33e-32,13;CL:0000051,3.33e-32,13;CL:0000624,5.34e-32,8;CL:0000988,2.44e-30,32;CL:0002032,2.44e-30,32;CL:0000037,2.44e-30,32;CL:0000837,2.44e-30,32;CL:0000084,3.35e-30,11;CL:0000827,3.35e-30,11;CL:0000738,2.19e-24,17;CL:0002087,2.19e-24,17;CL:0002031,2.62e-24,25;CL:0002320,7.15e-24,46;CL:0000134,7.15e-24,46;CL:0000893,5.54e-22,6;CL:0002489,5.54e-22,6;CL:0000898,5.54e-22,6;CL:0000809,5.54e-22,6;CL:0000810,5.54e-22,6;CL:0000895,5.54e-22,6;CL:0000808,5.54e-22,6;CL:0000894,5.54e-22,6;CL:0000806,5.54e-22,6;CL:0000807,5.54e-22,6;CL:0000805,5.54e-22,6;CL:0002425,5.54e-22,6;CL:0002436,5.54e-22,6;CL:0002427,5.54e-22,6;CL:0002428,5.54e-22,6;CL:0002429,5.54e-22,6;CL:0002433,5.54e-22,6;CL:0002431,5.54e-22,6;CL:0002432,5.54e-22,6;CL:0000219,4.75e-20,54;CL:0000034,7.38e-12,97;CL:0000723,4.52e-11,91;CL:0000048,4.52e-11,91;CL:0000815,5.73e-07,1;CL:0000792,5.73e-07,1;CL:0000213,8.36e-07,1;CL:0002078,8.36e-07,1;CL:0000115,8.36e-07,1;CL:0002262,8.36e-07,1;CL:1000398,8.36e-07,1;CL:0000625,9.48e-07,1 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002384!3.42e-18!46;UBERON:0002193!4.30e-11!48;UBERON:0002390!7.93e-11!45;UBERON:0003061!7.93e-11!45;UBERON:0002405!6.19e-08!70;UBERON:0004177!7.52e-07!29 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002384,7.15e-24,46;UBERON:0002390,2.86e-08,45;UBERON:0003061,2.86e-08,45;UBERON:0002193,1.11e-07,48;UBERON:0002405,1.11e-07,48;UBERON:0002394,8.36e-07,1;UBERON:0001281,8.36e-07,1;UBERON:0000353,8.36e-07,1;UBERON:0003497,8.36e-07,1;UBERON:0003909,8.36e-07,1;UBERON:0003928,8.36e-07,1;UBERON:0003835,8.36e-07,1;UBERON:0003513,8.36e-07,1;UBERON:0001280,8.36e-07,1;UBERON:0004647,8.36e-07,1;UBERON:0002294,8.36e-07,1;UBERON:0001173,8.36e-07,1;UBERON:0004912,8.36e-07,1;UBERON:0005171,8.36e-07,1 | |||
|phase1_expression=0,0,0,0,0,0.16787927191189,0,14.2035655785734,10.98152032783,11.0010327371337,1.02730780935303,0.8774937489487,2.56801094896809,2.01066925563694,0.666219523631325,0.202475267389826,0,3.15462165358238,1.91960207048034,0,0,0,0.522399578277871,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.52343472721246,2.17608642603403,3.6970317905671,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0914876436024097,0,0,0,0.15279824777681,0,0,0,0.075726193333184,0,6.66688324013859,0.860423876981386,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.258937883647172,0,0,0,0,0,0,0,0,0,0,0,0.220841518460394,0,0,0,0,0,0.359445373517761,1.79970819298022,0.381210681219194,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.40442637462647,1.80143534980301,0.284163499395593,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.264450566663544,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.184753190166605,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.491764273019036,0,0,0.117211686592203,0,0,0,0,0.215423397732799,0,0,0,0,0,0,0,0,0,0,0.164970122972535,1.32745138339963,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.177340233642274,0,0,0,0,0,0,0,0,0,0,0,0,0.370850604021019,0.341741761595705,0.206386867963223,0,0,0,0,1.69978429993855,0.559805809294632,0.690999869022119,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179026695667481,0,0,0,0.100966449948148,0,0,0,0.0962118416403295,0.233753804363138,0,0,0,0,0,0,0.183151624267265,0,0,0,0,0,0,0,0,0,0,0,0,0.103787347584177,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0941093804153306,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr9:108957297..108957310,- | |||
}} |
Revision as of 16:52, 14 September 2013
Short description: | p@chr9:108957297..108957310, - |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr9:108957297..108957310, - |
Coexpression cluster: | MCL_coexpression_mm9:190 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
connective tissue | 7.15e-24 | 46 |
hematopoietic system | 2.86e-08 | 45 |
blood island | 2.86e-08 | 45 |
hemolymphoid system | 1.11e-07 | 48 |
immune system | 1.11e-07 | 48 |
bile duct | 8.36e-07 | 1 |
hepatic sinusoid | 8.36e-07 | 1 |
parenchyma | 8.36e-07 | 1 |
abdomen blood vessel | 8.36e-07 | 1 |
sinusoid | 8.36e-07 | 1 |
digestive system duct | 8.36e-07 | 1 |
abdominal segment blood vessel | 8.36e-07 | 1 |
trunk blood vessel | 8.36e-07 | 1 |
liver parenchyma | 8.36e-07 | 1 |
liver lobule | 8.36e-07 | 1 |
biliary system | 8.36e-07 | 1 |
biliary tree | 8.36e-07 | 1 |
biliary bud | 8.36e-07 | 1 |
hepatic duct | 8.36e-07 | 1 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.