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FFCP PHASE1:Mm9::chr4:11886091..11886093,-: Difference between revisions

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{{FFCP
{{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=3453|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr4:11886091..11886093,-|id=chr4:11886091..11886093,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=CL:0002610,1.96e-08,3;CL:0002614,5.13e-08,3|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002020!2.20e-08!34;UBERON:0000033!1.33e-07!63;UBERON:0002346!3.00e-07!71;UBERON:0003075!3.00e-07!71;UBERON:0007284!3.00e-07!71;UBERON:0001049!3.11e-07!52;UBERON:0005068!3.11e-07!52;UBERON:0006241!3.11e-07!52;UBERON:0007135!3.11e-07!52;UBERON:0000955!6.65e-07!50;UBERON:0006238!6.65e-07!50;UBERON:0002791!7.20e-07!29;UBERON:0003528!7.20e-07!29;UBERON:0001893!7.20e-07!29;UBERON:0002616!7.82e-07!49|ontology_enrichment_uberon_v019_2=UBERON:0000073,2.43e-16,54;UBERON:0001049,2.12e-13,52;UBERON:0005068,2.12e-13,52;UBERON:0006241,2.12e-13,52;UBERON:0007135,2.12e-13,52;UBERON:0001017,2.94e-13,73;UBERON:0001016,9.21e-13,75;UBERON:0002021,1.59e-12,10;UBERON:0000411,1.59e-12,10;UBERON:0001950,1.59e-12,10;UBERON:0002020,6.40e-12,34;UBERON:0003080,1.71e-11,40;UBERON:0002616,6.51e-11,46;UBERON:0003528,1.22e-10,29;UBERON:0002791,1.22e-10,29;UBERON:0001893,1.22e-10,29;UBERON:0000955,1.33e-10,47;UBERON:0006238,1.33e-10,47;UBERON:0002780,2.82e-10,39;UBERON:0001890,2.82e-10,39;UBERON:0006240,2.82e-10,39;UBERON:0002346,4.62e-10,64;UBERON:0003075,4.62e-10,64;UBERON:0007284,4.62e-10,64;UBERON:0002950,5.05e-10,4;UBERON:0001891,5.05e-10,4;UBERON:0009616,5.05e-10,4;UBERON:0010286,5.05e-10,4;UBERON:0004121,5.81e-10,95;UBERON:0000924,5.81e-10,95;UBERON:0006601,5.81e-10,95;UBERON:0003056,9.45e-09,49;UBERON:0004684,1.96e-08,3;UBERON:0002275,1.96e-08,3;UBERON:0010371,2.73e-08,73;UBERON:0002038,5.13e-08,3;UBERON:0009663,5.13e-08,3;UBERON:0009661,5.13e-08,3;UBERON:0000125,5.13e-08,3;UBERON:0002308,5.13e-08,3;UBERON:0000956,4.98e-07,21;UBERON:0001869,4.98e-07,21;UBERON:0000203,4.98e-07,21;UBERON:0002619,6.68e-07,17|phase1_expression=0.480446541314382,0,0,0,0,0,0,0.258246646883153,0.985521055061667,0,0,0,0.171200729931206,0.0874204024189974,0.333109761815663,0,0,0,0.274228867211478,0,1.36069264241712,0.0992909512008853,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.204169356262369,0,0,0,0,0,0,1.00717454380462,0.709638518536602,1.28482726513177,0,0,0.439372365468944,0.194429899074283,0,0,0.167782606057736,0.725362142011344,0,0.257259436035947,0,0,0,0,0,0,0,0.449949858640699,0,0,0,1.15265491596466,0.103689612308478,0.810035629990144,0.210324961351382,0.571301968807607,0.220868540951614,0.244981598429908,0,0,1.10115880999389,4.59674417106676,5.22262213071228,0.263772575460388,0.0914876436024097,0.52091337055676,1.3959149950069,2.25105044012672,1.68078072554491,1.76777151284201,0.711858403995515,1.1183966749518,0.37863096666592,0.0755715601067855,0.289864488701678,0,0.679971333707751,0.539703191637817,0,0,0.561777680527007,1.1930122580464,1.29893002301434,0.35333957451034,0.14084341977668,1.28326477414318,0,0,0.216491041011214,0.760079596425296,0.505524445014783,0.45673551887624,0,0.445326417194474,0.173485326766136,0,0.691846491768175,0.301445281105245,0.705532242814229,0.376999773989026,0.741584903203122,0.144599356919912,0,0.323533699894818,0.220841518460394,0,0,0,0.628340120440365,0,0.11981512450592,0,0.254140454146129,1.3481157546434,1.83000241127451,0.753926112677186,4.17178368461463,5.8814555185976,3.94797284663164,4.2182728397617,0.305518091550949,0.373220911830279,0.252722758433675,0.210441855886474,0,0.459804208866946,0,0.60281927134286,0.136072998302656,0.512454881139399,0.562210347358373,0.258703370739016,0,0.378212160335639,0,0,0.556094498451196,0,0.411564272815887,0.796137067273973,0,0,0.852490498186778,0,0.938104239924385,0,0,0.393528463494808,0.617068451549513,0.465067889500816,0.804820204198858,0.233530684734339,0.493679549740441,0.820837320395476,0.324275238183423,0.292399974850665,0.439100230582101,0.402619256281115,0.630869845692382,0.514523061896422,0,0.264450566663544,0.213288250535234,0,0,0.403367049246685,0.22237804384487,0,0,0.329397909448022,0.754005626400808,0.198956472041151,0,0,0,0,0.189667900953082,0.114248512609729,0,0,0.193952487167626,0.280543279561274,0.189709611372772,0.442830443938806,0.784993639206874,0.246794327843601,0,0,0,0,0,0.241177159752417,0,0,0.162135226775035,0.274561413188081,0,0,0,0,0,0,0.184753190166605,0,0.325929952884052,0,0,0.335012514883631,0.238043640886014,0.195133647857799,0,0.44292937929755,0.159454768657487,0.983179888294428,0.518054945597687,1.3018415272336,3.01582567878545,1.63171705145613,0,0,0.642202359951168,1.17211686592203,1.47541450839008,2.27223834483936,0,0.390438744296638,0.215423397732799,0,0,0.283076530788832,0,0.292255857911312,0.395287777946524,0.321321316421807,0.141940085208269,0.35613120733451,0.325773918707152,0.164970122972535,0,0,0.302323556964751,0,0,0.307435147943927,0,0.363533729477506,0.356497378384721,0.316036757935816,0,0,0,0,0.129358683782755,0,0,0.356737635204141,0.822745103010605,0,0,0.21183207086382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|EntrezGene=NA
|HGNC=
|MCL_coexpression_id=3453
|UniProt=NA
|association_with_transcript=NA
|description=CAGE_peak_at_chr4:11886091..11886093,-
|id=chr4:11886091..11886093,-
|ontology_enrichment_celltype=
|ontology_enrichment_celltype_v019_2=CL:0002610,1.96e-08,3;CL:0002614,5.13e-08,3
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0002020!2.20e-08!34;UBERON:0000033!1.33e-07!63;UBERON:0002346!3.00e-07!71;UBERON:0003075!3.00e-07!71;UBERON:0007284!3.00e-07!71;UBERON:0001049!3.11e-07!52;UBERON:0005068!3.11e-07!52;UBERON:0006241!3.11e-07!52;UBERON:0007135!3.11e-07!52;UBERON:0000955!6.65e-07!50;UBERON:0006238!6.65e-07!50;UBERON:0002791!7.20e-07!29;UBERON:0003528!7.20e-07!29;UBERON:0001893!7.20e-07!29;UBERON:0002616!7.82e-07!49
|ontology_enrichment_uberon_v019_2=UBERON:0000073,2.43e-16,54;UBERON:0001049,2.12e-13,52;UBERON:0005068,2.12e-13,52;UBERON:0006241,2.12e-13,52;UBERON:0007135,2.12e-13,52;UBERON:0001017,2.94e-13,73;UBERON:0001016,9.21e-13,75;UBERON:0002021,1.59e-12,10;UBERON:0000411,1.59e-12,10;UBERON:0001950,1.59e-12,10;UBERON:0002020,6.40e-12,34;UBERON:0003080,1.71e-11,40;UBERON:0002616,6.51e-11,46;UBERON:0003528,1.22e-10,29;UBERON:0002791,1.22e-10,29;UBERON:0001893,1.22e-10,29;UBERON:0000955,1.33e-10,47;UBERON:0006238,1.33e-10,47;UBERON:0002780,2.82e-10,39;UBERON:0001890,2.82e-10,39;UBERON:0006240,2.82e-10,39;UBERON:0002346,4.62e-10,64;UBERON:0003075,4.62e-10,64;UBERON:0007284,4.62e-10,64;UBERON:0002950,5.05e-10,4;UBERON:0001891,5.05e-10,4;UBERON:0009616,5.05e-10,4;UBERON:0010286,5.05e-10,4;UBERON:0004121,5.81e-10,95;UBERON:0000924,5.81e-10,95;UBERON:0006601,5.81e-10,95;UBERON:0003056,9.45e-09,49;UBERON:0004684,1.96e-08,3;UBERON:0002275,1.96e-08,3;UBERON:0010371,2.73e-08,73;UBERON:0002038,5.13e-08,3;UBERON:0009663,5.13e-08,3;UBERON:0009661,5.13e-08,3;UBERON:0000125,5.13e-08,3;UBERON:0002308,5.13e-08,3;UBERON:0000956,4.98e-07,21;UBERON:0001869,4.98e-07,21;UBERON:0000203,4.98e-07,21;UBERON:0002619,6.68e-07,17
|phase1_expression=0.480446541314382,0,0,0,0,0,0,0.258246646883153,0.985521055061667,0,0,0,0.171200729931206,0.0874204024189974,0.333109761815663,0,0,0,0.274228867211478,0,1.36069264241712,0.0992909512008853,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.204169356262369,0,0,0,0,0,0,1.00717454380462,0.709638518536602,1.28482726513177,0,0,0.439372365468944,0.194429899074283,0,0,0.167782606057736,0.725362142011344,0,0.257259436035947,0,0,0,0,0,0,0,0.449949858640699,0,0,0,1.15265491596466,0.103689612308478,0.810035629990144,0.210324961351382,0.571301968807607,0.220868540951614,0.244981598429908,0,0,1.10115880999389,4.59674417106676,5.22262213071228,0.263772575460388,0.0914876436024097,0.52091337055676,1.3959149950069,2.25105044012672,1.68078072554491,1.76777151284201,0.711858403995515,1.1183966749518,0.37863096666592,0.0755715601067855,0.289864488701678,0,0.679971333707751,0.539703191637817,0,0,0.561777680527007,1.1930122580464,1.29893002301434,0.35333957451034,0.14084341977668,1.28326477414318,0,0,0.216491041011214,0.760079596425296,0.505524445014783,0.45673551887624,0,0.445326417194474,0.173485326766136,0,0.691846491768175,0.301445281105245,0.705532242814229,0.376999773989026,0.741584903203122,0.144599356919912,0,0.323533699894818,0.220841518460394,0,0,0,0.628340120440365,0,0.11981512450592,0,0.254140454146129,1.3481157546434,1.83000241127451,0.753926112677186,4.17178368461463,5.8814555185976,3.94797284663164,4.2182728397617,0.305518091550949,0.373220911830279,0.252722758433675,0.210441855886474,0,0.459804208866946,0,0.60281927134286,0.136072998302656,0.512454881139399,0.562210347358373,0.258703370739016,0,0.378212160335639,0,0,0.556094498451196,0,0.411564272815887,0.796137067273973,0,0,0.852490498186778,0,0.938104239924385,0,0,0.393528463494808,0.617068451549513,0.465067889500816,0.804820204198858,0.233530684734339,0.493679549740441,0.820837320395476,0.324275238183423,0.292399974850665,0.439100230582101,0.402619256281115,0.630869845692382,0.514523061896422,0,0.264450566663544,0.213288250535234,0,0,0.403367049246685,0.22237804384487,0,0,0.329397909448022,0.754005626400808,0.198956472041151,0,0,0,0,0.189667900953082,0.114248512609729,0,0,0.193952487167626,0.280543279561274,0.189709611372772,0.442830443938806,0.784993639206874,0.246794327843601,0,0,0,0,0,0.241177159752417,0,0,0.162135226775035,0.274561413188081,0,0,0,0,0,0,0.184753190166605,0,0.325929952884052,0,0,0.335012514883631,0.238043640886014,0.195133647857799,0,0.44292937929755,0.159454768657487,0.983179888294428,0.518054945597687,1.3018415272336,3.01582567878545,1.63171705145613,0,0,0.642202359951168,1.17211686592203,1.47541450839008,2.27223834483936,0,0.390438744296638,0.215423397732799,0,0,0.283076530788832,0,0.292255857911312,0.395287777946524,0.321321316421807,0.141940085208269,0.35613120733451,0.325773918707152,0.164970122972535,0,0,0.302323556964751,0,0,0.307435147943927,0,0.363533729477506,0.356497378384721,0.316036757935816,0,0,0,0,0.129358683782755,0,0,0.356737635204141,0.822745103010605,0,0,0.21183207086382,0,0.16488625294148,0.484393280087717,0.0603129249281559,0.477489376012546,0,0,1.11255181206306,0.170870880797853,0,0.370389054739423,0.376736914009382,0.27338845544205,0.457556346413045,0.169978429993855,0.139951452323658,0.138199973804424,0.954670618015114,0,0,0.216010681643603,0.209088296014469,0.218362563746178,0.134864346384821,0.165306911450672,0.785267825952089,0,1.24267862617385,0,0.448549638131936,0.827292452285488,0.777804753376191,0.645799117388655,0.506868376472335,0.938857909166032,0.651021924219751,0.209718688851422,0.966336483304024,0.576060012515731,0.316011120628178,0.810900861160657,0.102710957164827,0,0,0,0.240390899039938,0,0.403865799792591,0.0762068066549998,0.100826185136841,0.0974578807397524,0.481059208201647,0.467507608726276,0.906921534460845,0,0,0,0.19318959403219,0,0.183151624267265,0.214368379079066,2.50786052017682,0.564751842617067,1.84130094602871,0,4.1244763762485,4.7955776383945,3.0215755895588,4.05013500139084,0.45032120322422,4.53142408984205,4.14208249401456,0.415149390336707,0,0.853668028770671,0.486213434136588,0.209613162627982,0.183843508450014,0,0.206035057238894,0.320919209591815,0.758091635291392,0.25347929989024,0.188626341386076,0.468207537349412,0.0640251524048693,0.459483751644906,0.476293691283074,0.347652977834566,0.38581844092741,0,0.441596760403192,0,0.177475806159338,0.476872379894642,0.290692833264657,0,0.25384382367503,0.182927972872773,0,0.407412341537585,0,0.237270036248348,0.197008964751127,0,0.154936841185966,0.385813221962283,0.249810577937946,0.233931608445408,0.214871054048298,0,0.220591419119515,0.231867835620421
|short_description=p@chr4:11886091..11886093,-
}}

Revision as of 03:36, 14 September 2013

Short description:p@chr4:11886091..11886093, -
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_at_chr4:11886091..11886093, -
Coexpression cluster:MCL_coexpression_mm9:3453
Association with transcript: NA
EntrezGene:NA
Link to Zenbu:ZENBU


View on UCSC genome browser

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CAGE Expression

Sample

p@chr4:11886091..11886093-

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G70.48
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.00
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.00
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.00
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.26
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.99
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.00
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.17
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.09
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.33
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.00
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.00
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.27
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.00
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A31.36
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.10
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.00
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.00
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.00
GP2+ M cell, pool1.CNhs13228.11845-124H90.00
GP2+ M cell, pool2.CNhs13231.11846-124I10.00
GP2+ M cell, pool3.CNhs13240.11847-124I20.00
Ileum epithelium, pool1.CNhs13199.10252-104B90.00
Ileum epithelium, pool2.CNhs13232.10253-104C10.00
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.00
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.00
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.20
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D81.01
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.71
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B31.28
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.00
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C20.00
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B80.44
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C30.19
Mouse Astrocytes, donor2.CNhs12078.11552-120C40.00
Mouse Astrocytes, donor3.CNhs12107.11633-122C40.00
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.17
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.73
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.00
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.26
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.00
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C50.00
Mouse Granule cells, donor1.CNhs12131.11713-123C30.00
Mouse Granule cells, donor2.CNhs12357.11731-123E30.00
Mouse Granule cells, donor3.CNhs12108.11636-122C70.00
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.00
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.00
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.45
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.00
Mouse Microglia, donor1.CNhs12629.11718-123C80.00
Mouse Microglia, donor2.CNhs12634.11736-123E81.15
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D50.10
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F50.81
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D90.21
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F10.57
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D50.22
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D20.24
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F20.00
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D60.00
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D31.10
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F34.60
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D75.22
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D40.26
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F40.09
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D80.52
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E41.40
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E52.25
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I61.68
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D61.77
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F60.71
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E11.12
Mouse Schwann, donor1.CNhs12507.11728-123D90.38
Mouse Schwann, donor2.CNhs12573.11746-123F90.08
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G30.29
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.00
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.68
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.54
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.00
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.00
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A70.56
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I71.19
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E31.30
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.35
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G60.14
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H11.28
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.22
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.76
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.51
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B60.46
accessory axillary lymph node, adult.CNhs10475.1063-29H90.00
adrenal gland, adult.CNhs10508.49-24D70.45
adrenal gland, embryo E14.CNhs11038.406-44C50.17
adrenal gland, embryo E16.CNhs11004.1254-43D60.00
adrenal gland, embryo E17.CNhs11043.1263-45I10.69
adrenal gland, embryo E18.CNhs11026.1262-18F50.30
adrenal gland, neonate N00.CNhs11191.1311-23C10.71
adrenal gland, neonate N25.CNhs11223.1377-27I30.38
amnion, adult pregnant day17.5.CNhs10488.583-22A80.74
aorta, adult.CNhs10498.46-23H10.14
bone (os femoris), adult.CNhs10483.56-12G20.00
bone (os femoris), neonate N02.CNhs11227.1985-43F50.32
bone (os femoris), neonate N16.CNhs11225.1525-43A60.22
bone (os femoris), neonate N20.CNhs11195.1350-25C30.00
cecum, adult.CNhs10467.37-13H40.00
cerebellum, adult.CNhs10494.15-8B20.00
cerebellum, neonate N30.CNhs11135.1395-42I20.63
colon, adult.CNhs10468.36-18H70.00
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.12
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.25
corpora quadrigemina, adult.CNhs10501.16-22A41.35
corpus striatum, adult.CNhs10487.19-21D81.83
corpus striatum, neonate N00.CNhs11226.630-43F10.75
cortex, adult.CNhs10473.12-14D54.17
cortex, neonate N30.CNhs11107.1392-42F25.88
diencephalon, adult.CNhs10482.20-12F23.95
diencephalon, neonate N30.CNhs11201.1388-42B24.22
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B10.31
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A20.37
epididymis, adult.CNhs10490.58-23B20.25
eyeball, adult.CNhs10484.31-12G40.21
eyeball, embryo E12.CNhs11016.345-16C60.00
eyeball, embryo E14.CNhs10521.399-16E20.46
eyeball, embryo E15.CNhs10593.426-16C90.00
eyeball, embryo E17.CNhs11023.1261-18D40.60
eyeball, neonate N00.CNhs11207.633-15C60.14
eyeball, neonate N01.CNhs11140.1532-43E70.51
eyeball, neonate N02.CNhs11205.1551-44G80.56
eyeball, neonate N16.CNhs11188.777-19A20.26
forelimb, embryo E11.CNhs10596.335-25E20.00
forelimb, embryo E12.CNhs10600.359-14H20.38
forelimb, embryo E13.CNhs10589.384-1E20.00
forelimb, embryo E14.CNhs10577.413-26A80.00
forelimb, embryo E15.CNhs11007.437-20E70.56
forelimb, embryo E17.CNhs10598.1517-43C40.00
forelimb, embryo E18.CNhs11008.1520-43B50.41
gonad, embryo E13.CNhs11044.1564-45I60.80
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.00
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.85
heart, embryo E11.CNhs10586.331-24E90.00
heart, embryo E12.CNhs11015.353-12F50.94
heart, embryo E13.CNhs11013.376-3I90.00
heart, embryo E14.CNhs10597.403-26D40.00
heart, embryo E15.CNhs11017.431-16C80.39
heart, embryo E16.CNhs11021.457-17C60.62
heart, embryo E17.CNhs11025.479-18E50.47
heart, embryo E18.CNhs11030.1283-20G30.80
heart, neonate N00.CNhs11213.639-21E30.23
heart, neonate N03.CNhs11221.1349-25I20.49
heart, neonate N10.CNhs11118.749-24G10.82
heart, neonate N16.CNhs11209.782-15G10.32
heart, neonate N20.CNhs11127.821-26I60.29
heart, neonate N25.CNhs11196.1351-25D30.44
heart, neonate N30.CNhs11202.1390-42D20.40
hippocampus, adult.CNhs10478.13-16E80.63
hippocampus, neonate N00.CNhs11228.627-43G10.51
intestinal mucosa, adult.CNhs10506.860-29I30.00
intestine, adult.CNhs10496.178-9A30.26
intestine, embryo E12.CNhs11019.1251-16I50.21
intestine, embryo E13.CNhs11010.381-16D50.00
intestine, embryo E15.CNhs10602.976-16D80.00
intestine, embryo E16.CNhs10585.463-22H40.40
intestine, embryo E17.CNhs10582.482-18D30.22
intestine, embryo E18.CNhs10526.1289-20F70.00
intestine, neonate N00.CNhs11126.644-26D10.00
intestine, neonate N01.CNhs11192.1322-23E90.33
intestine, neonate N06.CNhs11102.688-20B80.75
intestine, neonate N07.CNhs11095.720-20F20.20
intestine, neonate N10.CNhs11098.755-23A50.00
intestine, neonate N20.CNhs11187.827-18D10.00
intestine, neonate N25.CNhs11121.1352-25E30.00
intestine, neonate N30.CNhs11131.1384-42G10.00
kidney, embryo E14.CNhs10606.411-4I90.19
kidney, embryo E15.CNhs10997.434-16F80.11
kidney, embryo E16.CNhs10584.464-22A50.00
kidney, embryo E17.CNhs11028.483-18I20.00
kidney, embryo E18.CNhs11001.1288-20C70.19
kidney, neonate N00.CNhs11214.646-21G70.28
kidney, neonate N10.CNhs11206.758-6D50.19
kidney, neonate N20.CNhs11113.832-19I10.44
kidney, neonate N25.CNhs11122.1353-25F30.78
kidney, neonate N30.CNhs11203.1385-42H10.25
liver, adult pregnant day01.CNhs10466.508-5B20.00
liver, embryo E12.CNhs10601.355-15F80.00
liver, embryo E13.CNhs10524.378-3H60.00
liver, embryo E14.CNhs10594.409-16E10.00
liver, embryo E15.CNhs10520.433-16D70.00
liver, embryo E16.CNhs10523.462-17F50.24
liver, embryo E17.CNhs10510.481-18A30.00
liver, embryo E18.CNhs10579.499-43G40.00
liver, neonate N00.CNhs11117.641-24F40.16
liver, neonate N03.CNhs11123.1345-25G20.27
liver, neonate N06.CNhs11101.684-20A80.00
liver, neonate N07.CNhs11103.716-20H20.00
liver, neonate N10.CNhs11115.751-24B90.00
liver, neonate N20.CNhs11220.823-25A30.00
liver, neonate N25.CNhs11198.1368-26H10.00
liver, neonate N30.CNhs11106.1382-42D10.00
lung, adult.CNhs10474.28-22B10.18
lung, embryo E12.CNhs10522.354-16G20.00
lung, embryo E14.CNhs10604.404-26F80.33
lung, embryo E15.CNhs11020.432-17C50.00
lung, embryo E16.CNhs10998.458-17B60.00
lung, embryo E17.CNhs10605.480-44A60.34
lung, embryo E18.CNhs10583.1287-20I60.24
lung, neonate N00.CNhs11224.640-42C60.20
lung, neonate N06.CNhs11212.683-20E50.00
lung, neonate N07.CNhs11111.715-19A30.44
lung, neonate N10.CNhs11219.750-23E60.16
lung, neonate N20.CNhs11109.822-18A40.98
lung, neonate N25.CNhs11119.1359-25C70.52
lung, neonate N30.CNhs11133.1394-42H21.30
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A13.02
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A11.63
mammary gland, adult lactating day02.CNhs10480.595-22B60.00
mammary gland, adult pregnant day19.CNhs10476.588-5H20.00
medulla oblongata, adult.CNhs10477.17-12C20.64
medulla oblongata, neonate N30.CNhs11200.1396-42A31.17
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C71.48
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C22.27
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E10.00
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E20.39
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E30.22
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D70.00
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D80.00
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D90.28
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D40.00
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D50.29
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D60.40
olfactory brain, adult.CNhs10489.18-22I90.32
ovary, adult.CNhs10507.91-2I70.14
ovary, embryo E18.CNhs11040.505-44H70.36
ovary, neonate N00.CNhs11217.1299-22I40.33
oviduct, adult pregnant day01.CNhs10500.988-6G60.16
pancreas, adult.CNhs10486.34-16E40.00
pancreas, embryo E14.CNhs11012.405-44F40.00
pancreas, embryo E15.CNhs11042.1556-45F20.30
pancreas, embryo E16.CNhs11003.460-26E50.00
pancreas, embryo E17.CNhs10599.1558-45G30.00
pancreas, embryo E18.CNhs10580.1535-43I70.31
pancreas, neonate N00.CNhs11105.645-26G90.00
pancreas, neonate N01.CNhs11138.1531-43D70.36
pancreas, neonate N02.CNhs11139.1539-43D80.36
pancreas, neonate N16.CNhs11136.787-43B60.32
pancreas, neonate N25.CNhs11094.1555-45E20.00
pancreas, neonate N30.CNhs11182.1548-44H50.00
pituitary gland, adult.CNhs10493.21-1G80.00
pituitary gland, embryo E12.CNhs11018.346-16E60.00
pituitary gland, embryo E13.CNhs11009.370-44C70.13
pituitary gland, embryo E14.CNhs11037.398-44A50.00
pituitary gland, embryo E15.CNhs10592.427-16B90.00
pituitary gland, embryo E16.CNhs11036.449-43F60.36
pituitary gland, embryo E17.CNhs11039.1265-44F50.82
pituitary gland, neonate N00.CNhs11190.1308-22E90.00
placenta, adult pregnant day10.CNhs10472.539-13I70.00
placenta, adult pregnant day17.CNhs10464.577-18G30.21
prostate, adult.CNhs10470.859-1F80.00
skin, adult.CNhs10492.30-1C30.16
skin, neonate N00.CNhs11124.650-25G40.48
skin, neonate N03.CNhs11215.662-22H30.06
skin, neonate N06.CNhs11097.693-20I50.48
skin, neonate N10.CNhs11108.762-6C40.00
small intestine, neonate N16.CNhs11114.790-21I10.00
spinal cord, adult.CNhs10505.24-13C91.11
spleen, adult.CNhs10465.25-2G20.17
spleen, embryo E16.CNhs11035.461-43C10.00
spleen, embryo E18.CNhs11011.1271-21F20.37
spleen, neonate N10.CNhs11116.752-24D10.38
spleen, neonate N20.CNhs11112.824-19H10.27
spleen, neonate N25.CNhs11099.1354-25G30.46
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.17
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.14
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.14
stomach, adult.CNhs10503.33-1H60.95
stomach, embryo E12.CNhs10588.356-43E30.00
stomach, embryo E15.CNhs10603.1252-16G80.00
stomach, embryo E16.CNhs11022.459-17D40.22
stomach, embryo E17.CNhs11006.1035-18D50.21
stomach, embryo E18.CNhs10999.1286-20C60.22
stomach, neonate N03.CNhs11193.1340-24B80.13
stomach, neonate N07.CNhs11210.718-18A90.17
stomach, neonate N25.CNhs11104.1355-25E40.79
stomach, neonate N30.CNhs11134.1386-42I10.00
submandibular gland, adult.CNhs10469.59-29C11.24
testis, adult.CNhs10504.57-7G50.00
testis, embryo E13.CNhs11031.389-23F50.45
testis, embryo E15.CNhs11034.443-27C50.83
testis, embryo E16.CNhs11033.470-26G50.78
testis, embryo E17.CNhs11029.486-18I50.65
testis, embryo E18.CNhs11027.503-18G50.51
testis, neonate N00.CNhs11189.1300-22B70.94
testis, neonate N07.CNhs11222.726-26I40.65
testis, neonate N10.CNhs11204.763-44D90.21
testis, neonate N20.CNhs11110.839-18H30.97
testis, neonate N30.CNhs11130.1391-42E20.58
thymus, adult.CNhs10471.38-12B50.32
thymus, embryo E14.CNhs11041.402-44I40.81
thymus, embryo E15.CNhs11005.430-45I20.10
thymus, embryo E16.CNhs11002.456-26C50.00
thymus, embryo E17.CNhs10581.478-18C10.00
thymus, embryo E18.CNhs10595.1273-19G40.00
thymus, neonate N02.CNhs11181.1541-43F80.24
thymus, neonate N03.CNhs11137.2104-43C70.00
thymus, neonate N06.CNhs11197.681-26C40.40
thymus, neonate N07.CNhs11211.713-19D30.08
thymus, neonate N10.CNhs11194.748-24E40.10
thymus, neonate N20.CNhs11186.820-7A20.10
thymus, neonate N25.CNhs11125.1362-25G70.48
thymus, neonate N30.CNhs11132.1393-42G20.47
tongue, adult.CNhs10499.32-1B40.91
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.00
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.00
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.00
urinary bladder, adult.CNhs10481.879-12E40.19
uterus, adult pregnant day19.CNhs10497.590-15F50.00
uterus, adult.CNhs10509.92-27E50.18
vagina, adult.CNhs10502.89-27D50.21
vesicular gland, adult.CNhs10491.51-27F82.51
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A10.56
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A21.84
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A30.00
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D74.12
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A44.80
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A53.02
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A64.05
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A70.45
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A84.53
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A94.14
whole body, embryo E11.CNhs11014.324-5I80.42
whole body, embryo E12.CNhs10587.857-27C90.00
whole body, embryo E13.CNhs10512.372-23H20.85
whole body, embryo E14.5.CNhs10578.420-27D20.49
whole body, embryo E14.CNhs10519.395-14B10.21
whole body, embryo E16.CNhs10514.453-14F20.18
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G50.21
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G50.32
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G50.76
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G50.25
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G50.19
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G50.47
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G50.06
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G50.46
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G50.48
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G50.35
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G50.39
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G50.44
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G50.18
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G50.48
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G50.29
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G50.25
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G50.18
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G50.41
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G50.24
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G50.20
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G50.15
whole body, embryo E17.5.CNhs10513.490-9F90.39
whole body, embryo E17.CNhs10517.475-3I50.25
whole body, embryo E18.CNhs10516.493-3B30.23
whole body, neonate N00.CNhs10525.657-19C20.21
whole body, neonate N01.CNhs10576.659-23C60.00
whole body, neonate N06.CNhs10515.692-21D10.22
whole body, neonate N10.CNhs10518.761-6B40.23





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen
raphe nuclei neuron1.96e-083
neuron of the substantia nigra5.13e-083

Uber anatomy
Ontology termp-valuen
regional part of nervous system2.43e-1654
neural tube2.12e-1352
neural rod2.12e-1352
future spinal cord2.12e-1352
neural keel2.12e-1352
central nervous system2.94e-1373
nervous system9.21e-1375
occipital lobe1.59e-1210
visual cortex1.59e-1210
neocortex1.59e-1210
gray matter6.40e-1234
anterior neural tube1.71e-1140
regional part of brain6.51e-1146
brain grey matter1.22e-1029
regional part of telencephalon1.22e-1029
telencephalon1.22e-1029
brain1.33e-1047
future brain1.33e-1047
regional part of forebrain2.82e-1039
forebrain2.82e-1039
future forebrain2.82e-1039
neurectoderm4.62e-1064
neural plate4.62e-1064
presumptive neural plate4.62e-1064
regional part of midbrain5.05e-104
midbrain5.05e-104
presumptive midbrain5.05e-104
midbrain neural tube5.05e-104
ectoderm-derived structure5.81e-1095
ectoderm5.81e-1095
presumptive ectoderm5.81e-1095
pre-chordal neural plate9.45e-0949
raphe nuclei1.96e-083
reticular formation1.96e-083
ecto-epithelium2.73e-0873
substantia nigra5.13e-083
telencephalic nucleus5.13e-083
midbrain nucleus5.13e-083
neural nucleus5.13e-083
nucleus of brain5.13e-083
cerebral cortex4.98e-0721
cerebral hemisphere4.98e-0721
pallium4.98e-0721
regional part of cerebral cortex6.68e-0717







Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process. Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process. Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.

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