FFCP PHASE1:Mm9::chr10:72117621..72117668,+: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=52696|HGNC=|MCL_coexpression_id=1|UniProt=Q9CQU5|association_with_transcript=0bp_to_ENSMUST00000105431,ENSMUST00000160337,NM_025635,uc007foy.1,uc007foz.1,uc007fpa.1_5end|description=CAGE_peak_1_at_Zwint_5end|id=chr10:72117621..72117668,+|ontology_enrichment_celltype=CL:0000117!8.31e-08!23;CL:0000337!8.31e-08!23|ontology_enrichment_celltype_v019_2=CL:0000117,8.31e-08,23;CL:0000337,8.31e-08,23|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002346!1.82e-21!71;UBERON:0003075!1.82e-21!71;UBERON:0007284!1.82e-21!71;UBERON:0000033!4.61e-18!63;UBERON:0001049!1.07e-17!52;UBERON:0005068!1.07e-17!52;UBERON:0006241!1.07e-17!52;UBERON:0007135!1.07e-17!52;UBERON:0000955!1.02e-16!50;UBERON:0006238!1.02e-16!50;UBERON:0003056!1.10e-16!49;UBERON:0002616!3.83e-16!49;UBERON:0000073!1.82e-14!75;UBERON:0001016!1.82e-14!75;UBERON:0004121!3.42e-14!102;UBERON:0000924!3.42e-14!102;UBERON:0006601!3.42e-14!102;UBERON:0003080!5.20e-14!40;UBERON:0001017!5.76e-14!73;UBERON:0005743!5.76e-14!73;UBERON:0002780!2.44e-13!39;UBERON:0001890!2.44e-13!39;UBERON:0006240!2.44e-13!39;UBERON:0007811!1.49e-12!86;UBERON:0002020!4.97e-12!34;UBERON:0000153!2.97e-11!94;UBERON:0002791!1.53e-09!29;UBERON:0003528!1.53e-09!29;UBERON:0001893!1.53e-09!29;UBERON:0000025!4.83e-09!114;UBERON:0004111!1.24e-07!122;UBERON:0002021!2.71e-07!10;UBERON:0000411!2.71e-07!10;UBERON:0001950!2.71e-07!10|ontology_enrichment_uberon_v019_2=UBERON:0002346,1.28e-19,64;UBERON:0003075,1.28e-19,64;UBERON:0007284,1.28e-19,64;UBERON:0010314,6.66e-19,92;UBERON:0000073,7.42e-19,54;UBERON:0001049,1.07e-17,52;UBERON:0005068,1.07e-17,52;UBERON:0006241,1.07e-17,52;UBERON:0007135,1.07e-17,52;UBERON:0003056,1.10e-16,49;UBERON:0010371,5.55e-15,73;UBERON:0000955,6.10e-15,47;UBERON:0006238,6.10e-15,47;UBERON:0001016,1.82e-14,75;UBERON:0002616,2.20e-14,46;UBERON:0003080,5.20e-14,40;UBERON:0001017,5.76e-14,73;UBERON:0002780,2.44e-13,39;UBERON:0001890,2.44e-13,39;UBERON:0006240,2.44e-13,39;UBERON:0004121,2.04e-12,95;UBERON:0000924,2.04e-12,95;UBERON:0006601,2.04e-12,95;UBERON:0002020,4.97e-12,34;UBERON:0003528,1.53e-09,29;UBERON:0002791,1.53e-09,29;UBERON:0001893,1.53e-09,29;UBERON:0000025,4.83e-09,114;UBERON:0004111,1.24e-07,122;UBERON:0002021,2.71e-07,10;UBERON:0000411,2.71e-07,10;UBERON:0001950,2.71e-07,10|phase1_expression=95.608861721562,17.4487703819681,24.5699589270349,11.4936400296595,9.01612313903425,36.597681276792,34.5746708081378,62.1083185753982,69.690417465075,67.4105835807341,100.847383284822,89.0257294387954,50.1618138698433,50.7912538054375,42.3049397505892,90.9113950580319,114.028586134888,28.3915948822414,30.439404260474,25.4633791078818,162.347640898392,79.7306338143109,78.0987369525417,34.3983709005824,38.0819406571502,22.3950466004858,27.9995297503399,35.1218109277999,22.8028103347649,24.4469225867133,47.8937903015458,76.8387114886154,54.7407660950267,15.8481681015439,36.6841557084119,37.7352644963778,35.933806702177,40.1790365507431,34.3787551590472,47.1171369576418,29.9998058895817,25.2726829434625,23.3044969454954,158.252300195301,158.553520427321,142.799373181788,16.4302182313088,35.1020501772519,38.664768161267,38.4971200167081,28.6972164331993,20.125359011096,37.9188689690484,47.1485392307374,48.0614132773724,71.2608637819573,41.260815351181,75.2881254725066,132.112648941317,97.334340186054,99.5115303504701,24.7356508410466,11.5608323494448,5.84934816232909,2.96659908770092,7.104801149461,8.08920298399693,14.6002956022191,70.9236948189987,59.2676069276122,72.9827615889296,218.808654053314,247.372765865807,83.5387250645987,77.1556041696803,35.8495326777908,202.613221038875,474.103086310302,527.024015602171,156.54902353574,179.041318529916,179.715112842082,429.941818462127,595.965604023549,480.397691010291,228.337153742092,308.661803972455,148.001159985289,86.8579437531621,106.329185070247,63.4803230256674,57.6483997577529,33.9985666853875,25.3660500069774,33.7883737072788,38.5303122903709,61.6551004378391,91.1802225792609,88.0674555603725,69.2545566040267,90.4214754966289,83.4122103193066,71.3454671178608,35.5533351576666,58.4525810730278,60.5530078485486,45.4972000513305,80.4996352019373,30.0367945030719,86.6902092138577,108.601814555601,105.953986452625,107.005590726811,131.882310483545,116.295231357212,63.2102954388268,79.1023896749996,48.4407845681704,53.9612436689423,50.6330240335391,35.334642953663,47.5177748072518,24.2309289583559,210.216612254291,237.303118819645,21.7138496927303,105.557124689716,58.1905649063605,89.4574398594375,722.14067257065,492.270648632842,205.696174408759,533.988311630673,500.690865452787,659.727041476603,547.72650411675,64.056959861849,47.8966836848858,102.858162682506,76.811277398563,135.845742453063,119.319192200972,111.818582609122,106.096191756343,97.7684492804581,116.199144298359,96.044267673722,119.262253910686,76.0955015052933,79.0463415101485,70.9083030380714,65.3203282634173,65.6191508172411,43.5315208152708,38.2754773718775,93.9441739383288,60.3903341089382,76.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| ||
|EntrezGene=52696 | |||
|HGNC= | |||
|MCL_coexpression_id=1 | |||
|UniProt=Q9CQU5 | |||
|association_with_transcript=0bp_to_ENSMUST00000105431,ENSMUST00000160337,NM_025635,uc007foy.1,uc007foz.1,uc007fpa.1_5end | |||
|description=CAGE_peak_1_at_Zwint_5end | |||
|id=chr10:72117621..72117668,+ | |||
|ontology_enrichment_celltype=CL:0000117!8.31e-08!23;CL:0000337!8.31e-08!23 | |||
|ontology_enrichment_celltype_v019_2=CL:0000117,8.31e-08,23;CL:0000337,8.31e-08,23 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002346!1.82e-21!71;UBERON:0003075!1.82e-21!71;UBERON:0007284!1.82e-21!71;UBERON:0000033!4.61e-18!63;UBERON:0001049!1.07e-17!52;UBERON:0005068!1.07e-17!52;UBERON:0006241!1.07e-17!52;UBERON:0007135!1.07e-17!52;UBERON:0000955!1.02e-16!50;UBERON:0006238!1.02e-16!50;UBERON:0003056!1.10e-16!49;UBERON:0002616!3.83e-16!49;UBERON:0000073!1.82e-14!75;UBERON:0001016!1.82e-14!75;UBERON:0004121!3.42e-14!102;UBERON:0000924!3.42e-14!102;UBERON:0006601!3.42e-14!102;UBERON:0003080!5.20e-14!40;UBERON:0001017!5.76e-14!73;UBERON:0005743!5.76e-14!73;UBERON:0002780!2.44e-13!39;UBERON:0001890!2.44e-13!39;UBERON:0006240!2.44e-13!39;UBERON:0007811!1.49e-12!86;UBERON:0002020!4.97e-12!34;UBERON:0000153!2.97e-11!94;UBERON:0002791!1.53e-09!29;UBERON:0003528!1.53e-09!29;UBERON:0001893!1.53e-09!29;UBERON:0000025!4.83e-09!114;UBERON:0004111!1.24e-07!122;UBERON:0002021!2.71e-07!10;UBERON:0000411!2.71e-07!10;UBERON:0001950!2.71e-07!10 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002346,1.28e-19,64;UBERON:0003075,1.28e-19,64;UBERON:0007284,1.28e-19,64;UBERON:0010314,6.66e-19,92;UBERON:0000073,7.42e-19,54;UBERON:0001049,1.07e-17,52;UBERON:0005068,1.07e-17,52;UBERON:0006241,1.07e-17,52;UBERON:0007135,1.07e-17,52;UBERON:0003056,1.10e-16,49;UBERON:0010371,5.55e-15,73;UBERON:0000955,6.10e-15,47;UBERON:0006238,6.10e-15,47;UBERON:0001016,1.82e-14,75;UBERON:0002616,2.20e-14,46;UBERON:0003080,5.20e-14,40;UBERON:0001017,5.76e-14,73;UBERON:0002780,2.44e-13,39;UBERON:0001890,2.44e-13,39;UBERON:0006240,2.44e-13,39;UBERON:0004121,2.04e-12,95;UBERON:0000924,2.04e-12,95;UBERON:0006601,2.04e-12,95;UBERON:0002020,4.97e-12,34;UBERON:0003528,1.53e-09,29;UBERON:0002791,1.53e-09,29;UBERON:0001893,1.53e-09,29;UBERON:0000025,4.83e-09,114;UBERON:0004111,1.24e-07,122;UBERON:0002021,2.71e-07,10;UBERON:0000411,2.71e-07,10;UBERON:0001950,2.71e-07,10 | |||
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| |||
|short_description=p1@Zwint | |||
}} |
Revision as of 17:18, 12 September 2013
Short description: | p1@Zwint |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Zwint_5end |
Coexpression cluster: | MCL_coexpression_mm9:1 |
Association with transcript: | 0bp_to_ENSMUST00000105431, ENSMUST00000160337, NM_025635, uc007foy.1, uc007foz.1, uc007fpa.1_5end |
EntrezGene: | Zwint |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 8.31e-08 | 23 |
neuroblast (sensu Vertebrata) | 8.31e-08 | 23 |
Ontology term | p-value | n |
---|---|---|
neurectoderm | 1.28e-19 | 64 |
neural plate | 1.28e-19 | 64 |
presumptive neural plate | 1.28e-19 | 64 |
structure with developmental contribution from neural crest | 6.66e-19 | 92 |
regional part of nervous system | 7.42e-19 | 54 |
neural tube | 1.07e-17 | 52 |
neural rod | 1.07e-17 | 52 |
future spinal cord | 1.07e-17 | 52 |
neural keel | 1.07e-17 | 52 |
pre-chordal neural plate | 1.10e-16 | 49 |
ecto-epithelium | 5.55e-15 | 73 |
brain | 6.10e-15 | 47 |
future brain | 6.10e-15 | 47 |
nervous system | 1.82e-14 | 75 |
regional part of brain | 2.20e-14 | 46 |
anterior neural tube | 5.20e-14 | 40 |
central nervous system | 5.76e-14 | 73 |
regional part of forebrain | 2.44e-13 | 39 |
forebrain | 2.44e-13 | 39 |
future forebrain | 2.44e-13 | 39 |
ectoderm-derived structure | 2.04e-12 | 95 |
ectoderm | 2.04e-12 | 95 |
presumptive ectoderm | 2.04e-12 | 95 |
gray matter | 4.97e-12 | 34 |
brain grey matter | 1.53e-09 | 29 |
regional part of telencephalon | 1.53e-09 | 29 |
telencephalon | 1.53e-09 | 29 |
tube | 4.83e-09 | 114 |
anatomical conduit | 1.24e-07 | 122 |
occipital lobe | 2.71e-07 | 10 |
visual cortex | 2.71e-07 | 10 |
neocortex | 2.71e-07 | 10 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.