FFCP PHASE1:Hg19::chr1:16342059..16342090,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=NA|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript|HGNC=NA|TSSclassifier=N|UniProt=NA|association_with_transcript=NA|coexpression_cluster_id=C336|description=CAGE_peak_at_chr1:16342059..16342090,+|id=chr1:16342059..16342090,+|ontology_enrichment_celltype=CL:0000136!9.02e-11!15;CL:0002334!7.10e-08!12;CL:0002580!1.16e-07!3;CL:0002615!2.18e-07!3|ontology_enrichment_celltype_v019=CL:0002617;6.58e-15;2!CL:0002580;3.01e-10;3!CL:0002570;8.33e-09;8!CL:0000511;2.64e-08;1!CL:0002625;2.64e-08;1!CL:0002581;2.64e-08;1!CL:0000216;2.64e-08;1|ontology_enrichment_celltype_v019_2=CL:0002617,5.32e-15,2;CL:0000136,7.45e-12,15;CL:0002580,2.49e-10,3;CL:0002570,7.70e-09,8;CL:0000511,2.13e-08,1;CL:0002625,2.13e-08,1;CL:0000216,2.13e-08,1;CL:0002581,2.46e-08,1|ontology_enrichment_development_v019=UBERON:0010226;5.59e-09;1!UBERON:0010227;7.01e-09;1!UBERON:0004140;8.77e-09;1!UBERON:0000358;1.47e-08;1!UBERON:0005062;4.38e-08;4!UBERON:0007284;4.38e-08;4|ontology_enrichment_disease=|ontology_enrichment_disease_v019=DOID:114;3.83e-16;2!DOID:178;6.03e-09;1!DOID:326;6.03e-09;1!DOID:3978;6.03e-09;1!DOID:3394;6.03e-09;1!DOID:5844;6.03e-09;1!DOID:1287;1.65e-08;4!DOID:3369;2.64e-08;1|ontology_enrichment_disease_v019_2=DOID:114,3.83e-16,2;DOID:178,6.03e-09,1;DOID:326,6.03e-09,1;DOID:3978,6.03e-09,1;DOID:3394,6.03e-09,1;DOID:5844,6.03e-09,1;DOID:1287,1.65e-08,4;DOID:3369,1.84e-08,1|ontology_enrichment_uberon=UBERON:0007023!1.03e-09!115;UBERON:0001443!2.09e-09!11;UBERON:0000310!8.37e-08!10|ontology_enrichment_uberon_v019=UBERON:0007100;1.05e-17;25!UBERON:0000310;2.35e-11;10!UBERON:0004151;4.58e-11;3!UBERON:0001723;9.55e-11;3!UBERON:0001033;9.55e-11;3!UBERON:0003978;1.70e-10;3!UBERON:0000946;1.70e-10;3!UBERON:0001443;2.44e-10;11!UBERON:0002084;5.59e-09;1!UBERON:0002082;5.59e-09;1!UBERON:0002079;7.01e-09;1!UBERON:0001389;7.55e-09;1!UBERON:0000026;7.55e-09;1!UBERON:0008784;7.55e-09;1!UBERON:0006058;7.55e-09;1!UBERON:0003663;7.55e-09;1!UBERON:0004256;7.55e-09;1!UBERON:0004708;7.55e-09;1!UBERON:0002101;7.55e-09;1!UBERON:0004709;7.55e-09;1!UBERON:0002529;7.55e-09;1!UBERON:0010538;7.55e-09;1!UBERON:0003661;7.55e-09;1!UBERON:0010890;7.55e-09;1!UBERON:0002471;7.55e-09;1!UBERON:0001383;7.55e-09;1!UBERON:0010758;7.55e-09;1!UBERON:0010707;7.55e-09;1!UBERON:0000978;7.55e-09;1!UBERON:0002103;7.55e-09;1!UBERON:0001665;7.55e-09;1!UBERON:0003823;7.55e-09;1!UBERON:0000154;7.55e-09;1!UBERON:0010709;7.55e-09;1!UBERON:0002146;1.10e-08;1!UBERON:0005623;1.10e-08;1!UBERON:0001013;1.85e-08;14!UBERON:0002135;2.64e-08;1!UBERON:0001136;2.64e-08;1!UBERON:0001343;2.64e-08;1!UBERON:0004910;2.64e-08;1!UBERON:0004813;2.64e-08;1!UBERON:0000948;3.37e-08;22|ontology_enrichment_uberon_v019_2=UBERON:0007100,2.83e-16,27;UBERON:0000310,1.94e-11,10;UBERON:0004151,4.59e-11,3;UBERON:0001723,1.00e-10,3;UBERON:0001033,1.00e-10,3;UBERON:0010056,1.00e-10,3;UBERON:0001443,2.05e-10,11;UBERON:0003978,2.27e-10,3;UBERON:0009751,2.27e-10,3;UBERON:0000946,2.27e-10,3;UBERON:0002523,2.27e-10,3;UBERON:0005983,2.27e-10,3;UBERON:0002165,2.27e-10,3;UBERON:0002062,2.27e-10,3;UBERON:0007280,2.27e-10,3;UBERON:0003103,4.40e-09,68;UBERON:0002084,5.59e-09,1;UBERON:0002082,5.59e-09,1;UBERON:0010226,5.59e-09,1;UBERON:0002079,7.01e-09,1;UBERON:0005418,7.56e-09,1;UBERON:0001389,7.56e-09,1;UBERON:0000026,7.56e-09,1;UBERON:0008784,7.56e-09,1;UBERON:0006058,7.56e-09,1;UBERON:0003663,7.56e-09,1;UBERON:0004256,7.56e-09,1;UBERON:0004708,7.56e-09,1;UBERON:0002101,7.56e-09,1;UBERON:0004709,7.56e-09,1;UBERON:0002529,7.56e-09,1;UBERON:0010538,7.56e-09,1;UBERON:0003661,7.56e-09,1;UBERON:0010890,7.56e-09,1;UBERON:0002471,7.56e-09,1;UBERON:0001383,7.56e-09,1;UBERON:0004357,7.56e-09,1;UBERON:0004347,7.56e-09,1;UBERON:0005420,7.56e-09,1;UBERON:0005732,7.56e-09,1;UBERON:0010758,7.56e-09,1;UBERON:0010707,7.56e-09,1;UBERON:0000978,7.56e-09,1;UBERON:0002103,7.56e-09,1;UBERON:0001665,7.56e-09,1;UBERON:0003823,7.56e-09,1;UBERON:0000154,7.56e-09,1;UBERON:0010709,7.56e-09,1;UBERON:0005733,7.56e-09,1;UBERON:0005730,7.56e-09,1;UBERON:0002146,1.18e-08,1;UBERON:0005623,1.18e-08,1;UBERON:0001013,1.71e-08,14;UBERON:0001136,2.13e-08,1;UBERON:0001343,2.13e-08,1;UBERON:0004910,2.13e-08,1;UBERON:0005154,2.13e-08,1;UBERON:0005295,2.13e-08,1;UBERON:0004813,2.13e-08,1;UBERON:0005297,2.13e-08,1;UBERON:0005294,2.13e-08,1;UBERON:0010141,2.13e-08,1;UBERON:0005891,2.13e-08,1;UBERON:0002135,3.79e-08,1;UBERON:0000948,1.85e-07,24;UBERON:0005498,1.85e-07,24;UBERON:0004140,1.85e-07,24;UBERON:0009881,1.85e-07,24;UBERON:0004141,1.85e-07,24;UBERON:0003084,1.85e-07,24;UBERON:0007005,1.85e-07,24;UBERON:0004139,1.85e-07,24;UBERON:0004291,1.85e-07,24;UBERON:0007023,6.01e-07,114|phase1_expression=1.99846217197612,1.2846031433459,0.281908808191942,3.00219895059391,0.893922188854576,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=N | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C336 | |||
|description=CAGE_peak_at_chr1:16342059..16342090,+ | |||
|id=chr1:16342059..16342090,+ | |||
|ontology_enrichment_celltype=CL:0000136!9.02e-11!15;CL:0002334!7.10e-08!12;CL:0002580!1.16e-07!3;CL:0002615!2.18e-07!3 | |||
|ontology_enrichment_celltype_v019=CL:0002617;6.58e-15;2!CL:0002580;3.01e-10;3!CL:0002570;8.33e-09;8!CL:0000511;2.64e-08;1!CL:0002625;2.64e-08;1!CL:0002581;2.64e-08;1!CL:0000216;2.64e-08;1 | |||
|ontology_enrichment_celltype_v019_2=CL:0002617,5.32e-15,2;CL:0000136,7.45e-12,15;CL:0002580,2.49e-10,3;CL:0002570,7.70e-09,8;CL:0000511,2.13e-08,1;CL:0002625,2.13e-08,1;CL:0000216,2.13e-08,1;CL:0002581,2.46e-08,1 | |||
|ontology_enrichment_development_v019=UBERON:0010226;5.59e-09;1!UBERON:0010227;7.01e-09;1!UBERON:0004140;8.77e-09;1!UBERON:0000358;1.47e-08;1!UBERON:0005062;4.38e-08;4!UBERON:0007284;4.38e-08;4 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:114;3.83e-16;2!DOID:178;6.03e-09;1!DOID:326;6.03e-09;1!DOID:3978;6.03e-09;1!DOID:3394;6.03e-09;1!DOID:5844;6.03e-09;1!DOID:1287;1.65e-08;4!DOID:3369;2.64e-08;1 | |||
|ontology_enrichment_disease_v019_2=DOID:114,3.83e-16,2;DOID:178,6.03e-09,1;DOID:326,6.03e-09,1;DOID:3978,6.03e-09,1;DOID:3394,6.03e-09,1;DOID:5844,6.03e-09,1;DOID:1287,1.65e-08,4;DOID:3369,1.84e-08,1 | |||
|ontology_enrichment_uberon=UBERON:0007023!1.03e-09!115;UBERON:0001443!2.09e-09!11;UBERON:0000310!8.37e-08!10 | |||
|ontology_enrichment_uberon_v019=UBERON:0007100;1.05e-17;25!UBERON:0000310;2.35e-11;10!UBERON:0004151;4.58e-11;3!UBERON:0001723;9.55e-11;3!UBERON:0001033;9.55e-11;3!UBERON:0003978;1.70e-10;3!UBERON:0000946;1.70e-10;3!UBERON:0001443;2.44e-10;11!UBERON:0002084;5.59e-09;1!UBERON:0002082;5.59e-09;1!UBERON:0002079;7.01e-09;1!UBERON:0001389;7.55e-09;1!UBERON:0000026;7.55e-09;1!UBERON:0008784;7.55e-09;1!UBERON:0006058;7.55e-09;1!UBERON:0003663;7.55e-09;1!UBERON:0004256;7.55e-09;1!UBERON:0004708;7.55e-09;1!UBERON:0002101;7.55e-09;1!UBERON:0004709;7.55e-09;1!UBERON:0002529;7.55e-09;1!UBERON:0010538;7.55e-09;1!UBERON:0003661;7.55e-09;1!UBERON:0010890;7.55e-09;1!UBERON:0002471;7.55e-09;1!UBERON:0001383;7.55e-09;1!UBERON:0010758;7.55e-09;1!UBERON:0010707;7.55e-09;1!UBERON:0000978;7.55e-09;1!UBERON:0002103;7.55e-09;1!UBERON:0001665;7.55e-09;1!UBERON:0003823;7.55e-09;1!UBERON:0000154;7.55e-09;1!UBERON:0010709;7.55e-09;1!UBERON:0002146;1.10e-08;1!UBERON:0005623;1.10e-08;1!UBERON:0001013;1.85e-08;14!UBERON:0002135;2.64e-08;1!UBERON:0001136;2.64e-08;1!UBERON:0001343;2.64e-08;1!UBERON:0004910;2.64e-08;1!UBERON:0004813;2.64e-08;1!UBERON:0000948;3.37e-08;22 | |||
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|phase1_expression=1.99846217197612,1.2846031433459,0.281908808191942,3.00219895059391,0.893922188854576,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.0843174571537,0,0.579386075843295,0,0.486634870302636,0,0,0,0.130979075497713,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.98788780678127,0,0,0,0.354668382198357,0,0,0.24666754841716,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.427114777637135,0.211931901159562,0.300091096084402,0.103052529238439,0.257640540045629,0.37223371266318,0.168776332241266,0.194874010322397,0,0.0920498986422993,0,0.355009592516614,0,0,0,0,0,0,0,0,0,0,0,0,1.28648187638577,0,0,0,0,0,0,0.110293972732394,0.217879444092406,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.57656445851882,0,0,0,0,0,0,0,0,0,0,0,0,0.602878754119172,0,0.199945982364114,0,0,0,0,0,0,0,0.205476322550383,0.716243852959582,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.623912584592421,0.178428988797162,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.73675465473144,0.767309866440312,1.40330047216537,0,0,0.64341568457443,1.48418066444991,0,0,0.0821271560138091,0,0.116210378459959,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.27470839445503,0.330037999682352,0,0,1.6068392984416,0,0,0,0,0,0,0,0.0890320356467374,0,0,0,0,0,0.31481234683064,0,0,0,0,0.18532421910392,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.876901770507525,0,0,0,0,0,0,0,0,0,0.633322905892992,0.329294892959902,0,0,0,0,0,0.0941438007767792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.146508179271894,0,0,0,0,0,0,0,0,0,0,0,2.19172787076177,0,0,0,0,0,0,0,0,0.197286811273867,0,0,0,0,0,0,0,0.724999575434793,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0769502585037971,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.995261931078505,0.0884575645033392,0,0,0,0,0,0.802577647298789,0,0,0,0,0.394584402849391,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0969890164884194,0,0.225980740780532,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.11712960508902,3.20824593616357,0,13.5781720339314,10.3014251552777,1.56220020209311,4.03100834920358,0.360299883542404,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0788057072991982,0.0524545881349981,0,0,0,7.14695326373367,23.1732189627901,0,0,0.864221491201268,0.326587360109409,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.544017803369474,0.5013797880454,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.521745061811734,0,0,0,0,0,0,0,0,3.77735275701072,3.36749488765919,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.198916222116275,0.225630985047772,0,0,0,0,0,0,0,0,0,0,0,0.496211178389294,0,0,0,0,0,0,0,0,0,0,0.0657727735628491,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.47428837187895,1.33461648913121,0,0.485710993059139,0,0,0,0,0,0,0.0771741581079447,0,0,1.22574160876953,0,0,0,0,0.679708458751268,0,0,0,0,0,0,0,0,0,0,0.135982980381829,0,0,0,0,0,0,0,0,0,0,0,0,0.0757786982182394,0.267964130156178,0,0,0.852935927603924,0,0,0,0.224263725161227,0.0636471582781649,0,2.17716747896961,5.4757328173645,0,0.143444410785353,0.665320713092027,0,0,0,0,2.34640942403454,0.122241444182866,0,0,0,0 | |||
|short_description=p@chr1:16342059..16342090,+ | |||
}} |
Revision as of 01:29, 12 September 2013
Short description: | p@chr1:16342059..16342090, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr1:16342059..16342090, + |
Coexpression cluster: | C336_left_heart_skeletal_breast_lung_mature_adipose |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
adipocyte of breast | 5.32e-15 | 2 |
fat cell | 7.45e-12 | 15 |
preadipocyte of the breast | 2.49e-10 | 3 |
mesenchymal stem cell of adipose | 7.70e-09 | 8 |
androgen binding protein secreting cell | 2.13e-08 | 1 |
seminiferous tubule epithelial cell | 2.13e-08 | 1 |
Sertoli cell | 2.13e-08 | 1 |
perirenal preadipocyte | 2.46e-08 | 1 |
Ontology term | p-value | n |
---|---|---|
heart disease | 3.83e-16 | 2 |
vascular disease | 6.03e-09 | 1 |
ischemia | 6.03e-09 | 1 |
extrinsic cardiomyopathy | 6.03e-09 | 1 |
myocardial ischemia | 6.03e-09 | 1 |
myocardial infarction | 6.03e-09 | 1 |
cardiovascular system disease | 1.65e-08 | 4 |
peripheral primitive neuroectodermal tumor | 1.84e-08 | 1 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.