FFCP PHASE1:Hg19::chr19:1248314..1248335,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=90007|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=16298|TSSclassifier=W|UniProt=Q504T8|association_with_transcript=-216bp_to_ENST00000300952,NM_177401,uc002lrp.2_5end|coexpression_cluster_id=C1238|description=CAGE_peak_9_at_MIDN_5end|id=chr19:1248314..1248335,+|ontology_enrichment_celltype=CL:0000738!2.35e-43!140;CL:0000037!1.79e-36!172;CL:0000566!1.79e-36!172;CL:0002031!2.42e-35!124;CL:0000988!5.34e-34!182;CL:0002087!9.09e-34!119;CL:0002032!3.20e-33!165;CL:0000837!3.20e-33!165;CL:0002057!8.87e-32!42;CL:0000766!3.63e-30!76;CL:0000860!3.69e-29!45;CL:0000557!3.48e-25!71;CL:0000839!2.35e-22!70;CL:0002009!2.12e-21!65;CL:0000763!6.80e-21!112;CL:0000049!6.80e-21!112;CL:0002194!1.74e-20!63;CL:0000576!1.74e-20!63;CL:0000040!1.74e-20!63;CL:0000559!1.74e-20!63;CL:0000791!3.14e-12!18;CL:0000789!3.14e-12!18;CL:0002420!3.14e-12!18;CL:0002419!3.14e-12!18;CL:0000790!3.14e-12!18;CL:0000838!7.55e-12!52;CL:0000542!2.33e-11!53;CL:0000051!2.33e-11!53;CL:0000084!4.10e-10!25;CL:0000827!4.10e-10!25;CL:0000094!1.30e-08!8;CL:0000625!7.02e-08!11;CL:0002393!1.19e-07!9;CL:0002397!1.19e-07!9|ontology_enrichment_celltype_v019=CL:0000860;1.08e-46;33!CL:0002057;1.08e-46;33!CL:0000576;7.78e-34;48!CL:0000473;8.81e-34;39!CL:0000234;8.81e-34;39!CL:0000766;1.92e-29;69!CL:0002087;9.22e-21;104!CL:0000094;3.11e-16;8!CL:0000738;4.75e-16;136!CL:0000791;1.46e-13;18!CL:0000789;1.46e-13;18!CL:0002419;1.46e-13;18!CL:0000763;3.65e-13;100!CL:0000084;5.42e-12;25!CL:0000988;2.01e-11;177!CL:0000081;2.97e-11;11!CL:0002393;1.73e-10;6!CL:0002397;1.73e-10;6!CL:0000542;4.41e-09;53!CL:0000624;2.39e-07;6!CL:0000775;3.78e-07;3!CL:0000767;4.90e-07;3!CL:0000219;5.72e-07;193!CL:0000625;6.68e-07;11!CL:0000623;9.59e-07;3|ontology_enrichment_celltype_v019_2=CL:0000738,3.67e-77,136;CL:0000860,8.20e-65,42;CL:0002057,8.20e-65,42;CL:0000037,5.63e-63,168;CL:0000766,9.02e-62,72;CL:0002087,5.31e-61,115;CL:0002031,1.44e-59,120;CL:0000988,1.64e-58,177;CL:0000473,1.73e-57,48;CL:0000234,1.73e-57,48;CL:0002032,3.99e-56,161;CL:0000837,3.99e-56,161;CL:0000557,3.00e-47,67;CL:0000839,3.97e-46,66;CL:0002194,3.80e-43,59;CL:0000576,3.80e-43,59;CL:0000040,3.80e-43,59;CL:0000559,3.80e-43,59;CL:0002009,2.66e-41,61;CL:0000763,1.18e-38,108;CL:0000049,1.18e-38,108;CL:0000134,5.79e-20,354;CL:0002320,4.20e-19,361;CL:0000094,3.05e-16,8;CL:0000219,4.33e-16,386;CL:0000838,2.08e-15,52;CL:0000542,5.63e-15,53;CL:0000051,5.63e-15,53;CL:0000034,6.25e-15,441;CL:0002393,3.02e-14,9;CL:0002397,3.02e-14,9;CL:0000048,3.95e-14,427;CL:0000723,1.34e-13,433;CL:0000791,1.49e-13,18;CL:0000789,1.49e-13,18;CL:0002420,1.49e-13,18;CL:0002419,1.49e-13,18;CL:0000790,1.49e-13,18;CL:0000084,6.32e-12,25;CL:0000827,6.32e-12,25;CL:0000081,2.93e-11,11;CL:0000624,1.92e-07,6;CL:0000775,3.72e-07,3;CL:0000767,4.87e-07,3;CL:0000625,7.29e-07,11;CL:0000623,9.80e-07,3;CL:0000825,9.80e-07,3|ontology_enrichment_development_v019=CL:0002057;4.38e-46;42!CL:0000790;1.46e-13;18!CL:0000049;1.42e-11;108!CL:0000051;4.41e-09;53|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002193!7.36e-31!112;UBERON:0002390!8.03e-31!102;UBERON:0003061!8.03e-31!102;UBERON:0002371!1.47e-24!80;UBERON:0001474!4.98e-21!86;UBERON:0002405!4.64e-19!115;UBERON:0004765!7.77e-15!101;UBERON:0001434!7.77e-15!101;UBERON:0003081!2.97e-12!216|ontology_enrichment_uberon_v019=|ontology_enrichment_uberon_v019_2=UBERON:0002390,6.02e-48,98;UBERON:0003061,6.02e-48,98;UBERON:0002193,4.35e-45,108;UBERON:0002371,4.09e-44,76;UBERON:0002405,2.34e-41,93;UBERON:0001474,9.03e-40,82;UBERON:0004765,6.93e-35,90;UBERON:0001434,6.83e-30,100;UBERON:0003081,6.18e-19,203;UBERON:0002384,1.22e-18,371;UBERON:0002204,6.10e-13,167;UBERON:0000926,7.58e-07,315;UBERON:0004120,7.58e-07,315;UBERON:0006603,7.58e-07,315|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0764134057479513,0.0821005894499457,0.236132343941038,22.8151280572364,14.5855171276941,20.5905444010381,0.919421224478927,0,0,0,0,4.40400659002271,12.7418943962332,12.6343001906189,8.02940221648652,0.447830948479849,0.647787332037959,0,4.50734540216651,4.91238726795452,4.85168122375632,6.50801303335917,11.5127008646111,11.7688420940139,5.75384784644301,6.40401766322752,7.09446689665756,5.17118521104928,14.2006630388442,12.1883837934908,9.22387463758763,6.27684145133045,4.49446968890169,7.95818120164347,6.09765151444578,5.11469700639233,2.63881040149373,3.98927315243264,2.55734850319616,6.38460324982885,5.6738522469114,7.4738669879469,10.80369260604,8.34372669472322,13.2485195270121,2.42159801053347,2.94622108790052,2.53169909952708,2.5350634357433,3.18906449947565,1.25795187305026,1.57260083605093,2.55300717830561,1.44653028027372,2.28010194992999,2.78483348078726,1.46131323011707,1.75996244461323,1.09227722252426,0.889509253863555,1.28019066769952,0,1.14950487990897,0,0,7.96898156753228,14.6809297342735,11.8504700718821,56.8336712889811,49.3247535423752,1.31692042387539,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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=90007 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=16298 | |||
|TSSclassifier=W | |||
|UniProt=Q504T8 | |||
|association_with_transcript=-216bp_to_ENST00000300952,NM_177401,uc002lrp.2_5end | |||
|coexpression_cluster_id=C1238 | |||
|description=CAGE_peak_9_at_MIDN_5end | |||
|id=chr19:1248314..1248335,+ | |||
|ontology_enrichment_celltype=CL:0000738!2.35e-43!140;CL:0000037!1.79e-36!172;CL:0000566!1.79e-36!172;CL:0002031!2.42e-35!124;CL:0000988!5.34e-34!182;CL:0002087!9.09e-34!119;CL:0002032!3.20e-33!165;CL:0000837!3.20e-33!165;CL:0002057!8.87e-32!42;CL:0000766!3.63e-30!76;CL:0000860!3.69e-29!45;CL:0000557!3.48e-25!71;CL:0000839!2.35e-22!70;CL:0002009!2.12e-21!65;CL:0000763!6.80e-21!112;CL:0000049!6.80e-21!112;CL:0002194!1.74e-20!63;CL:0000576!1.74e-20!63;CL:0000040!1.74e-20!63;CL:0000559!1.74e-20!63;CL:0000791!3.14e-12!18;CL:0000789!3.14e-12!18;CL:0002420!3.14e-12!18;CL:0002419!3.14e-12!18;CL:0000790!3.14e-12!18;CL:0000838!7.55e-12!52;CL:0000542!2.33e-11!53;CL:0000051!2.33e-11!53;CL:0000084!4.10e-10!25;CL:0000827!4.10e-10!25;CL:0000094!1.30e-08!8;CL:0000625!7.02e-08!11;CL:0002393!1.19e-07!9;CL:0002397!1.19e-07!9 | |||
|ontology_enrichment_celltype_v019=CL:0000860;1.08e-46;33!CL:0002057;1.08e-46;33!CL:0000576;7.78e-34;48!CL:0000473;8.81e-34;39!CL:0000234;8.81e-34;39!CL:0000766;1.92e-29;69!CL:0002087;9.22e-21;104!CL:0000094;3.11e-16;8!CL:0000738;4.75e-16;136!CL:0000791;1.46e-13;18!CL:0000789;1.46e-13;18!CL:0002419;1.46e-13;18!CL:0000763;3.65e-13;100!CL:0000084;5.42e-12;25!CL:0000988;2.01e-11;177!CL:0000081;2.97e-11;11!CL:0002393;1.73e-10;6!CL:0002397;1.73e-10;6!CL:0000542;4.41e-09;53!CL:0000624;2.39e-07;6!CL:0000775;3.78e-07;3!CL:0000767;4.90e-07;3!CL:0000219;5.72e-07;193!CL:0000625;6.68e-07;11!CL:0000623;9.59e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000738,3.67e-77,136;CL:0000860,8.20e-65,42;CL:0002057,8.20e-65,42;CL:0000037,5.63e-63,168;CL:0000766,9.02e-62,72;CL:0002087,5.31e-61,115;CL:0002031,1.44e-59,120;CL:0000988,1.64e-58,177;CL:0000473,1.73e-57,48;CL:0000234,1.73e-57,48;CL:0002032,3.99e-56,161;CL:0000837,3.99e-56,161;CL:0000557,3.00e-47,67;CL:0000839,3.97e-46,66;CL:0002194,3.80e-43,59;CL:0000576,3.80e-43,59;CL:0000040,3.80e-43,59;CL:0000559,3.80e-43,59;CL:0002009,2.66e-41,61;CL:0000763,1.18e-38,108;CL:0000049,1.18e-38,108;CL:0000134,5.79e-20,354;CL:0002320,4.20e-19,361;CL:0000094,3.05e-16,8;CL:0000219,4.33e-16,386;CL:0000838,2.08e-15,52;CL:0000542,5.63e-15,53;CL:0000051,5.63e-15,53;CL:0000034,6.25e-15,441;CL:0002393,3.02e-14,9;CL:0002397,3.02e-14,9;CL:0000048,3.95e-14,427;CL:0000723,1.34e-13,433;CL:0000791,1.49e-13,18;CL:0000789,1.49e-13,18;CL:0002420,1.49e-13,18;CL:0002419,1.49e-13,18;CL:0000790,1.49e-13,18;CL:0000084,6.32e-12,25;CL:0000827,6.32e-12,25;CL:0000081,2.93e-11,11;CL:0000624,1.92e-07,6;CL:0000775,3.72e-07,3;CL:0000767,4.87e-07,3;CL:0000625,7.29e-07,11;CL:0000623,9.80e-07,3;CL:0000825,9.80e-07,3 | |||
|ontology_enrichment_development_v019=CL:0002057;4.38e-46;42!CL:0000790;1.46e-13;18!CL:0000049;1.42e-11;108!CL:0000051;4.41e-09;53 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002193!7.36e-31!112;UBERON:0002390!8.03e-31!102;UBERON:0003061!8.03e-31!102;UBERON:0002371!1.47e-24!80;UBERON:0001474!4.98e-21!86;UBERON:0002405!4.64e-19!115;UBERON:0004765!7.77e-15!101;UBERON:0001434!7.77e-15!101;UBERON:0003081!2.97e-12!216 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,6.02e-48,98;UBERON:0003061,6.02e-48,98;UBERON:0002193,4.35e-45,108;UBERON:0002371,4.09e-44,76;UBERON:0002405,2.34e-41,93;UBERON:0001474,9.03e-40,82;UBERON:0004765,6.93e-35,90;UBERON:0001434,6.83e-30,100;UBERON:0003081,6.18e-19,203;UBERON:0002384,1.22e-18,371;UBERON:0002204,6.10e-13,167;UBERON:0000926,7.58e-07,315;UBERON:0004120,7.58e-07,315;UBERON:0006603,7.58e-07,315 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0764134057479513,0.0821005894499457,0.236132343941038,22.8151280572364,14.5855171276941,20.5905444010381,0.919421224478927,0,0,0,0,4.40400659002271,12.7418943962332,12.6343001906189,8.02940221648652,0.447830948479849,0.647787332037959,0,4.50734540216651,4.91238726795452,4.85168122375632,6.50801303335917,11.5127008646111,11.7688420940139,5.75384784644301,6.40401766322752,7.09446689665756,5.17118521104928,14.2006630388442,12.1883837934908,9.22387463758763,6.27684145133045,4.49446968890169,7.95818120164347,6.09765151444578,5.11469700639233,2.63881040149373,3.98927315243264,2.55734850319616,6.38460324982885,5.6738522469114,7.4738669879469,10.80369260604,8.34372669472322,13.2485195270121,2.42159801053347,2.94622108790052,2.53169909952708,2.5350634357433,3.18906449947565,1.25795187305026,1.57260083605093,2.55300717830561,1.44653028027372,2.28010194992999,2.78483348078726,1.46131323011707,1.75996244461323,1.09227722252426,0.889509253863555,1.28019066769952,0,1.14950487990897,0,0,7.96898156753228,14.6809297342735,11.8504700718821,56.8336712889811,49.3247535423752,1.31692042387539,4.13090517239049,10.2182798314783,16.0369169219617,0.167186495390678,0.32592226663359,0,0,1.33692548262208,2.94605907474837,1.10766947291811,1.35401931882508,2.17755243533648,2.21100890851793,0.493313713811028,0.829050053357545,0,0.14828656316206,0,0,1.35971211237079,1.53288197440768,4.12352934579156,2.53019692019503,0.637130828648193,1.30216690771284,0.950452044448374,0.451725357233318,1.02389288923535,2.49861453104692,0.947109008176067,1.64225599384209,17.5397866605517,21.6626558584641,12.4548987339207,0,0,0,0,0,0,0,0,0,0,0.175669571386252,0.196468613246569,0,0,0,0,0,0.953962497221368,1.14398982156026,1.11437250398869,1.59009925893364,3.4409383804245,0.694281003215189,1.69592382577203,0.838998872419812,0.550236083880135,1.46296476575767,0.258416759169329,0.71153252537342,0,0.402829317109147,0,0.488124115096339,0,0,0.267899184852239,0,0.112611480483322,0,0,0.732806975721629,54.0299711487859,31.022421131866,0,0,0,0,0,0.709336764396714,0,0,0,0,0.134710672069688,0.163461903113459,0,0,0,0,0.570471821544449,0,0.117434498643765,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.168776332241266,0,0,0,0,0,0,0,0.193260853163297,0,0.286804595389004,0.609868530647977,0.265059536642971,0.116193942869518,0.10366105501537,0,0,0,0,0,0.464367928031979,0,0,0,0,0,0,0.237270619111097,0,0,0,0,0,0,0,0,0,0,0,0.122988438543114,0.171567810298526,0,0,0,0,0,0,0,0,0,0.144366447761074,0.925971025153221,0,0,0,0,0,0.594524649154913,0,0,0,0,0,0,0.985326475791887,1.14462964217194,22.5987645939442,10.3766366460212,9.72066737383126,0,0,0,0,0,0,0,0.112131084345361,0,0.07333828582095,0,0,0,0.531876233169741,1.04007436911366,0,0,0.266422179016099,0,0,0,0,0,0,0,0,0,0,1.00451418286425,0,0,0,0,0,0,0.179060963239896,2.01753259188349,11.8218456121156,15.3095578150257,10.1390998661001,0.254094624222463,1.30139853857622,0.773288812777695,0.502548796003046,0,33.7053160776232,17.9496875522415,48.0721995585801,0,0,0.271265023699736,0,0,0,0,0,0,0,0,0,0,0.195801157462741,0,2.48121631347465,8.62856803274467,17.7167745953718,0,0,0,0,0.153461973288062,0,0,0,0,0,0,0,0,0,0,0,0.200506470303285,0.0920809889358963,0,0,0,0.451199612907412,0.0770153371044148,0,0,0,0,0.340187410553031,0,0,0,0,0,0,0,0,0,0,0,0.325378394664303,0.412164046590889,0,0,0,0.650060246036521,0,0,0,0,0.275673144969061,0,0,0.0852266274161009,0,0,0,0,0,0,0,0,0,0,0,0.18532421910392,0,0,0,0,0,0,0,0,0,0,0,0.202182481573316,0,0,0,0,0,0,0,0,0,1.32687795048244,0,0,0,0.202910376962704,0,0,0,0,0.7133421029625,0,0,0,0,0.349934720244983,0,0,0,0.188287601553558,0,0,0,0,1.52234282769651,0.764637207142375,1.13929437434833,0.714695326373367,0.411362273086194,3.24236655596359,0,0.79312517629427,0.106824071127473,0,0.490080431962063,0,0,0,0,0,0.383010740264733,4.65681881992542,0,0,0.456469358066384,0,0,0.169291777801603,0.1605880751037,0,0,0,0,0,0,0,0,0,0,0.33307196799782,0,0,1.75809815126273,0,1.11443384277478,0,0,0.890894042497916,0,0,0,0,6.26254722061686,0,0.19924798825107,0.828851746593443,0,0,0,0,0.269605053441981,0,0,0.197286811273867,7.18449277040819,0,0,0.371072392647405,0,0,0.174919999992391,0,0,0,0,0,0,0,0,0,0,0.110579259931225,0,0.219385397153973,0,0,0.230850775511391,0,0,0,0,0.31900115973192,0,0,0,0.156980256395025,0,0,0.19606253431774,0,0.189753732724185,0.317873157960757,0,0,0,0,0,0.530745387020035,0,0,0,0.208843899010911,0.202203398942031,0,0.234264445725339,0.182454789215666,0,0,0,0,0.30607276163049,0.884612114798832,0,0,0.664653872707185,0,0,0,0,0,0,0.489961987071888,0.174118413160805,0.52418000472609,0,0,0.0730893170861856,0,0.775912131907355,0,0,0.137041924646751,0.397429223405979,0,0,0,0.213452994739353,0.19980960958213,0,0,0,0.432164393964449,0,0,0,0,0,0,0,0.273810757783986,1.27746588066972,0,0,0,0.229160424011684,0,0.199679000498991,0.858452096273142,0.446342914883745,0.201550417460179,0,0,0,0,0.0674035438541849,0.0984274815147488,0,0,0,0,0.4126183097917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| |||
|short_description=p9@MIDN | |||
}} |
Revision as of 18:45, 11 September 2013
Short description: | p9@MIDN |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_9_at_MIDN_5end |
Coexpression cluster: | C1238_CD34_CD14_Eosinophils_CD8_Natural_CD19_Peripheral |
Association with transcript: | -216bp_to_ENST00000300952, NM_177401, uc002lrp.2_5end |
EntrezGene: | MIDN |
HGNC: | 16298 |
UniProt: | Q504T8 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 6.02e-48 | 98 |
blood island | 6.02e-48 | 98 |
hemolymphoid system | 4.35e-45 | 108 |
bone marrow | 4.09e-44 | 76 |
immune system | 2.34e-41 | 93 |
bone element | 9.03e-40 | 82 |
skeletal element | 6.93e-35 | 90 |
skeletal system | 6.83e-30 | 100 |
lateral plate mesoderm | 6.18e-19 | 203 |
connective tissue | 1.22e-18 | 371 |
musculoskeletal system | 6.10e-13 | 167 |
mesoderm | 7.58e-07 | 315 |
mesoderm-derived structure | 7.58e-07 | 315 |
presumptive mesoderm | 7.58e-07 | 315 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.