FFCP PHASE1:Hg19::chrX:129244430..129244442,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=2000|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=3319|TSSclassifier=S|UniProt=Q99607|association_with_transcript=27bp_to_ENST00000308167_5end|coexpression_cluster_id=C26|description=CAGE_peak_5_at_ELF4_5end|id=chrX:129244430..129244442,-|ontology_enrichment_celltype=CL:0000037!1.27e-55!172;CL:0000566!1.27e-55!172;CL:0000763!1.48e-52!112;CL:0000049!1.48e-52!112;CL:0000988!7.93e-52!182;CL:0002032!1.35e-51!165;CL:0000837!1.35e-51!165;CL:0000738!5.59e-49!140;CL:0000766!2.27e-46!76;CL:0000557!1.22e-41!71;CL:0002009!5.55e-39!65;CL:0002194!1.23e-37!63;CL:0000576!1.23e-37!63;CL:0000040!1.23e-37!63;CL:0000559!1.23e-37!63;CL:0000839!1.80e-37!70;CL:0002087!2.95e-36!119;CL:0002031!9.32e-36!124;CL:0002057!9.02e-35!42;CL:0000860!2.20e-32!45;CL:0000134!4.20e-13!358;CL:0002320!6.17e-12!365;CL:0000451!6.03e-09!10;CL:0000945!1.00e-08!24;CL:0000826!1.00e-08!24;CL:0000219!4.36e-08!390;CL:0000094!4.64e-08!8;CL:0000048!6.07e-08!430;CL:0002393!8.22e-08!9;CL:0002397!8.22e-08!9;CL:0000034!1.14e-07!444;CL:0000723!1.90e-07!436;CL:0000990!3.03e-07!8|ontology_enrichment_celltype_v019=CL:0000860;1.80e-51;33!CL:0002057;1.80e-51;33!CL:0000576;1.81e-48;48!CL:0000473;3.14e-46;39!CL:0000234;3.14e-46;39!CL:0000766;4.77e-36;69!CL:0000763;7.65e-21;100!CL:0000738;2.46e-18;136!CL:0002087;8.07e-17;104!CL:0000094;8.73e-15;8!CL:0000451;4.99e-14;10!CL:0000988;1.89e-11;177!CL:0000990;1.14e-10;8!CL:0002393;1.83e-10;6!CL:0002397;1.83e-10;6!CL:0000081;3.13e-10;11!CL:0000840;1.15e-09;5!CL:0000236;1.15e-09;13!CL:0000219;5.77e-08;193!CL:0000775;8.46e-07;3!CL:0000784;9.46e-07;3|ontology_enrichment_celltype_v019_2=CL:0000766,1.42e-90,72;CL:0002009,3.92e-87,61;CL:0002194,2.43e-84,59;CL:0000576,2.43e-84,59;CL:0000040,2.43e-84,59;CL:0000559,2.43e-84,59;CL:0000557,7.96e-81,67;CL:0000738,2.46e-77,136;CL:0000763,3.39e-76,108;CL:0000049,3.39e-76,108;CL:0000473,7.13e-74,48;CL:0000234,7.13e-74,48;CL:0000839,1.57e-73,66;CL:0000037,2.08e-71,168;CL:0000860,8.27e-70,42;CL:0002057,8.27e-70,42;CL:0000988,1.91e-66,177;CL:0002032,7.43e-64,161;CL:0000837,7.43e-64,161;CL:0002087,9.22e-62,115;CL:0002031,3.60e-56,120;CL:0000134,5.27e-21,354;CL:0002320,4.18e-20,361;CL:0000219,5.87e-17,386;CL:0000034,1.46e-15,441;CL:0000048,7.06e-15,427;CL:0000094,7.60e-15,8;CL:0002393,2.44e-14,9;CL:0002397,2.44e-14,9;CL:0000723,2.54e-14,433;CL:0000451,3.67e-14,10;CL:0000990,8.53e-11,8;CL:0000081,2.84e-10,11;CL:0000840,7.81e-10,5;CL:0001029,7.81e-10,5;CL:0000236,7.90e-09,14;CL:0000775,8.02e-07,3;CL:0000784,9.48e-07,3|ontology_enrichment_development_v019=CL:0002057;5.64e-50;42!CL:0000049;7.29e-21;108|ontology_enrichment_disease=DOID:8692!1.53e-07!31|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002390!2.94e-44!102;UBERON:0003061!2.94e-44!102;UBERON:0002193!1.21e-42!112;UBERON:0002371!8.57e-37!80;UBERON:0001474!1.70e-33!86;UBERON:0004765!8.57e-28!101;UBERON:0001434!8.57e-28!101;UBERON:0002405!2.78e-26!115;UBERON:0003081!5.38e-19!216;UBERON:0002204!9.34e-13!167;UBERON:0002384!4.47e-11!375;UBERON:0000178!1.49e-07!15;UBERON:0000179!1.49e-07!15;UBERON:0000463!1.49e-07!15|ontology_enrichment_uberon_v019=UBERON:0000178;8.37e-14;15!UBERON:0000179;8.37e-14;15!UBERON:0000463;8.37e-14;15!UBERON:0002390;6.14e-09;32|ontology_enrichment_uberon_v019_2=UBERON:0002390,1.12e-82,98;UBERON:0003061,1.12e-82,98;UBERON:0002193,3.32e-75,108;UBERON:0002371,1.62e-71,76;UBERON:0001474,6.64e-65,82;UBERON:0002405,5.81e-61,93;UBERON:0004765,1.86e-57,90;UBERON:0001434,8.02e-50,100;UBERON:0003081,6.03e-37,203;UBERON:0002204,2.14e-25,167;UBERON:0002384,6.97e-19,371;UBERON:0000926,4.31e-17,315;UBERON:0004120,4.31e-17,315;UBERON:0006603,4.31e-17,315;UBERON:0000178,6.57e-14,15;UBERON:0000179,6.57e-14,15;UBERON:0000463,6.57e-14,15|phase1_expression=0.363356758541113,0.214100523890983,0.422863212287913,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.687720651731561,0.492603536699674,0.708397031823113,5.50709987588466,3.83829398097213,11.3015770020735,0,0,0,1.70427841276664,0.426507697462265,2.05520307534393,11.0799081706375,11.4310335057981,11.718587018656,3.58264758783879,2.91504299417082,2.06060454107349,17.3023904147682,17.3822934096852,18.9215567726497,13.4808841405297,17.2690512969167,14.865905802965,18.4123131086176,19.2120529896825,16.0807916324238,15.1688099524112,16.1371170895957,16.251178391321,15.247629502951,20.4679612543384,7.86532195557796,18.6711174346251,13.4790191371959,14.0654167675789,20.7806319117631,26.1297391484338,23.4423612792982,13.3496249769149,13.0498601678962,13.7020894779026,15.3261685806613,14.0800387973454,13.6828972164223,8.47559303686716,4.41933163185078,6.64571013625857,3.16882929467913,4.889898899196,4.40283155567589,3.25753030324836,5.40636814229423,4.17886525412408,3.99017841237748,2.58591680358817,3.28795476776341,3.51992488922645,1.09227722252426,3.55803701545422,1.28019066769952,1.60158394814405,2.29900975981793,0,2.86216126360609,1.1384259382189,1.76171156811282,2.675912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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=2000 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=3319 | |||
|TSSclassifier=S | |||
|UniProt=Q99607 | |||
|association_with_transcript=27bp_to_ENST00000308167_5end | |||
|coexpression_cluster_id=C26 | |||
|description=CAGE_peak_5_at_ELF4_5end | |||
|id=chrX:129244430..129244442,- | |||
|ontology_enrichment_celltype=CL:0000037!1.27e-55!172;CL:0000566!1.27e-55!172;CL:0000763!1.48e-52!112;CL:0000049!1.48e-52!112;CL:0000988!7.93e-52!182;CL:0002032!1.35e-51!165;CL:0000837!1.35e-51!165;CL:0000738!5.59e-49!140;CL:0000766!2.27e-46!76;CL:0000557!1.22e-41!71;CL:0002009!5.55e-39!65;CL:0002194!1.23e-37!63;CL:0000576!1.23e-37!63;CL:0000040!1.23e-37!63;CL:0000559!1.23e-37!63;CL:0000839!1.80e-37!70;CL:0002087!2.95e-36!119;CL:0002031!9.32e-36!124;CL:0002057!9.02e-35!42;CL:0000860!2.20e-32!45;CL:0000134!4.20e-13!358;CL:0002320!6.17e-12!365;CL:0000451!6.03e-09!10;CL:0000945!1.00e-08!24;CL:0000826!1.00e-08!24;CL:0000219!4.36e-08!390;CL:0000094!4.64e-08!8;CL:0000048!6.07e-08!430;CL:0002393!8.22e-08!9;CL:0002397!8.22e-08!9;CL:0000034!1.14e-07!444;CL:0000723!1.90e-07!436;CL:0000990!3.03e-07!8 | |||
|ontology_enrichment_celltype_v019=CL:0000860;1.80e-51;33!CL:0002057;1.80e-51;33!CL:0000576;1.81e-48;48!CL:0000473;3.14e-46;39!CL:0000234;3.14e-46;39!CL:0000766;4.77e-36;69!CL:0000763;7.65e-21;100!CL:0000738;2.46e-18;136!CL:0002087;8.07e-17;104!CL:0000094;8.73e-15;8!CL:0000451;4.99e-14;10!CL:0000988;1.89e-11;177!CL:0000990;1.14e-10;8!CL:0002393;1.83e-10;6!CL:0002397;1.83e-10;6!CL:0000081;3.13e-10;11!CL:0000840;1.15e-09;5!CL:0000236;1.15e-09;13!CL:0000219;5.77e-08;193!CL:0000775;8.46e-07;3!CL:0000784;9.46e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000766,1.42e-90,72;CL:0002009,3.92e-87,61;CL:0002194,2.43e-84,59;CL:0000576,2.43e-84,59;CL:0000040,2.43e-84,59;CL:0000559,2.43e-84,59;CL:0000557,7.96e-81,67;CL:0000738,2.46e-77,136;CL:0000763,3.39e-76,108;CL:0000049,3.39e-76,108;CL:0000473,7.13e-74,48;CL:0000234,7.13e-74,48;CL:0000839,1.57e-73,66;CL:0000037,2.08e-71,168;CL:0000860,8.27e-70,42;CL:0002057,8.27e-70,42;CL:0000988,1.91e-66,177;CL:0002032,7.43e-64,161;CL:0000837,7.43e-64,161;CL:0002087,9.22e-62,115;CL:0002031,3.60e-56,120;CL:0000134,5.27e-21,354;CL:0002320,4.18e-20,361;CL:0000219,5.87e-17,386;CL:0000034,1.46e-15,441;CL:0000048,7.06e-15,427;CL:0000094,7.60e-15,8;CL:0002393,2.44e-14,9;CL:0002397,2.44e-14,9;CL:0000723,2.54e-14,433;CL:0000451,3.67e-14,10;CL:0000990,8.53e-11,8;CL:0000081,2.84e-10,11;CL:0000840,7.81e-10,5;CL:0001029,7.81e-10,5;CL:0000236,7.90e-09,14;CL:0000775,8.02e-07,3;CL:0000784,9.48e-07,3 | |||
|ontology_enrichment_development_v019=CL:0002057;5.64e-50;42!CL:0000049;7.29e-21;108 | |||
|ontology_enrichment_disease=DOID:8692!1.53e-07!31 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!2.94e-44!102;UBERON:0003061!2.94e-44!102;UBERON:0002193!1.21e-42!112;UBERON:0002371!8.57e-37!80;UBERON:0001474!1.70e-33!86;UBERON:0004765!8.57e-28!101;UBERON:0001434!8.57e-28!101;UBERON:0002405!2.78e-26!115;UBERON:0003081!5.38e-19!216;UBERON:0002204!9.34e-13!167;UBERON:0002384!4.47e-11!375;UBERON:0000178!1.49e-07!15;UBERON:0000179!1.49e-07!15;UBERON:0000463!1.49e-07!15 | |||
|ontology_enrichment_uberon_v019=UBERON:0000178;8.37e-14;15!UBERON:0000179;8.37e-14;15!UBERON:0000463;8.37e-14;15!UBERON:0002390;6.14e-09;32 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,1.12e-82,98;UBERON:0003061,1.12e-82,98;UBERON:0002193,3.32e-75,108;UBERON:0002371,1.62e-71,76;UBERON:0001474,6.64e-65,82;UBERON:0002405,5.81e-61,93;UBERON:0004765,1.86e-57,90;UBERON:0001434,8.02e-50,100;UBERON:0003081,6.03e-37,203;UBERON:0002204,2.14e-25,167;UBERON:0002384,6.97e-19,371;UBERON:0000926,4.31e-17,315;UBERON:0004120,4.31e-17,315;UBERON:0006603,4.31e-17,315;UBERON:0000178,6.57e-14,15;UBERON:0000179,6.57e-14,15;UBERON:0000463,6.57e-14,15 | |||
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| |||
|short_description=p5@ELF4 | |||
}} |
Revision as of 10:42, 14 September 2013
Short description: | p5@ELF4 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_5_at_ELF4_5end |
Coexpression cluster: | C26_Eosinophils_Neutrophils_CD14_CD14CD16_Basophils_Monocytederived_Whole |
Association with transcript: | 27bp_to_ENST00000308167_5end |
EntrezGene: | ELF4 |
HGNC: | 3319 |
UniProt: | Q99607 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 1.12e-82 | 98 |
blood island | 1.12e-82 | 98 |
hemolymphoid system | 3.32e-75 | 108 |
bone marrow | 1.62e-71 | 76 |
bone element | 6.64e-65 | 82 |
immune system | 5.81e-61 | 93 |
skeletal element | 1.86e-57 | 90 |
skeletal system | 8.02e-50 | 100 |
lateral plate mesoderm | 6.03e-37 | 203 |
musculoskeletal system | 2.14e-25 | 167 |
connective tissue | 6.97e-19 | 371 |
mesoderm | 4.31e-17 | 315 |
mesoderm-derived structure | 4.31e-17 | 315 |
presumptive mesoderm | 4.31e-17 | 315 |
blood | 6.57e-14 | 15 |
haemolymphatic fluid | 6.57e-14 | 15 |
organism substance | 6.57e-14 | 15 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.