FFCP PHASE1:Hg19::chr17:56065484..56065497,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=7716|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=12949|TSSclassifier=S|UniProt=Q14119|association_with_transcript=117bp_to_ENST00000258963,NM_007146,uc002ivf.1_5end|description=CAGE_peak_3_at_VEZF1_5end|id=chr17:56065484..56065497,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_development_v019=|ontology_enrichment_disease=DOID:0050687!2.47e-07!143|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000073!1.67e-08!94;UBERON:0001016!1.67e-08!94;UBERON:0001017!5.94e-08!82;UBERON:0005743!1.35e-07!86;UBERON:0000924!1.96e-07!173;UBERON:0006601!1.96e-07!173;UBERON:0007023!1.99e-07!115;UBERON:0004121!3.26e-07!169;UBERON:0001049!3.59e-07!57;UBERON:0005068!3.59e-07!57;UBERON:0006241!3.59e-07!57;UBERON:0007135!3.59e-07!57|ontology_enrichment_uberon_v019=|ontology_enrichment_uberon_v019_2=UBERON:0004121,1.88e-11,171;UBERON:0000924,1.88e-11,171;UBERON:0006601,1.88e-11,171;UBERON:0001017,1.03e-10,81;UBERON:0001016,1.29e-10,89;UBERON:0001049,2.11e-09,56;UBERON:0005068,2.11e-09,56;UBERON:0006241,2.11e-09,56;UBERON:0007135,2.11e-09,56;UBERON:0002346,2.37e-09,86;UBERON:0003075,5.60e-09,82;UBERON:0007284,5.60e-09,82;UBERON:0011216,7.02e-09,223;UBERON:0000073,1.42e-08,53;UBERON:0002616,1.42e-08,53;UBERON:0010371,8.29e-08,104;UBERON:0000955,1.18e-07,68;UBERON:0006238,1.18e-07,68;UBERON:0002780,2.92e-07,41;UBERON:0001890,2.92e-07,41;UBERON:0003080,2.92e-07,41;UBERON:0006240,2.92e-07,41;UBERON:0003056,5.81e-07,61;UBERON:0007023,8.26e-07,114|phase1_expression=0.363356758541113,1.2846031433459,1.12763523276777,0,0.893922188854576,0,0,0,0.261185628199839,0.245733936501509,0.697801167972428,0.218441372130172,0.527533956456907,1.23766352960047,1.98838425436749,1.34465029290355,0,0.730310090387373,0.487932798790507,0,0,0.626909442956176,1.43117993565528,2.05311637609326,0.627713197974014,0.534893840235659,0.410502947249729,0.944529375764151,0.393364276848904,0.383829398097213,0.928896739896456,0,0.6024118375565,0,0.232401601740905,0.284338464974843,0.587200878669695,0,1.40381113229099,0.434021741431704,0.223915474239924,0,0,2.76256653681173,3.02300754951048,0.727752183563449,0.464858073811369,1.6446715520873,1.23882548358041,0.28769239232215,1.2808035326455,0.236482229888585,0.689491361473237,0.645484683583826,0,2.07066573496865,1.36453075028923,0.449446968890169,1.22433556948361,0.641858054152187,0.639337125799041,0.329851300186716,1.59570926097305,1.70489900213078,0.870627715885752,0.56738522469114,0.622822248995575,0.75374599577023,1.5644487552606,0.434377689410233,0.605399502633369,0.368277635987565,0.949387162322653,1.05627643155971,0.425208599930087,0.209658645508376,0.673971786878971,0.150176892841506,0.48217676009124,0.285012743741249,0.59675003159727,0.182664153764634,0,0,0,0,0,0,0,0,0.569212969109448,0.587237189370939,1.52909291250092,0,1.68152568894461,0.263384084775077,0.393419540227666,0.393010762749165,0.616804496998528,0,1.30368906653436,0,1.94826728407911,0.445641827540694,0.294605907474837,0.664601683750863,0.541607727530031,0.512365278902701,0.390178042679635,0.328875809207352,1.10540007114339,1.15921234294021,0.14828656316206,0,0,0.339928028092699,1.14966148080576,0,0.253019692019503,0.318565414324097,0.651083453856419,1.90090408889675,0,0.383959833463255,0,0.947109008176067,0.821127996921047,1.00803371612366,2.94184215361858,0.868946423296794,0,0.670700859703636,0.255725123687061,1.80719576192283,0,1.15877215168659,0,0,0.567208902984407,0.443458794925128,0.87834785693126,0.589405839739707,0.364295288292542,0.370784442784429,0.324547393654683,0.174129737299267,0.26591592103773,0.715471872916026,1.14398982156026,0.371457501329565,0.198762407366705,0,0.347140501607594,0,0,0.275118041940067,0.626984899610432,0.775250277507987,0.35576626268671,0.33472061276467,0,0,0.488124115096339,0.735326160691737,0,0.446498641420399,0.673588117878509,0.225222960966644,0,0,0.732806975721629,0,0,0,0.993943903390637,0.506522046658319,0.529636723252875,0.573673241497627,0.709336764396714,0,0,0,0.622422070799533,0.942974704487816,0.490385709340376,0,0,0.234321431833797,0.312160076830321,0,0.597794722207204,1.996386476944,0.971237666208789,1.12360645361799,1.02077085627447,1.47401180774122,1.44656093646072,0,1.97813543422845,0,0,0.336672227908132,1.7516592782075,1.93944880838928,2.19488810440419,0.919463387397059,1.65261864797256,0.340296549480063,0.717558542755448,0.640672166455702,0.211931901159562,0,0.824420233907511,0.772921620136887,0.558350568994769,0.843881661206331,0.389748020644795,0.504867548488229,0.368199594569197,0.484938170456436,0.355009592516614,0.302256294682921,0.508681776931463,0.57978255948989,0,0.573609190778008,0.853815942907168,1.06023814657188,1.2781333715647,0.829288440122964,0.756962552626885,1.09493207722749,0,2.57296375277154,0,1.85747171212792,2.88751792667834,1.0647612003586,0.842923450390509,0.482022059766964,0.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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=7716 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=12949 | |||
|TSSclassifier=S | |||
|UniProt=Q14119 | |||
|association_with_transcript=117bp_to_ENST00000258963,NM_007146,uc002ivf.1_5end | |||
|description=CAGE_peak_3_at_VEZF1_5end | |||
|id=chr17:56065484..56065497,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:0050687!2.47e-07!143 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000073!1.67e-08!94;UBERON:0001016!1.67e-08!94;UBERON:0001017!5.94e-08!82;UBERON:0005743!1.35e-07!86;UBERON:0000924!1.96e-07!173;UBERON:0006601!1.96e-07!173;UBERON:0007023!1.99e-07!115;UBERON:0004121!3.26e-07!169;UBERON:0001049!3.59e-07!57;UBERON:0005068!3.59e-07!57;UBERON:0006241!3.59e-07!57;UBERON:0007135!3.59e-07!57 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004121,1.88e-11,171;UBERON:0000924,1.88e-11,171;UBERON:0006601,1.88e-11,171;UBERON:0001017,1.03e-10,81;UBERON:0001016,1.29e-10,89;UBERON:0001049,2.11e-09,56;UBERON:0005068,2.11e-09,56;UBERON:0006241,2.11e-09,56;UBERON:0007135,2.11e-09,56;UBERON:0002346,2.37e-09,86;UBERON:0003075,5.60e-09,82;UBERON:0007284,5.60e-09,82;UBERON:0011216,7.02e-09,223;UBERON:0000073,1.42e-08,53;UBERON:0002616,1.42e-08,53;UBERON:0010371,8.29e-08,104;UBERON:0000955,1.18e-07,68;UBERON:0006238,1.18e-07,68;UBERON:0002780,2.92e-07,41;UBERON:0001890,2.92e-07,41;UBERON:0003080,2.92e-07,41;UBERON:0006240,2.92e-07,41;UBERON:0003056,5.81e-07,61;UBERON:0007023,8.26e-07,114 | |||
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| |||
|short_description=p3@VEZF1 | |||
}} |
Revision as of 14:45, 11 September 2013
Short description: | p3@VEZF1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_3_at_VEZF1_5end |
Coexpression cluster: | NA |
Association with transcript: | 117bp_to_ENST00000258963, NM_007146, uc002ivf.1_5end |
EntrezGene: | VEZF1 |
HGNC: | 12949 |
UniProt: | Q14119 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
ectoderm-derived structure | 1.88e-11 | 171 |
ectoderm | 1.88e-11 | 171 |
presumptive ectoderm | 1.88e-11 | 171 |
central nervous system | 1.03e-10 | 81 |
nervous system | 1.29e-10 | 89 |
neural tube | 2.11e-09 | 56 |
neural rod | 2.11e-09 | 56 |
future spinal cord | 2.11e-09 | 56 |
neural keel | 2.11e-09 | 56 |
neurectoderm | 2.37e-09 | 86 |
neural plate | 5.60e-09 | 82 |
presumptive neural plate | 5.60e-09 | 82 |
organ system subdivision | 7.02e-09 | 223 |
regional part of nervous system | 1.42e-08 | 53 |
regional part of brain | 1.42e-08 | 53 |
ecto-epithelium | 8.29e-08 | 104 |
brain | 1.18e-07 | 68 |
future brain | 1.18e-07 | 68 |
regional part of forebrain | 2.92e-07 | 41 |
forebrain | 2.92e-07 | 41 |
anterior neural tube | 2.92e-07 | 41 |
future forebrain | 2.92e-07 | 41 |
pre-chordal neural plate | 5.81e-07 | 61 |
adult organism | 8.26e-07 | 114 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.