FFCP PHASE1:Mm9::chr15:25294475..25294500,+: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=22|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr15:25294475..25294500,+|id=chr15:25294475..25294500,+|ontology_enrichment_celltype=CL:0000117!1.24e-16!23;CL:0000337!1.24e-16!23;CL:0000540!3.93e-16!33;CL:0000047!3.93e-16!33;CL:0000031!3.93e-16!33;CL:0000404!3.93e-16!33;CL:0002319!1.48e-15!43;CL:0000393!1.50e-15!39;CL:0000211!1.50e-15!39;CL:0000221!1.56e-15!44;CL:0000133!1.56e-15!44;CL:0000055!1.37e-14!50;CL:0002321!2.84e-07!70;CL:0000220!2.84e-07!70|ontology_enrichment_celltype_v019_2=CL:0000117,5.25e-31,23;CL:0000337,5.25e-31,23;CL:0000540,8.29e-23,33;CL:0000047,8.29e-23,33;CL:0000031,8.29e-23,33;CL:0000404,8.29e-23,33;CL:0002319,3.26e-18,43;CL:0000393,5.24e-18,39;CL:0000211,5.24e-18,39;CL:0000221,1.34e-17,44;CL:0000133,1.34e-17,44;CL:0002321,2.14e-10,70;CL:0002609,2.83e-09,6|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001017!2.04e-26!73;UBERON:0005743!2.04e-26!73;UBERON:0000073!4.38e-26!75;UBERON:0001016!4.38e-26!75;UBERON:0002346!3.30e-23!71;UBERON:0003075!3.30e-23!71;UBERON:0007284!3.30e-23!71;UBERON:0004121!5.57e-23!102;UBERON:0000924!5.57e-23!102;UBERON:0006601!5.57e-23!102;UBERON:0000033!2.95e-21!63;UBERON:0003056!5.47e-21!49;UBERON:0001049!1.84e-20!52;UBERON:0005068!1.84e-20!52;UBERON:0006241!1.84e-20!52;UBERON:0007135!1.84e-20!52;UBERON:0002020!4.02e-20!34;UBERON:0000955!2.71e-19!50;UBERON:0006238!2.71e-19!50;UBERON:0002616!8.69e-19!49;UBERON:0003080!3.73e-18!40;UBERON:0002780!9.96e-18!39;UBERON:0001890!9.96e-18!39;UBERON:0006240!9.96e-18!39;UBERON:0002791!1.35e-16!29;UBERON:0003528!1.35e-16!29;UBERON:0001893!1.35e-16!29;UBERON:0000153!1.30e-11!94;UBERON:0000956!1.45e-11!21;UBERON:0001869!1.45e-11!21;UBERON:0000203!1.45e-11!21;UBERON:0007811!4.39e-11!86;UBERON:0002619!6.47e-09!17|ontology_enrichment_uberon_v019_2=UBERON:0002020,2.10e-34,34;UBERON:0001017,6.95e-33,73;UBERON:0000073,2.49e-32,54;UBERON:0001016,1.28e-31,75;UBERON:0001049,5.07e-28,52;UBERON:0005068,5.07e-28,52;UBERON:0006241,5.07e-28,52;UBERON:0007135,5.07e-28,52;UBERON:0002346,7.29e-28,64;UBERON:0003075,7.29e-28,64;UBERON:0007284,7.29e-28,64;UBERON:0003528,1.30e-27,29;UBERON:0002791,1.30e-27,29;UBERON:0001893,1.30e-27,29;UBERON:0004121,5.63e-27,95;UBERON:0000924,5.63e-27,95;UBERON:0006601,5.63e-27,95;UBERON:0003080,6.69e-26,40;UBERON:0003056,1.48e-25,49;UBERON:0002780,4.30e-25,39;UBERON:0001890,4.30e-25,39;UBERON:0006240,4.30e-25,39;UBERON:0000955,1.41e-23,47;UBERON:0006238,1.41e-23,47;UBERON:0010371,7.69e-23,73;UBERON:0002616,1.11e-22,46;UBERON:0000956,1.08e-19,21;UBERON:0001869,1.08e-19,21;UBERON:0000203,1.08e-19,21;UBERON:0010314,2.07e-16,92;UBERON:0002619,1.34e-14,17;UBERON:0002021,2.05e-11,10;UBERON:0000411,2.05e-11,10;UBERON:0001950,2.05e-11,10;UBERON:0002420,6.18e-09,8;UBERON:0007245,6.18e-09,8;UBERON:0010009,6.18e-09,8;UBERON:0010011,6.18e-09,8;UBERON:0000454,6.18e-09,8;UBERON:0001948,6.41e-08,5;UBERON:0002315,6.41e-08,5;UBERON:0000025,1.90e-07,114|phase1_expression=0.160148847104794,0,0,0,0,0,0,0,0,0,0,0.0797721589953364,0,0,0,0,0,0,0.137114433605739,0,0.340173160604279,0,0,0.159992422793407,0.22940928106717,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.683045484958446,0,0.251793635951155,0.202753862439029,0.550640256485045,0.782391344348039,0.436050312760893,0.219686182734472,0.388859798148567,0.699932108126813,0,0,0,0,0.771778308107841,0.286533439938757,0.515672092277442,5.05791152148994,4.23192783417626,3.80298842103708,0.677689064138264,2.66788438833342,0.899899717281399,0.988866362566974,1.4209602298922,1.49800055259202,1.15265491596466,3.7328260431052,6.88530285491622,4.20649922702764,4.57041575046086,2.65042249141936,3.42974237801871,2.49198224647415,7.35375029288017,5.50579404996943,2.17068474744819,1.99688493233117,5.80299666012853,3.38504281328916,6.77187381723788,2.79182999001381,2.25105044012672,4.12555268997387,3.83017161115768,4.12877874317399,4.84638559145781,0.227178579999552,0.302286240427142,0,0,0,0,0,0,0,0,0.259786004602869,1.06001872353102,0.422530259330042,0,0,0,1.94841936910093,1.01343946190039,1.51657333504435,0,0,0,0.346970653532272,0.608930956624282,0.461230994512117,1.05505848386836,0.117588707135705,0,0,0,0,0.161766849947409,0,0,0,0,0,0,0.239630249011841,0,0,1.3481157546434,0.915001205637253,6.91098936620754,3.30266208365325,2.30143911597297,1.87009240103604,1.78465389374533,1.12023300235348,0.124406970610093,0.252722758433675,0.631325567659422,1.30120442962704,0.459804208866946,0.900310649026746,1.35634336052144,1.76894897793452,0.896796041993948,2.62364828767241,0.517406741478031,0.862271971731369,0.756424320671277,0.879755620819744,0.876782929710299,0.278047249225598,1.0447564995665,0,1.39323986772945,0,0,0,0,0.938104239924385,0.180062061461015,0,0.196764231747404,0,0,0,0,0,0,0,0,0.219550115291051,0,1.68231958851302,2.26390147234426,0,0,0.639864751605702,1.16118335930219,0.257734922644187,0.605050573870028,0.667134131534611,0,0,0.164698954724011,0,0,0,0,0,0,0.569003702859245,0.3427455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| ||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=22 | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr15:25294475..25294500,+ | |||
|id=chr15:25294475..25294500,+ | |||
|ontology_enrichment_celltype=CL:0000117!1.24e-16!23;CL:0000337!1.24e-16!23;CL:0000540!3.93e-16!33;CL:0000047!3.93e-16!33;CL:0000031!3.93e-16!33;CL:0000404!3.93e-16!33;CL:0002319!1.48e-15!43;CL:0000393!1.50e-15!39;CL:0000211!1.50e-15!39;CL:0000221!1.56e-15!44;CL:0000133!1.56e-15!44;CL:0000055!1.37e-14!50;CL:0002321!2.84e-07!70;CL:0000220!2.84e-07!70 | |||
|ontology_enrichment_celltype_v019_2=CL:0000117,5.25e-31,23;CL:0000337,5.25e-31,23;CL:0000540,8.29e-23,33;CL:0000047,8.29e-23,33;CL:0000031,8.29e-23,33;CL:0000404,8.29e-23,33;CL:0002319,3.26e-18,43;CL:0000393,5.24e-18,39;CL:0000211,5.24e-18,39;CL:0000221,1.34e-17,44;CL:0000133,1.34e-17,44;CL:0002321,2.14e-10,70;CL:0002609,2.83e-09,6 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!2.04e-26!73;UBERON:0005743!2.04e-26!73;UBERON:0000073!4.38e-26!75;UBERON:0001016!4.38e-26!75;UBERON:0002346!3.30e-23!71;UBERON:0003075!3.30e-23!71;UBERON:0007284!3.30e-23!71;UBERON:0004121!5.57e-23!102;UBERON:0000924!5.57e-23!102;UBERON:0006601!5.57e-23!102;UBERON:0000033!2.95e-21!63;UBERON:0003056!5.47e-21!49;UBERON:0001049!1.84e-20!52;UBERON:0005068!1.84e-20!52;UBERON:0006241!1.84e-20!52;UBERON:0007135!1.84e-20!52;UBERON:0002020!4.02e-20!34;UBERON:0000955!2.71e-19!50;UBERON:0006238!2.71e-19!50;UBERON:0002616!8.69e-19!49;UBERON:0003080!3.73e-18!40;UBERON:0002780!9.96e-18!39;UBERON:0001890!9.96e-18!39;UBERON:0006240!9.96e-18!39;UBERON:0002791!1.35e-16!29;UBERON:0003528!1.35e-16!29;UBERON:0001893!1.35e-16!29;UBERON:0000153!1.30e-11!94;UBERON:0000956!1.45e-11!21;UBERON:0001869!1.45e-11!21;UBERON:0000203!1.45e-11!21;UBERON:0007811!4.39e-11!86;UBERON:0002619!6.47e-09!17 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002020,2.10e-34,34;UBERON:0001017,6.95e-33,73;UBERON:0000073,2.49e-32,54;UBERON:0001016,1.28e-31,75;UBERON:0001049,5.07e-28,52;UBERON:0005068,5.07e-28,52;UBERON:0006241,5.07e-28,52;UBERON:0007135,5.07e-28,52;UBERON:0002346,7.29e-28,64;UBERON:0003075,7.29e-28,64;UBERON:0007284,7.29e-28,64;UBERON:0003528,1.30e-27,29;UBERON:0002791,1.30e-27,29;UBERON:0001893,1.30e-27,29;UBERON:0004121,5.63e-27,95;UBERON:0000924,5.63e-27,95;UBERON:0006601,5.63e-27,95;UBERON:0003080,6.69e-26,40;UBERON:0003056,1.48e-25,49;UBERON:0002780,4.30e-25,39;UBERON:0001890,4.30e-25,39;UBERON:0006240,4.30e-25,39;UBERON:0000955,1.41e-23,47;UBERON:0006238,1.41e-23,47;UBERON:0010371,7.69e-23,73;UBERON:0002616,1.11e-22,46;UBERON:0000956,1.08e-19,21;UBERON:0001869,1.08e-19,21;UBERON:0000203,1.08e-19,21;UBERON:0010314,2.07e-16,92;UBERON:0002619,1.34e-14,17;UBERON:0002021,2.05e-11,10;UBERON:0000411,2.05e-11,10;UBERON:0001950,2.05e-11,10;UBERON:0002420,6.18e-09,8;UBERON:0007245,6.18e-09,8;UBERON:0010009,6.18e-09,8;UBERON:0010011,6.18e-09,8;UBERON:0000454,6.18e-09,8;UBERON:0001948,6.41e-08,5;UBERON:0002315,6.41e-08,5;UBERON:0000025,1.90e-07,114 | |||
|phase1_expression=0.160148847104794,0,0,0,0,0,0,0,0,0,0,0.0797721589953364,0,0,0,0,0,0,0.137114433605739,0,0.340173160604279,0,0,0.159992422793407,0.22940928106717,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.683045484958446,0,0.251793635951155,0.202753862439029,0.550640256485045,0.782391344348039,0.436050312760893,0.219686182734472,0.388859798148567,0.699932108126813,0,0,0,0,0.771778308107841,0.286533439938757,0.515672092277442,5.05791152148994,4.23192783417626,3.80298842103708,0.677689064138264,2.66788438833342,0.899899717281399,0.988866362566974,1.4209602298922,1.49800055259202,1.15265491596466,3.7328260431052,6.88530285491622,4.20649922702764,4.57041575046086,2.65042249141936,3.42974237801871,2.49198224647415,7.35375029288017,5.50579404996943,2.17068474744819,1.99688493233117,5.80299666012853,3.38504281328916,6.77187381723788,2.79182999001381,2.25105044012672,4.12555268997387,3.83017161115768,4.12877874317399,4.84638559145781,0.227178579999552,0.302286240427142,0,0,0,0,0,0,0,0,0.259786004602869,1.06001872353102,0.422530259330042,0,0,0,1.94841936910093,1.01343946190039,1.51657333504435,0,0,0,0.346970653532272,0.608930956624282,0.461230994512117,1.05505848386836,0.117588707135705,0,0,0,0,0.161766849947409,0,0,0,0,0,0,0.239630249011841,0,0,1.3481157546434,0.915001205637253,6.91098936620754,3.30266208365325,2.30143911597297,1.87009240103604,1.78465389374533,1.12023300235348,0.124406970610093,0.252722758433675,0.631325567659422,1.30120442962704,0.459804208866946,0.900310649026746,1.35634336052144,1.76894897793452,0.896796041993948,2.62364828767241,0.517406741478031,0.862271971731369,0.756424320671277,0.879755620819744,0.876782929710299,0.278047249225598,1.0447564995665,0,1.39323986772945,0,0,0,0,0.938104239924385,0.180062061461015,0,0.196764231747404,0,0,0,0,0,0,0,0,0.219550115291051,0,1.68231958851302,2.26390147234426,0,0,0.639864751605702,1.16118335930219,0.257734922644187,0.605050573870028,0.667134131534611,0,0,0.164698954724011,0,0,0,0,0,0,0.569003702859245,0.342745537829186,0,0.407302655690628,0.387904974335251,0.561086559122548,0.505892296994058,0,0,0,0,0,0,0,0,0,0,0.287696137450811,0,0,0,0,0.312037673114561,0,0,0,0,0.37898282354097,0.162964976442026,0.339490171550376,0,0.167506257441816,0.476087281772027,0.780534591431195,0.157635144106191,0.44292937929755,0.318909537314974,0,0,0,0,1.08781136763742,0,0,0.481651769963376,1.28932855251423,0.327869890753351,0,0.94652465824877,0.780877488593277,1.72338718186239,0.238968797952552,0.222798674082394,0.283076530788832,1.61924280669958,0.584511715822624,0.395287777946524,1.60660658210904,0,1.06839362200353,0.488660878060728,0,0,0.242780636154981,0.604647113929502,0.377210159511796,1.47650946440386,0,0,1.09060118843252,0.356497378384721,0,0,0,0,0.540183282093931,0.388076051348264,1.71469628025274,0.532020700926821,0.891844088010353,0.658196082408484,1.2178597964584,0.938686832254841,0.63549621259146,0.220528398054962,0,0,0.0603129249281559,0,0.164140899745061,0,0.556275906031529,0,1.857481811669,0.185194527369712,0,0,0,0,0,0,0,0.316335993581135,0.203319467126849,0.540026704109006,0.209088296014469,0,0.539457385539283,0.165306911450672,0,0.129614973291793,0.621339313086926,0,0.598066184175915,0.165458490457098,0.388902376688095,0.258319646955462,0.168956125490778,0,0.39061315453185,1.8874681996628,0.241584120826006,0,0,0.405450430580328,0.205421914329655,0.129920822977795,0.179026695667481,0,0,0,0.100966449948148,0,0.100826185136841,0.38983152295901,0,0.116876902181569,0,0.665957860122194,0.62799699626633,0.671538465456314,0,0.187682475451182,0,0,0,2.25900737046827,2.30162618253588,2.86447756719698,4.81188910562325,2.05524755931193,1.5107877947794,3.37511250115903,1.35096360967266,1.35942722695261,1.55328093525546,2.59468368960442,0,1.70733605754134,0.729320151204882,0.628839487883947,0.183843508450014,0.222246727801615,0.824140228955577,0.320919209591815,0.252697211763798,0.50695859978048,0,0.655490552289177,0.512201219238954,0.689225627467359,0,0.463537303779422,0.578727661391115,0,0.294397840268795,0.342869252385415,1.4198064492747,1.1921809497366,0.436039249896986,0.376437521661322,0.423073039458382,0.548783918618318,0,0.543216455383447,0.561142271657738,0.711810108745045,0.689531376628944,0,0.77468420592983,0.578719832943424,0.749431733813838,0,0.214871054048298,0.382576664137687,0.220591419119515,0 | |||
|short_description=p@chr15:25294475..25294500,+ | |||
}} |
Revision as of 10:16, 13 September 2013
Short description: | p@chr15:25294475..25294500, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr15:25294475..25294500, + |
Coexpression cluster: | MCL_coexpression_mm9:22 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 5.25e-31 | 23 |
neuroblast (sensu Vertebrata) | 5.25e-31 | 23 |
neuron | 8.29e-23 | 33 |
neuronal stem cell | 8.29e-23 | 33 |
neuroblast | 8.29e-23 | 33 |
electrically signaling cell | 8.29e-23 | 33 |
neural cell | 3.26e-18 | 43 |
electrically responsive cell | 5.24e-18 | 39 |
electrically active cell | 5.24e-18 | 39 |
ectodermal cell | 1.34e-17 | 44 |
neurectodermal cell | 1.34e-17 | 44 |
embryonic cell | 2.14e-10 | 70 |
neuron of cerebral cortex | 2.83e-09 | 6 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.