FFCP PHASE1:Hg19::chr17:36715685..36715749,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=80725|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=29506|TSSclassifier=W|UniProt=Q9C0H9|association_with_transcript=0bp_to_uc002hqg.2_5end|description=CAGE_peak_3_at_SRCIN1_5end|id=chr17:36715685..36715749,-|ontology_enrichment_celltype=CL:0000066!1.60e-17!254;CL:0000223!4.21e-08!59;CL:0000082!6.01e-07!19|ontology_enrichment_celltype_v019=CL:0000082;1.75e-10;19|ontology_enrichment_celltype_v019_2=CL:0000066,4.80e-21,253;CL:0000082,2.33e-10,19;CL:0000223,3.97e-08,58|ontology_enrichment_development_v019=UBERON:0008947;2.03e-13;29!UBERON:0001041;1.66e-10;30|ontology_enrichment_disease=DOID:0050687!3.16e-31!143;DOID:162!7.53e-29!235;DOID:14566!1.86e-27!239;DOID:305!9.61e-27!106;DOID:0050615!1.33e-08!16;DOID:1324!4.91e-08!15;DOID:0050686!5.08e-08!137;DOID:1749!8.15e-08!14|ontology_enrichment_disease_v019=DOID:0050615;3.26e-12;16!DOID:1324;2.52e-11;15!DOID:1749;1.28e-10;14!DOID:0050687;7.82e-10;143!DOID:305;8.40e-10;106!DOID:3905;1.71e-07;9!DOID:3119;1.77e-07;14|ontology_enrichment_disease_v019_2=DOID:0050687,5.77e-41,143;DOID:162,3.36e-36,235;DOID:14566,1.25e-34,239;DOID:305,2.86e-33,106;DOID:0050615,5.59e-12,16;DOID:1324,4.37e-11,15;DOID:0050686,1.00e-10,137;DOID:1749,1.31e-10,14;DOID:3119,1.42e-07,14;DOID:3905,2.83e-07,9|ontology_enrichment_uberon=UBERON:0001041!2.98e-12!98;UBERON:0000077!1.17e-10!130;UBERON:0004119!3.91e-10!169;UBERON:0000925!3.91e-10!169;UBERON:0006595!3.91e-10!169;UBERON:0008947!4.88e-10!38;UBERON:0003258!4.88e-10!38;UBERON:0000065!9.23e-10!53;UBERON:0004921!9.66e-10!129;UBERON:0004185!9.66e-10!129;UBERON:0001004!1.26e-09!72;UBERON:0001007!1.28e-09!155;UBERON:0001555!1.28e-09!155;UBERON:0007026!1.28e-09!155;UBERON:0005177!1.37e-08!107;UBERON:0000072!8.18e-08!46;UBERON:0002048!1.45e-07!22;UBERON:0000117!1.45e-07!22;UBERON:0000171!1.45e-07!22;UBERON:0000170!1.45e-07!22;UBERON:0005597!1.45e-07!22;UBERON:0000118!1.45e-07!22;UBERON:0000466!3.62e-07!126;UBERON:0004802!6.01e-07!19;UBERON:0000115!6.01e-07!19;UBERON:0000464!7.16e-07!104|ontology_enrichment_uberon_v019=UBERON:0002048;6.19e-11;22!UBERON:0000117;6.19e-11;22!UBERON:0000171;6.19e-11;22!UBERON:0000170;6.19e-11;22!UBERON:0004802;1.75e-10;19!UBERON:0000115;1.75e-10;19!UBERON:0000065;3.30e-10;44!UBERON:0000072;4.33e-10;37!UBERON:0004807;1.61e-09;22!UBERON:0005178;1.28e-08;34!UBERON:0002224;1.28e-08;34!UBERON:0005181;9.12e-08;35!UBERON:0001004;1.83e-07;65|ontology_enrichment_uberon_v019_2=UBERON:0008947,4.13e-13,38;UBERON:0003258,4.13e-13,38;UBERON:0001041,5.23e-11,87;UBERON:0002048,1.18e-10,22;UBERON:0000117,1.18e-10,22;UBERON:0000171,1.18e-10,22;UBERON:0000170,1.18e-10,22;UBERON:0005597,1.18e-10,22;UBERON:0000118,1.18e-10,22;UBERON:0004802,2.33e-10,19;UBERON:0000115,2.33e-10,19;UBERON:0001004,2.96e-10,74;UBERON:0000065,3.32e-10,54;UBERON:0005177,3.99e-10,101;UBERON:0005178,2.47e-09,34;UBERON:0002224,2.47e-09,34;UBERON:0005181,7.00e-09,35;UBERON:0004119,9.31e-09,160;UBERON:0000925,9.31e-09,160;UBERON:0006595,9.31e-09,160;UBERON:0004921,1.30e-08,118;UBERON:0000072,1.81e-08,47;UBERON:0005153,2.61e-08,37;UBERON:0001007,4.66e-08,145;UBERON:0001555,4.66e-08,145;UBERON:0007026,4.66e-08,145;UBERON:0005911,3.17e-07,82|phase1_expression=0,0.214100523890983,0.140954404095971,0,0,0,0,0,0.522371256399677,0,0.697801167972428,0.436882744260345,0,0,0,0,0,0,0,0,0,0,0,0,0,1.83392173795083,1.55991119954897,1.25937250101887,0.393364276848904,1.15148819429164,0,0,1.50602959389125,1.47901604066715,2.78881922089086,0.426507697462265,0.880801318004542,0,1.00272223735071,0.217010870715852,0,0,0.257575567634187,0.581592955118259,0,0,0.464858073811369,0.411167888021826,0,0.28769239232215,0,0.236482229888585,0.344745680736619,0.645484683583826,0,0.188242339542605,0.272906150057846,0,0.306083892370903,0.320929027076094,0,0.329851300186716,0.199463657621632,0,0.290209238628584,0.56738522469114,0,0.251248665256743,0.521482918420201,0.217188844705117,0,0.368277635987565,0.316462387440884,0,0,0,0,0.150176892841506,0,0,0,0,0,0,0,0.426730222566507,0.400395987036012,0,0,0,0,0.587237189370939,0.382273228125229,0,0.560508562981536,0.263384084775077,0.786839080455332,1.57204305099666,0.205601498999509,0,0,0.473447805734733,0,0,0.294605907474837,0,0,0,0.130059347559878,0.164437904603676,0,0,0,0,0,0,0,0,0,0,0,0,0.301150238155546,0.255973222308837,0,0.473554504088034,0,0.604820229674197,0.802320587350522,0.579297615531196,2.43806866313962,0,0.12786256184353,0,0,0.289693037921647,0,0,0.0945348171640679,0,0.263504357079378,0.523916301990851,0.728590576585084,0.370784442784429,0,0.870648686496336,0.26591592103773,0,0,0,0,0,0.347140501607594,0,0,0,0,0,0,0,0,0,0,0,0,0.0892997282840798,0,0,0,0,0,0,3.87780264148325,0.436094052142534,0,0,0,0,0,0.560677600142307,0,0,0,0,0,0,0,1.17160715916898,0,0,0,0.117434498643765,0.161872944368132,0,0,0.122834317311768,0,0,0,0,0,0,0.250237039743928,0,0,0,0,0,0,0,0,0,0.103052529238439,0.257640540045629,0,0,0,0,0,0,0,0,0,0.57978255948989,1.36373060295417,0.860413786167011,0.4878948245183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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=80725 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=29506 | |||
|TSSclassifier=W | |||
|UniProt=Q9C0H9 | |||
|association_with_transcript=0bp_to_uc002hqg.2_5end | |||
|description=CAGE_peak_3_at_SRCIN1_5end | |||
|id=chr17:36715685..36715749,- | |||
|ontology_enrichment_celltype=CL:0000066!1.60e-17!254;CL:0000223!4.21e-08!59;CL:0000082!6.01e-07!19 | |||
|ontology_enrichment_celltype_v019=CL:0000082;1.75e-10;19 | |||
|ontology_enrichment_celltype_v019_2=CL:0000066,4.80e-21,253;CL:0000082,2.33e-10,19;CL:0000223,3.97e-08,58 | |||
|ontology_enrichment_development_v019=UBERON:0008947;2.03e-13;29!UBERON:0001041;1.66e-10;30 | |||
|ontology_enrichment_disease=DOID:0050687!3.16e-31!143;DOID:162!7.53e-29!235;DOID:14566!1.86e-27!239;DOID:305!9.61e-27!106;DOID:0050615!1.33e-08!16;DOID:1324!4.91e-08!15;DOID:0050686!5.08e-08!137;DOID:1749!8.15e-08!14 | |||
|ontology_enrichment_disease_v019=DOID:0050615;3.26e-12;16!DOID:1324;2.52e-11;15!DOID:1749;1.28e-10;14!DOID:0050687;7.82e-10;143!DOID:305;8.40e-10;106!DOID:3905;1.71e-07;9!DOID:3119;1.77e-07;14 | |||
|ontology_enrichment_disease_v019_2=DOID:0050687,5.77e-41,143;DOID:162,3.36e-36,235;DOID:14566,1.25e-34,239;DOID:305,2.86e-33,106;DOID:0050615,5.59e-12,16;DOID:1324,4.37e-11,15;DOID:0050686,1.00e-10,137;DOID:1749,1.31e-10,14;DOID:3119,1.42e-07,14;DOID:3905,2.83e-07,9 | |||
|ontology_enrichment_uberon=UBERON:0001041!2.98e-12!98;UBERON:0000077!1.17e-10!130;UBERON:0004119!3.91e-10!169;UBERON:0000925!3.91e-10!169;UBERON:0006595!3.91e-10!169;UBERON:0008947!4.88e-10!38;UBERON:0003258!4.88e-10!38;UBERON:0000065!9.23e-10!53;UBERON:0004921!9.66e-10!129;UBERON:0004185!9.66e-10!129;UBERON:0001004!1.26e-09!72;UBERON:0001007!1.28e-09!155;UBERON:0001555!1.28e-09!155;UBERON:0007026!1.28e-09!155;UBERON:0005177!1.37e-08!107;UBERON:0000072!8.18e-08!46;UBERON:0002048!1.45e-07!22;UBERON:0000117!1.45e-07!22;UBERON:0000171!1.45e-07!22;UBERON:0000170!1.45e-07!22;UBERON:0005597!1.45e-07!22;UBERON:0000118!1.45e-07!22;UBERON:0000466!3.62e-07!126;UBERON:0004802!6.01e-07!19;UBERON:0000115!6.01e-07!19;UBERON:0000464!7.16e-07!104 | |||
|ontology_enrichment_uberon_v019=UBERON:0002048;6.19e-11;22!UBERON:0000117;6.19e-11;22!UBERON:0000171;6.19e-11;22!UBERON:0000170;6.19e-11;22!UBERON:0004802;1.75e-10;19!UBERON:0000115;1.75e-10;19!UBERON:0000065;3.30e-10;44!UBERON:0000072;4.33e-10;37!UBERON:0004807;1.61e-09;22!UBERON:0005178;1.28e-08;34!UBERON:0002224;1.28e-08;34!UBERON:0005181;9.12e-08;35!UBERON:0001004;1.83e-07;65 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0008947,4.13e-13,38;UBERON:0003258,4.13e-13,38;UBERON:0001041,5.23e-11,87;UBERON:0002048,1.18e-10,22;UBERON:0000117,1.18e-10,22;UBERON:0000171,1.18e-10,22;UBERON:0000170,1.18e-10,22;UBERON:0005597,1.18e-10,22;UBERON:0000118,1.18e-10,22;UBERON:0004802,2.33e-10,19;UBERON:0000115,2.33e-10,19;UBERON:0001004,2.96e-10,74;UBERON:0000065,3.32e-10,54;UBERON:0005177,3.99e-10,101;UBERON:0005178,2.47e-09,34;UBERON:0002224,2.47e-09,34;UBERON:0005181,7.00e-09,35;UBERON:0004119,9.31e-09,160;UBERON:0000925,9.31e-09,160;UBERON:0006595,9.31e-09,160;UBERON:0004921,1.30e-08,118;UBERON:0000072,1.81e-08,47;UBERON:0005153,2.61e-08,37;UBERON:0001007,4.66e-08,145;UBERON:0001555,4.66e-08,145;UBERON:0007026,4.66e-08,145;UBERON:0005911,3.17e-07,82 | |||
|phase1_expression=0,0.214100523890983,0.140954404095971,0,0,0,0,0,0.522371256399677,0,0.697801167972428,0.436882744260345,0,0,0,0,0,0,0,0,0,0,0,0,0,1.83392173795083,1.55991119954897,1.25937250101887,0.393364276848904,1.15148819429164,0,0,1.50602959389125,1.47901604066715,2.78881922089086,0.426507697462265,0.880801318004542,0,1.00272223735071,0.217010870715852,0,0,0.257575567634187,0.581592955118259,0,0,0.464858073811369,0.411167888021826,0,0.28769239232215,0,0.236482229888585,0.344745680736619,0.645484683583826,0,0.188242339542605,0.272906150057846,0,0.306083892370903,0.320929027076094,0,0.329851300186716,0.199463657621632,0,0.290209238628584,0.56738522469114,0,0.251248665256743,0.521482918420201,0.217188844705117,0,0.368277635987565,0.316462387440884,0,0,0,0,0.150176892841506,0,0,0,0,0,0,0,0.426730222566507,0.400395987036012,0,0,0,0,0.587237189370939,0.382273228125229,0,0.560508562981536,0.263384084775077,0.786839080455332,1.57204305099666,0.205601498999509,0,0,0.473447805734733,0,0,0.294605907474837,0,0,0,0.130059347559878,0.164437904603676,0,0,0,0,0,0,0,0,0,0,0,0,0.301150238155546,0.255973222308837,0,0.473554504088034,0,0.604820229674197,0.802320587350522,0.579297615531196,2.43806866313962,0,0.12786256184353,0,0,0.289693037921647,0,0,0.0945348171640679,0,0.263504357079378,0.523916301990851,0.728590576585084,0.370784442784429,0,0.870648686496336,0.26591592103773,0,0,0,0,0,0.347140501607594,0,0,0,0,0,0,0,0,0,0,0,0,0.0892997282840798,0,0,0,0,0,0,3.87780264148325,0.436094052142534,0,0,0,0,0,0.560677600142307,0,0,0,0,0,0,0,1.17160715916898,0,0,0,0.117434498643765,0.161872944368132,0,0,0.122834317311768,0,0,0,0,0,0,0.250237039743928,0,0,0,0,0,0,0,0,0,0.103052529238439,0.257640540045629,0,0,0,0,0,0,0,0,0,0.57978255948989,1.36373060295417,0.860413786167011,0.487894824518382,0.132529768321485,0.348581828608555,0.414644220061482,1.26160425437814,0.36497735907583,0,0,1.38134921352481,0,0,2.01121560067735,1.01150814046861,1.20505514941741,1.10293972732394,0.653638332277218,1.42362371466658,0.943819157121151,1.96221465125346,1.53898862778556,0,0,0,0,3.80265104465493,0.982827216677626,1.77236972004421,0,0.491953754172454,0,0.98775256867763,3.37205259772859,0.502644862058154,0.648119116109707,0.325808305310325,0,0,0,0,0,0,0,0,0,0,0.702012795417713,0.297262324577456,0,1.34385702559088,0.992425680696705,1.61205340865127,0.871901815541886,1.91691339582606,0,0,0.207328115540772,0.288239906833923,0.75745460055828,0.126995788584338,0.381988425558278,0,0,0,1.20137223137567,0.285826432630578,0.112131084345361,0,0,0,0,0,0,0,0,0,0,0,0,0.823240336780769,0,0.355391948742546,0.791951872933429,0,0,0.099972991182057,1.2162378064119,0,0,0,0,0,0,0,0,0.784596007954691,1.18218456121156,0.215627574859517,1.15508732651774,0,0,0,0,0,0,0,0,0.12269149171914,0,0,0,0,0,0,0,0,0,0,0,0.0868836144680828,0,0,0.620304078368662,0.215714200818617,0.74709290462411,0.303127571446259,0,0,0,0,0,0.128139149255701,0,0,0,0.154209693802656,0,0,0,0,0,0.802025881213139,2.30202472339741,0,0,0,1.35359883872224,0.924184045252977,0.784349769176855,0,0.211103257785751,0,0,0,1.54227252690289,0.270946437543853,0,0.509752546090077,2.49322802678617,0,0,0,0.512900250232778,0.656029291399411,1.30151357865721,0.9273691048295,0.640986253728404,0.660075999364704,1.14853107599234,1.95018073810956,0,0.096670718292122,0.308097234229289,0.15350367472613,0.137836572484531,0,0,0.255679882248303,0,0.826424576804891,1.15314040419064,3.44554323735377,3.0347334256665,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.78494864019923,0,0,0.117812402345686,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.211107635297664,0,0,0,1.05844323998063,2.01090682660736,2.17781969722645,0.847294206991012,1.72202149068492,0,1.7737206141467,0,0,0,0.569647187174163,0.238231775457789,0.411362273086194,0,0.540031437238115,0,1.06824071127473,0,0.490080431962063,0,0.144269212976445,0,1.11598390910176,0,0,0.211673582723883,0,0.280797178113459,0.684704037099577,0,2.50634477090067,0.338583555603207,0.321176150207399,0.201799707191048,1.27753871307098,5.839590860848,1.84344458585075,0.894704431569664,1.16794399198336,1.75849285861836,0,0,0,0,0,5.61421621224659,0.293016358543788,0,3.34330152832435,1.13654458722565,0.71623345421307,0,0.614321404198464,0,0.703347082052564,0,1.48323486804084,2.32237948940793,1.59398390600856,0.552567831062295,7.80991518348256,0,0.615424027305347,0,1.88723537409386,2.86433879480975,0.511572370226872,5.72131752694215,0,0,0.969332746095218,0.649376687132959,0,0.260427761085233,0,5.79999660347835,3.18621655199399,5.84783395673362,3.78220290828698,5.17115059862197,5.24888304089858,4.16699987839901,0,0.241192877250816,7.62908681585416,10.7261882133288,2.06883333267483,0.219385397153973,1.96089234334182,2.37020365273626,1.00035336054936,0,1.38338342632836,0.0897576444097721,0,0,0.0915975934018623,0.533034776018635,0,0,0,0.225595660617181,0.588187602953219,0.167821586975843,0,0,1.05499032264014,6.8557779426842,0.282706142867882,0.865554558968364,0,0.176915129006678,0,4.15129580152871,2.84197059576957,3.1326584851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| |||
|short_description=p3@SRCIN1 | |||
}} |
Revision as of 13:12, 11 September 2013
Short description: | p3@SRCIN1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_3_at_SRCIN1_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_uc002hqg.2_5end |
EntrezGene: | SRCIN1 |
HGNC: | 29506 |
UniProt: | Q9C0H9 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell | 4.80e-21 | 253 |
epithelial cell of lung | 2.33e-10 | 19 |
endodermal cell | 3.97e-08 | 58 |
Ontology term | p-value | n |
---|---|---|
respiratory primordium | 4.13e-13 | 38 |
endoderm of foregut | 4.13e-13 | 38 |
foregut | 5.23e-11 | 87 |
lung | 1.18e-10 | 22 |
respiratory tube | 1.18e-10 | 22 |
respiration organ | 1.18e-10 | 22 |
pair of lungs | 1.18e-10 | 22 |
lung primordium | 1.18e-10 | 22 |
lung bud | 1.18e-10 | 22 |
respiratory tract epithelium | 2.33e-10 | 19 |
lung epithelium | 2.33e-10 | 19 |
respiratory system | 2.96e-10 | 74 |
respiratory tract | 3.32e-10 | 54 |
trunk region element | 3.99e-10 | 101 |
thoracic cavity element | 2.47e-09 | 34 |
thoracic cavity | 2.47e-09 | 34 |
thoracic segment organ | 7.00e-09 | 35 |
endoderm-derived structure | 9.31e-09 | 160 |
endoderm | 9.31e-09 | 160 |
presumptive endoderm | 9.31e-09 | 160 |
subdivision of digestive tract | 1.30e-08 | 118 |
segment of respiratory tract | 1.81e-08 | 47 |
epithelial bud | 2.61e-08 | 37 |
digestive system | 4.66e-08 | 145 |
digestive tract | 4.66e-08 | 145 |
primitive gut | 4.66e-08 | 145 |
endo-epithelium | 3.17e-07 | 82 |
Ontology term | p-value | n |
---|---|---|
cell type cancer | 5.77e-41 | 143 |
cancer | 3.36e-36 | 235 |
disease of cellular proliferation | 1.25e-34 | 239 |
carcinoma | 2.86e-33 | 106 |
respiratory system cancer | 5.59e-12 | 16 |
lung cancer | 4.37e-11 | 15 |
organ system cancer | 1.00e-10 | 137 |
squamous cell carcinoma | 1.31e-10 | 14 |
gastrointestinal system cancer | 1.42e-07 | 14 |
lung carcinoma | 2.83e-07 | 9 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.