FFCP PHASE1:Hg19::chr15:74218787..74218813,+: Difference between revisions
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{{FFCP | 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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=4016 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=6665 | |||
|TSSclassifier=S | |||
|UniProt=Q08397 | |||
|association_with_transcript=0bp_to_ENST00000261921,ENST00000395162,NM_005576,uc002awc.1_5end | |||
|coexpression_cluster_id=C589 | |||
|description=CAGE_peak_1_at_LOXL1_5end | |||
|id=chr15:74218787..74218813,+ | |||
|ontology_enrichment_celltype=CL:0000055!4.46e-49!180;CL:0000057!1.25e-22!75;CL:0000183!1.27e-20!59;CL:0000680!1.99e-20!57;CL:0000056!1.99e-20!57;CL:0000355!1.99e-20!57;CL:0000187!2.80e-19!54;CL:0000393!1.60e-17!60;CL:0000211!1.60e-17!60;CL:0000192!2.55e-15!42;CL:0000514!2.55e-15!42;CL:0002321!2.66e-14!248;CL:0000220!2.93e-14!246;CL:0000222!5.88e-14!119;CL:0000359!2.83e-13!32;CL:0000133!3.10e-08!59;CL:0002620!4.26e-08!23;CL:0000144!4.29e-08!625;CL:0000221!5.14e-08!71;CL:0002494!2.61e-07!16;CL:0002371!7.86e-07!591 | |||
|ontology_enrichment_celltype_v019=CL:0000359;8.10e-13;32!CL:0000192;5.79e-12;43!CL:0000187;3.32e-11;55!CL:0000393;1.35e-09;61!CL:0000211;1.35e-09;61!CL:0000057;2.75e-09;73!CL:0002620;3.31e-08;23!CL:0000134;3.83e-08;55!CL:0000723;4.22e-08;61!CL:0000048;6.80e-08;58!CL:0002320;7.09e-08;188!CL:0002494;2.04e-07;16 | |||
|ontology_enrichment_celltype_v019_2=CL:0000057,3.35e-23,76;CL:0000680,2.43e-21,58;CL:0000056,2.43e-21,58;CL:0000355,2.43e-21,58;CL:0000187,3.61e-20,55;CL:0000393,2.34e-18,61;CL:0000211,2.34e-18,61;CL:0000192,3.94e-16,43;CL:0000514,3.94e-16,43;CL:0002321,8.18e-14,250;CL:0000359,1.77e-13,32;CL:0000222,2.15e-13,121;CL:0000221,1.47e-08,72;CL:0000133,2.15e-08,59;CL:0002620,3.28e-08,23;CL:0002494,2.07e-07,16 | |||
|ontology_enrichment_development_v019=CL:0000514;5.79e-12;43!CL:0000355;2.50e-11;58 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
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| |||
|short_description=p1@LOXL1 | |||
}} |
Revision as of 08:11, 11 September 2013
Short description: | p1@LOXL1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_LOXL1_5end |
Coexpression cluster: | C589_Mesenchymal_Smooth_Fibroblast_Osteoblast_tenocyte_Preadipocyte_Synoviocyte |
Association with transcript: | 0bp_to_ENST00000261921, ENST00000395162, NM_005576, uc002awc.1_5end |
EntrezGene: | LOXL1 |
HGNC: | 6665 |
UniProt: | Q08397 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast | 3.35e-23 | 76 |
muscle precursor cell | 2.43e-21 | 58 |
myoblast | 2.43e-21 | 58 |
multi-potent skeletal muscle stem cell | 2.43e-21 | 58 |
muscle cell | 3.61e-20 | 55 |
electrically responsive cell | 2.34e-18 | 61 |
electrically active cell | 2.34e-18 | 61 |
smooth muscle cell | 3.94e-16 | 43 |
smooth muscle myoblast | 3.94e-16 | 43 |
embryonic cell | 8.18e-14 | 250 |
vascular associated smooth muscle cell | 1.77e-13 | 32 |
mesodermal cell | 2.15e-13 | 121 |
ectodermal cell | 1.47e-08 | 72 |
neurectodermal cell | 2.15e-08 | 59 |
skin fibroblast | 3.28e-08 | 23 |
cardiocyte | 2.07e-07 | 16 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.