FFCP PHASE1:Hg19::chr10:29923855..29923866,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=6840|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=11480|TSSclassifier=S|UniProt=|association_with_transcript=15bp_to_uc001iuv.1_5end|coexpression_cluster_id=C56|description=CAGE_peak_9_at_SVIL_5end|id=chr10:29923855..29923866,-|ontology_enrichment_celltype=CL:0000359!2.50e-08!32;CL:0000680!1.84e-07!57;CL:0000056!1.84e-07!57;CL:0000355!1.84e-07!57|ontology_enrichment_celltype_v019=CL:0000154;7.28e-09;6!CL:0000622;1.48e-07;5|ontology_enrichment_celltype_v019_2=CL:0000154,3.27e-09,6;CL:0000622,6.50e-08,5|ontology_enrichment_development_v019=UBERON:0006603;2.50e-07;65|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000468!4.53e-13!659;UBERON:0000922!1.77e-11!612;UBERON:0002050!9.83e-11!605;UBERON:0005423!9.83e-11!605;UBERON:0000923!1.53e-10!604;UBERON:0005291!1.53e-10!604;UBERON:0006598!1.53e-10!604;UBERON:0002532!1.53e-10!604;UBERON:0002385!1.77e-10!63;UBERON:0001015!1.77e-10!63;UBERON:0000383!1.77e-10!63;UBERON:0000481!3.74e-10!347;UBERON:0000467!3.79e-10!625;UBERON:0000486!4.61e-10!82;UBERON:0000480!5.28e-10!626;UBERON:0001134!1.60e-09!61;UBERON:0002036!1.60e-09!61;UBERON:0003082!1.60e-09!61;UBERON:0000914!2.09e-09!83;UBERON:0002329!2.09e-09!83;UBERON:0003077!2.09e-09!83;UBERON:0003059!2.09e-09!83;UBERON:0007282!2.09e-09!83;UBERON:0009618!2.09e-09!83;UBERON:0007285!2.09e-09!83;UBERON:0004290!2.41e-09!70;UBERON:0007023!1.19e-08!115;UBERON:0000926!3.97e-08!448;UBERON:0004120!3.97e-08!448;UBERON:0006603!3.97e-08!448;UBERON:0003133!1.44e-07!48;UBERON:0005156!1.61e-07!59;UBERON:0000990!1.61e-07!59;UBERON:0003104!4.87e-07!238;UBERON:0009142!4.87e-07!238;UBERON:0000475!7.89e-07!365;UBERON:0003102!9.19e-07!95;UBERON:0004872!9.45e-07!84;UBERON:0007100!9.62e-07!27|ontology_enrichment_uberon_v019=UBERON:0007100;1.10e-09;25!UBERON:0001134;6.97e-08;16!UBERON:0002036;6.97e-08;16!UBERON:0000991;9.67e-08;21!UBERON:0002385;4.18e-07;31!UBERON:0001015;4.18e-07;31!UBERON:0000383;4.18e-07;31!UBERON:0005904;6.96e-07;4|ontology_enrichment_uberon_v019_2=UBERON:0007023,2.45e-11,114;UBERON:0002385,1.94e-09,64;UBERON:0001015,1.94e-09,64;UBERON:0000383,1.94e-09,64;UBERON:0002553,2.23e-09,61;UBERON:0004458,6.65e-09,49;UBERON:0004872,7.75e-09,83;UBERON:0007100,9.38e-09,27;UBERON:0003133,1.98e-08,48;UBERON:0004797,3.79e-08,7;UBERON:0001134,4.32e-08,62;UBERON:0002036,4.32e-08,62;UBERON:0003082,4.32e-08,62;UBERON:0000926,5.30e-08,315;UBERON:0004120,5.30e-08,315;UBERON:0006603,5.30e-08,315;UBERON:0000923,5.87e-08,560;UBERON:0010316,5.87e-08,560;UBERON:0005291,5.87e-08,560;UBERON:0006598,5.87e-08,560;UBERON:0010317,5.87e-08,560;UBERON:0002532,5.87e-08,560;UBERON:0000991,8.77e-08,21;UBERON:0009196,8.77e-08,21;UBERON:0009117,8.77e-08,21;UBERON:0005564,8.77e-08,21;UBERON:0001637,9.52e-08,42;UBERON:0003509,9.52e-08,42;UBERON:0004572,9.52e-08,42;UBERON:0002050,1.05e-07,564;UBERON:0002323,1.11e-07,46;UBERON:0002329,1.31e-07,71;UBERON:0003059,1.31e-07,71;UBERON:0007282,1.31e-07,71;UBERON:0004290,1.31e-07,71;UBERON:0009618,1.31e-07,71;UBERON:0003077,2.07e-07,72;UBERON:0007285,2.07e-07,72;UBERON:0004573,2.34e-07,33;UBERON:0004571,2.34e-07,33;UBERON:0004176,2.68e-07,22;UBERON:0000922,2.89e-07,592;UBERON:0007524,3.22e-07,73;UBERON:0000486,5.86e-07,83;UBERON:0005904,6.50e-07,4|phase1_expression=0.181678379270557,0.642301571672949,0.281908808191942,1.0007329835313,0,3.48935409640147,0,0.631719873426831,0.261185628199839,0.245733936501509,0,0,0,0.247532705920093,0.994192127183747,0.672325146451775,1.20538905604795,1.46062018077475,0,0,0,0,0,0,0,0,0,0.157421562627358,0,0.383829398097213,0.154816123316076,0,0,0,0,0,0,0,0.601633342410425,0,0,0,0,0.145398238779565,0,0,0,0,0,0,0,0,0.344745680736619,0,0,0,0.545812300115692,0,0,0,0,0,0,0,0,0.56738522469114,0.622822248995575,0,0,0,0.605399502633369,0.736555271975129,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.722878304769133,1.00267582127178,0.869079113764942,0,0,0.378139268656271,0,0.175669571386252,3.1434978119451,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.402829317109147,0,0.24406205754817,0,0,0,0,0,0,0,0,0,0,0.436094052142534,0.993943903390637,3.16576279161449,7.54732330635347,1.14734648299525,0.354668382198357,0,1.06748995729705,0.98667019366864,1.24484414159907,0.538842688278752,0.326923806226917,0.605429710579726,1.15235184896,0.468642863667593,0.936480230490962,0,1.04614076386261,0.352303495931295,0.323745888736263,0,1.63323337003915,0,0.516628905878827,0,0,0,0,0.168336113954066,0,0.554128230968366,0,0.30648779579902,0.600952235626387,0.113432183160021,0,0.640672166455702,0.847727604638247,0,0,0.515281080091258,0.18611685633159,0.843881661206331,0.194874010322397,0,0.184099797284599,4.20279747728911,0,0.403008392910561,0.508681776931463,0.773043412653187,0.545492241181669,0.286804595389004,0,0.132529768321485,0.232387885739037,0.10366105501537,0,0,1.56449532329816,0,0,1.393103784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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=6840 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=11480 | |||
|TSSclassifier=S | |||
|UniProt= | |||
|association_with_transcript=15bp_to_uc001iuv.1_5end | |||
|coexpression_cluster_id=C56 | |||
|description=CAGE_peak_9_at_SVIL_5end | |||
|id=chr10:29923855..29923866,- | |||
|ontology_enrichment_celltype=CL:0000359!2.50e-08!32;CL:0000680!1.84e-07!57;CL:0000056!1.84e-07!57;CL:0000355!1.84e-07!57 | |||
|ontology_enrichment_celltype_v019=CL:0000154;7.28e-09;6!CL:0000622;1.48e-07;5 | |||
|ontology_enrichment_celltype_v019_2=CL:0000154,3.27e-09,6;CL:0000622,6.50e-08,5 | |||
|ontology_enrichment_development_v019=UBERON:0006603;2.50e-07;65 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000468!4.53e-13!659;UBERON:0000922!1.77e-11!612;UBERON:0002050!9.83e-11!605;UBERON:0005423!9.83e-11!605;UBERON:0000923!1.53e-10!604;UBERON:0005291!1.53e-10!604;UBERON:0006598!1.53e-10!604;UBERON:0002532!1.53e-10!604;UBERON:0002385!1.77e-10!63;UBERON:0001015!1.77e-10!63;UBERON:0000383!1.77e-10!63;UBERON:0000481!3.74e-10!347;UBERON:0000467!3.79e-10!625;UBERON:0000486!4.61e-10!82;UBERON:0000480!5.28e-10!626;UBERON:0001134!1.60e-09!61;UBERON:0002036!1.60e-09!61;UBERON:0003082!1.60e-09!61;UBERON:0000914!2.09e-09!83;UBERON:0002329!2.09e-09!83;UBERON:0003077!2.09e-09!83;UBERON:0003059!2.09e-09!83;UBERON:0007282!2.09e-09!83;UBERON:0009618!2.09e-09!83;UBERON:0007285!2.09e-09!83;UBERON:0004290!2.41e-09!70;UBERON:0007023!1.19e-08!115;UBERON:0000926!3.97e-08!448;UBERON:0004120!3.97e-08!448;UBERON:0006603!3.97e-08!448;UBERON:0003133!1.44e-07!48;UBERON:0005156!1.61e-07!59;UBERON:0000990!1.61e-07!59;UBERON:0003104!4.87e-07!238;UBERON:0009142!4.87e-07!238;UBERON:0000475!7.89e-07!365;UBERON:0003102!9.19e-07!95;UBERON:0004872!9.45e-07!84;UBERON:0007100!9.62e-07!27 | |||
|ontology_enrichment_uberon_v019=UBERON:0007100;1.10e-09;25!UBERON:0001134;6.97e-08;16!UBERON:0002036;6.97e-08;16!UBERON:0000991;9.67e-08;21!UBERON:0002385;4.18e-07;31!UBERON:0001015;4.18e-07;31!UBERON:0000383;4.18e-07;31!UBERON:0005904;6.96e-07;4 | |||
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| |||
|short_description=p9@SVIL | |||
}} |
Revision as of 13:05, 10 September 2013
Short description: | p9@SVIL |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_9_at_SVIL_5end |
Coexpression cluster: | C56_heart_left_umbilical_skeletal_penis_diaphragm_tongue |
Association with transcript: | 15bp_to_uc001iuv.1_5end |
EntrezGene: | SVIL |
HGNC: | 11480 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
protein secreting cell | 3.27e-09 | 6 |
acinar cell | 6.50e-08 | 5 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.