FFCP PHASE1:Mm9::chr5:115879504..115879518,-: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=57|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr5:115879504..115879518,-|id=chr5:115879504..115879518,-|ontology_enrichment_celltype=CL:0000221!3.68e-14!44;CL:0000133!3.68e-14!44;CL:0002319!1.93e-13!43;CL:0000117!3.57e-11!23;CL:0000337!3.57e-11!23;CL:0000540!5.78e-11!33;CL:0000047!5.78e-11!33;CL:0000031!5.78e-11!33;CL:0000404!5.78e-11!33;CL:0000055!1.67e-09!50;CL:0000393!1.44e-07!39;CL:0000211!1.44e-07!39;CL:0002321!3.63e-07!70;CL:0000220!3.63e-07!70|ontology_enrichment_celltype_v019_2=CL:0000221,1.55e-14,44;CL:0000133,1.55e-14,44;CL:0002319,1.95e-13,43;CL:0000117,6.57e-11,23;CL:0000337,6.57e-11,23;CL:0000540,1.03e-09,33;CL:0000047,1.03e-09,33;CL:0000031,1.03e-09,33;CL:0000404,1.03e-09,33;CL:0002321,4.67e-09,70;CL:0002609,4.07e-08,6;CL:0000393,1.65e-07,39;CL:0000211,1.65e-07,39|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0004121!6.38e-25!102;UBERON:0000924!6.38e-25!102;UBERON:0006601!6.38e-25!102;UBERON:0001017!2.44e-24!73;UBERON:0005743!2.44e-24!73;UBERON:0000033!5.18e-24!63;UBERON:0000073!1.49e-23!75;UBERON:0001016!1.49e-23!75;UBERON:0002346!4.68e-21!71;UBERON:0003075!4.68e-21!71;UBERON:0007284!4.68e-21!71;UBERON:0003056!1.65e-20!49;UBERON:0001049!2.19e-18!52;UBERON:0005068!2.19e-18!52;UBERON:0006241!2.19e-18!52;UBERON:0007135!2.19e-18!52;UBERON:0000955!7.15e-17!50;UBERON:0006238!7.15e-17!50;UBERON:0002616!9.21e-17!49;UBERON:0003080!1.71e-13!40;UBERON:0002780!2.54e-13!39;UBERON:0001890!2.54e-13!39;UBERON:0006240!2.54e-13!39;UBERON:0000153!2.60e-13!94;UBERON:0007811!5.02e-13!86;UBERON:0002020!2.14e-09!34;UBERON:0000020!8.52e-09!12;UBERON:0001032!8.52e-09!12;UBERON:0004456!8.52e-09!12;UBERON:0000970!9.42e-09!9;UBERON:0000019!9.42e-09!9;UBERON:0000047!9.42e-09!9;UBERON:0004088!9.42e-09!9;UBERON:0002104!9.42e-09!9;UBERON:0001456!9.42e-09!9;UBERON:0003072!9.42e-09!9;UBERON:0003071!9.42e-09!9;UBERON:0004128!9.42e-09!9;UBERON:0001894!9.33e-08!10;UBERON:0006222!9.33e-08!10;UBERON:0005085!1.06e-07!13;UBERON:0002791!1.55e-07!29;UBERON:0003528!1.55e-07!29;UBERON:0001893!1.55e-07!29;UBERON:0000007!9.59e-07!8;UBERON:0003296!9.59e-07!8;UBERON:0010133!9.59e-07!8|ontology_enrichment_uberon_v019_2=UBERON:0002346,5.52e-33,64;UBERON:0003075,5.52e-33,64;UBERON:0007284,5.52e-33,64;UBERON:0004121,3.41e-32,95;UBERON:0000924,3.41e-32,95;UBERON:0006601,3.41e-32,95;UBERON:0010371,5.85e-31,73;UBERON:0003056,1.96e-27,49;UBERON:0001017,3.71e-25,73;UBERON:0001016,3.61e-24,75;UBERON:0010314,5.98e-22,92;UBERON:0000073,4.39e-21,54;UBERON:0001049,4.48e-21,52;UBERON:0005068,4.48e-21,52;UBERON:0006241,4.48e-21,52;UBERON:0007135,4.48e-21,52;UBERON:0002616,1.48e-18,46;UBERON:0000955,5.53e-18,47;UBERON:0006238,5.53e-18,47;UBERON:0002780,3.08e-16,39;UBERON:0001890,3.08e-16,39;UBERON:0006240,3.08e-16,39;UBERON:0000020,4.53e-16,12;UBERON:0001032,4.53e-16,12;UBERON:0004456,4.53e-16,12;UBERON:0003080,1.18e-15,40;UBERON:0000970,2.96e-15,9;UBERON:0000019,2.96e-15,9;UBERON:0000047,2.96e-15,9;UBERON:0010312,2.96e-15,9;UBERON:0004088,2.96e-15,9;UBERON:0002104,2.96e-15,9;UBERON:0001456,2.96e-15,9;UBERON:0003072,2.96e-15,9;UBERON:0004128,2.96e-15,9;UBERON:0003071,2.96e-15,9;UBERON:0000033,1.40e-14,13;UBERON:0005085,1.40e-14,13;UBERON:0001894,2.31e-13,10;UBERON:0006222,2.31e-13,10;UBERON:0001444,5.08e-12,11;UBERON:0000007,1.91e-11,8;UBERON:0003296,1.91e-11,8;UBERON:0010133,1.91e-11,8;UBERON:0002020,2.79e-08,34;UBERON:0000483,9.71e-08,174;UBERON:0000119,1.63e-07,176;UBERON:0003528,5.17e-07,29;UBERON:0002791,5.17e-07,29;UBERON:0001893,5.17e-07,29;UBERON:0001954,5.19e-07,7;UBERON:0003022,5.19e-07,7;UBERON:0002421,5.19e-07,7;UBERON:0000349,5.19e-07,7;UBERON:0002600,5.19e-07,7|phase1_expression=1.92178616525753,0,0,0,0,1.6787927191189,0.934450562382103,0,0,0,0,0,0,0,0,0,0,0,0,0,0.255129870453209,0,0,0,0,0,0.430761996159075,0.215471232685889,0,0.252030129759931,0,0,0,0,1.1554064790051,0.664938581433969,2.85837098767317,0,0,0,0,0,0,0,0,0,0,4.14247797122848,1.75748946187577,1.94429899074283,0.55994568650145,1.43752564364972,0,0,0,0,0,0,2.63011399117477,2.11596391708813,0.633831403506179,0,0,0,0,0,3.29560121570245,13.831858991576,3.11068836925433,1.4850653216486,1.26194976810829,1.14260393761521,0.441737081903227,1.46988959057945,1.82106394934649,4.5960939330501,1.10115880999389,1.14918604276669,0.46081959976873,1.05509030184155,1.82975287204819,0.52091337055676,0.279182999001381,1.12552522006336,0.61119299110724,0.883885756421003,1.13897344639282,1.4911955666024,0.075726193333184,0,0.289864488701678,0,0,0,0,0,0.421333260395256,0,0,0,10.9857867425811,0,0,0,0,0,0,0,0.258937883647172,0,0.173485326766136,0,0,0,0.117588707135705,0,0,0,0,0.161766849947409,0.662524555381181,0.484875253135222,0,2.34224637609238,1.46612694769419,0,0,0,0,0.449371918214468,3.20250421973039,1.00523481690292,0.521472960576829,0.511430914660661,2.0778804455956,1.1356888414743,0.101839363850316,0.497627882440372,0,12.416069497302,5.72529949035896,10.3455946995063,7.56260945182467,13.7141384230501,18.0977087742532,23.060469651273,18.4592397382666,38.0293954986353,0.862271971731369,0,0.351902248327898,0,0.278047249225598,0.348252166522167,0.205782136407943,0.199034266818493,0,0,0,0,0,0.180062061461015,0,0,0,0,0,0,0,0,0,0,0,0,2.52347938276953,0.823236899034275,0,0,0,0,0,0,0,0,0,0.164698954724011,0,0.198956472041151,0.19496408711912,0,0,0,0.189667900953082,0.571242563048644,0,0,0.193952487167626,0,0.0632365371242573,0,0,0,0,0,0,0,0,0,0.25462585178142,0,0,0,0,0,0,0,0,0,0,0,0,0.169745085775188,0,0,0,0,0,0.221464689648775,0,0,0,0,0,0,0,0,2.0871576698413,0.703270119553219,0,0,0,0,1.50796378412959,0.238968797952552,0.445597348164788,0,1.21443210502468,0.292255857911312,0.790575555893047,0.321321316421807,0.283880170416537,0,0.325773918707152,0.164970122972535,0,0,0,0,0,0,0,0,0,0,0,0,2.7235168460303,4.50152735078276,4.01011919726539,4.50107773566344,2.6601035046341,1.07021290561242,3.45552943264454,2.13125464380219,0,0,0,0.16488625294148,0,0.0603129249281559,0.119372344003136,0.328281799490123,0,2.59595422814714,0,0,0,0,0,0,0,0,0,0,0.474503990371703,0,0,0,0.218362563746178,0,0,0,0,0,0,0.149516546043979,0,0.194451188344048,0.387479470433193,0.168956125490778,0.469428954583016,1.0416350787516,1.67774951081137,0.483168241652012,0,0,0,0,0,0,0,0.120195449519969,0,0.201932899896295,0,0,0.0974578807397524,0.0962118416403295,0,0,0,0,0,0,0,0,0,0,0,0.460325236507177,0,0.171853182343688,0,0.755393897389701,1.35004500046361,0.45032120322422,0,0,2.59468368960442,3.99024873401031,1.53660245178721,0.972426868273176,0,0.551530525350042,0.222246727801615,0.618105171716683,0.320919209591815,0.252697211763798,0.50695859978048,0.943131706930381,0.749132059759059,1.08842759088278,0.574354689556133,0.476293691283074,0.695305955669133,0.38581844092741,0,0.883193520806384,0.685738504770831,0.532427418478012,0.953744759789284,1.0174249164263,0.470546902076653,0.592302255241736,0.548783918618318,1.05227884575137,0.950628796921032,0,0.593175090620871,0.394017929502254,1.22769312950907,0.464810523557898,0.385813221962283,1.74867404556562,0.701794825336225,0.429742108096597,0.57386499620653,0.220591419119515,0.463735671240843|short_description=p@chr5:115879504..115879518,-}} | ||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=57 | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr5:115879504..115879518,- | |||
|id=chr5:115879504..115879518,- | |||
|ontology_enrichment_celltype=CL:0000221!3.68e-14!44;CL:0000133!3.68e-14!44;CL:0002319!1.93e-13!43;CL:0000117!3.57e-11!23;CL:0000337!3.57e-11!23;CL:0000540!5.78e-11!33;CL:0000047!5.78e-11!33;CL:0000031!5.78e-11!33;CL:0000404!5.78e-11!33;CL:0000055!1.67e-09!50;CL:0000393!1.44e-07!39;CL:0000211!1.44e-07!39;CL:0002321!3.63e-07!70;CL:0000220!3.63e-07!70 | |||
|ontology_enrichment_celltype_v019_2=CL:0000221,1.55e-14,44;CL:0000133,1.55e-14,44;CL:0002319,1.95e-13,43;CL:0000117,6.57e-11,23;CL:0000337,6.57e-11,23;CL:0000540,1.03e-09,33;CL:0000047,1.03e-09,33;CL:0000031,1.03e-09,33;CL:0000404,1.03e-09,33;CL:0002321,4.67e-09,70;CL:0002609,4.07e-08,6;CL:0000393,1.65e-07,39;CL:0000211,1.65e-07,39 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004121!6.38e-25!102;UBERON:0000924!6.38e-25!102;UBERON:0006601!6.38e-25!102;UBERON:0001017!2.44e-24!73;UBERON:0005743!2.44e-24!73;UBERON:0000033!5.18e-24!63;UBERON:0000073!1.49e-23!75;UBERON:0001016!1.49e-23!75;UBERON:0002346!4.68e-21!71;UBERON:0003075!4.68e-21!71;UBERON:0007284!4.68e-21!71;UBERON:0003056!1.65e-20!49;UBERON:0001049!2.19e-18!52;UBERON:0005068!2.19e-18!52;UBERON:0006241!2.19e-18!52;UBERON:0007135!2.19e-18!52;UBERON:0000955!7.15e-17!50;UBERON:0006238!7.15e-17!50;UBERON:0002616!9.21e-17!49;UBERON:0003080!1.71e-13!40;UBERON:0002780!2.54e-13!39;UBERON:0001890!2.54e-13!39;UBERON:0006240!2.54e-13!39;UBERON:0000153!2.60e-13!94;UBERON:0007811!5.02e-13!86;UBERON:0002020!2.14e-09!34;UBERON:0000020!8.52e-09!12;UBERON:0001032!8.52e-09!12;UBERON:0004456!8.52e-09!12;UBERON:0000970!9.42e-09!9;UBERON:0000019!9.42e-09!9;UBERON:0000047!9.42e-09!9;UBERON:0004088!9.42e-09!9;UBERON:0002104!9.42e-09!9;UBERON:0001456!9.42e-09!9;UBERON:0003072!9.42e-09!9;UBERON:0003071!9.42e-09!9;UBERON:0004128!9.42e-09!9;UBERON:0001894!9.33e-08!10;UBERON:0006222!9.33e-08!10;UBERON:0005085!1.06e-07!13;UBERON:0002791!1.55e-07!29;UBERON:0003528!1.55e-07!29;UBERON:0001893!1.55e-07!29;UBERON:0000007!9.59e-07!8;UBERON:0003296!9.59e-07!8;UBERON:0010133!9.59e-07!8 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002346,5.52e-33,64;UBERON:0003075,5.52e-33,64;UBERON:0007284,5.52e-33,64;UBERON:0004121,3.41e-32,95;UBERON:0000924,3.41e-32,95;UBERON:0006601,3.41e-32,95;UBERON:0010371,5.85e-31,73;UBERON:0003056,1.96e-27,49;UBERON:0001017,3.71e-25,73;UBERON:0001016,3.61e-24,75;UBERON:0010314,5.98e-22,92;UBERON:0000073,4.39e-21,54;UBERON:0001049,4.48e-21,52;UBERON:0005068,4.48e-21,52;UBERON:0006241,4.48e-21,52;UBERON:0007135,4.48e-21,52;UBERON:0002616,1.48e-18,46;UBERON:0000955,5.53e-18,47;UBERON:0006238,5.53e-18,47;UBERON:0002780,3.08e-16,39;UBERON:0001890,3.08e-16,39;UBERON:0006240,3.08e-16,39;UBERON:0000020,4.53e-16,12;UBERON:0001032,4.53e-16,12;UBERON:0004456,4.53e-16,12;UBERON:0003080,1.18e-15,40;UBERON:0000970,2.96e-15,9;UBERON:0000019,2.96e-15,9;UBERON:0000047,2.96e-15,9;UBERON:0010312,2.96e-15,9;UBERON:0004088,2.96e-15,9;UBERON:0002104,2.96e-15,9;UBERON:0001456,2.96e-15,9;UBERON:0003072,2.96e-15,9;UBERON:0004128,2.96e-15,9;UBERON:0003071,2.96e-15,9;UBERON:0000033,1.40e-14,13;UBERON:0005085,1.40e-14,13;UBERON:0001894,2.31e-13,10;UBERON:0006222,2.31e-13,10;UBERON:0001444,5.08e-12,11;UBERON:0000007,1.91e-11,8;UBERON:0003296,1.91e-11,8;UBERON:0010133,1.91e-11,8;UBERON:0002020,2.79e-08,34;UBERON:0000483,9.71e-08,174;UBERON:0000119,1.63e-07,176;UBERON:0003528,5.17e-07,29;UBERON:0002791,5.17e-07,29;UBERON:0001893,5.17e-07,29;UBERON:0001954,5.19e-07,7;UBERON:0003022,5.19e-07,7;UBERON:0002421,5.19e-07,7;UBERON:0000349,5.19e-07,7;UBERON:0002600,5.19e-07,7 | |||
|phase1_expression=1.92178616525753,0,0,0,0,1.6787927191189,0.934450562382103,0,0,0,0,0,0,0,0,0,0,0,0,0,0.255129870453209,0,0,0,0,0,0.430761996159075,0.215471232685889,0,0.252030129759931,0,0,0,0,1.1554064790051,0.664938581433969,2.85837098767317,0,0,0,0,0,0,0,0,0,0,4.14247797122848,1.75748946187577,1.94429899074283,0.55994568650145,1.43752564364972,0,0,0,0,0,0,2.63011399117477,2.11596391708813,0.633831403506179,0,0,0,0,0,3.29560121570245,13.831858991576,3.11068836925433,1.4850653216486,1.26194976810829,1.14260393761521,0.441737081903227,1.46988959057945,1.82106394934649,4.5960939330501,1.10115880999389,1.14918604276669,0.46081959976873,1.05509030184155,1.82975287204819,0.52091337055676,0.279182999001381,1.12552522006336,0.61119299110724,0.883885756421003,1.13897344639282,1.4911955666024,0.075726193333184,0,0.289864488701678,0,0,0,0,0,0.421333260395256,0,0,0,10.9857867425811,0,0,0,0,0,0,0,0.258937883647172,0,0.173485326766136,0,0,0,0.117588707135705,0,0,0,0,0.161766849947409,0.662524555381181,0.484875253135222,0,2.34224637609238,1.46612694769419,0,0,0,0,0.449371918214468,3.20250421973039,1.00523481690292,0.521472960576829,0.511430914660661,2.0778804455956,1.1356888414743,0.101839363850316,0.497627882440372,0,12.416069497302,5.72529949035896,10.3455946995063,7.56260945182467,13.7141384230501,18.0977087742532,23.060469651273,18.4592397382666,38.0293954986353,0.862271971731369,0,0.351902248327898,0,0.278047249225598,0.348252166522167,0.205782136407943,0.199034266818493,0,0,0,0,0,0.180062061461015,0,0,0,0,0,0,0,0,0,0,0,0,2.52347938276953,0.823236899034275,0,0,0,0,0,0,0,0,0,0.164698954724011,0,0.198956472041151,0.19496408711912,0,0,0,0.189667900953082,0.571242563048644,0,0,0.193952487167626,0,0.0632365371242573,0,0,0,0,0,0,0,0,0,0.25462585178142,0,0,0,0,0,0,0,0,0,0,0,0,0.169745085775188,0,0,0,0,0,0.221464689648775,0,0,0,0,0,0,0,0,2.0871576698413,0.703270119553219,0,0,0,0,1.50796378412959,0.238968797952552,0.445597348164788,0,1.21443210502468,0.292255857911312,0.790575555893047,0.321321316421807,0.283880170416537,0,0.325773918707152,0.164970122972535,0,0,0,0,0,0,0,0,0,0,0,0,2.7235168460303,4.50152735078276,4.01011919726539,4.50107773566344,2.6601035046341,1.07021290561242,3.45552943264454,2.13125464380219,0,0,0,0.16488625294148,0,0.0603129249281559,0.119372344003136,0.328281799490123,0,2.59595422814714,0,0,0,0,0,0,0,0,0,0,0.474503990371703,0,0,0,0.218362563746178,0,0,0,0,0,0,0.149516546043979,0,0.194451188344048,0.387479470433193,0.168956125490778,0.469428954583016,1.0416350787516,1.67774951081137,0.483168241652012,0,0,0,0,0,0,0,0.120195449519969,0,0.201932899896295,0,0,0.0974578807397524,0.0962118416403295,0,0,0,0,0,0,0,0,0,0,0,0.460325236507177,0,0.171853182343688,0,0.755393897389701,1.35004500046361,0.45032120322422,0,0,2.59468368960442,3.99024873401031,1.53660245178721,0.972426868273176,0,0.551530525350042,0.222246727801615,0.618105171716683,0.320919209591815,0.252697211763798,0.50695859978048,0.943131706930381,0.749132059759059,1.08842759088278,0.574354689556133,0.476293691283074,0.695305955669133,0.38581844092741,0,0.883193520806384,0.685738504770831,0.532427418478012,0.953744759789284,1.0174249164263,0.470546902076653,0.592302255241736,0.548783918618318,1.05227884575137,0.950628796921032,0,0.593175090620871,0.394017929502254,1.22769312950907,0.464810523557898,0.385813221962283,1.74867404556562,0.701794825336225,0.429742108096597,0.57386499620653,0.220591419119515,0.463735671240843 | |||
|short_description=p@chr5:115879504..115879518,- | |||
}} |
Revision as of 06:06, 14 September 2013
Short description: | p@chr5:115879504..115879518, - |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr5:115879504..115879518, - |
Coexpression cluster: | MCL_coexpression_mm9:57 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
ectodermal cell | 1.55e-14 | 44 |
neurectodermal cell | 1.55e-14 | 44 |
neural cell | 1.95e-13 | 43 |
CNS neuron (sensu Vertebrata) | 6.57e-11 | 23 |
neuroblast (sensu Vertebrata) | 6.57e-11 | 23 |
neuron | 1.03e-09 | 33 |
neuronal stem cell | 1.03e-09 | 33 |
neuroblast | 1.03e-09 | 33 |
electrically signaling cell | 1.03e-09 | 33 |
embryonic cell | 4.67e-09 | 70 |
neuron of cerebral cortex | 4.07e-08 | 6 |
electrically responsive cell | 1.65e-07 | 39 |
electrically active cell | 1.65e-07 | 39 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.