FFCP PHASE1:Hg19::chr11:1221057..1221104,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene= | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC= | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=432bp_to_uc009ycs.1_5end | |||
|coexpression_cluster_id=C254 | |||
|description=CAGE_peak_1_at_uc009ycs.1_5end | |||
|id=chr11:1221057..1221104,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0000322;1.83e-14;3!CL:0000082;2.26e-09;19 | |||
|ontology_enrichment_celltype_v019_2=CL:0000322,2.09e-14,3;CL:0000082,2.36e-09,19 | |||
|ontology_enrichment_development_v019=UBERON:0009847;1.22e-14;3!UBERON:0003353;1.22e-14;3!UBERON:0008947;4.36e-13;29!UBERON:0006595;3.42e-09;86 | |||
|ontology_enrichment_disease=DOID:3111!5.70e-09!1;DOID:3603!5.70e-09!1 | |||
|ontology_enrichment_disease_v019=DOID:3910;5.69e-21;2!DOID:1324;1.34e-11;15!DOID:0050615;6.14e-11;16!DOID:3908;3.22e-09;5!DOID:1325;6.04e-07;7!DOID:3904;6.04e-07;7 | |||
|ontology_enrichment_disease_v019_2=DOID:3910,6.96e-21,2;DOID:1324,1.42e-11,15;DOID:0050615,6.45e-11,16;DOID:3908,3.49e-09,5;DOID:1325,6.39e-07,7;DOID:3904,6.39e-07,7 | |||
|ontology_enrichment_uberon=UBERON:0003127!2.73e-16!2;UBERON:0002372!8.36e-09!1;UBERON:0001961!8.36e-09!1;UBERON:0001744!8.36e-09!1;UBERON:0001735!8.36e-09!1;UBERON:0006834!1.42e-08!1;UBERON:0002902!1.91e-08!1;UBERON:0009899!1.91e-08!1;UBERON:0007190!2.06e-08!1;UBERON:0002581!2.22e-08!1 | |||
|ontology_enrichment_uberon_v019=UBERON:0003127;5.69e-21;2!UBERON:0004903;5.69e-21;2!UBERON:0002173;5.69e-21;2!UBERON:0002186;5.69e-21;2!UBERON:0004821;1.83e-14;3!UBERON:0007499;1.83e-14;3!UBERON:0003215;1.83e-14;3!UBERON:0010368;1.83e-14;3!UBERON:0009911;1.83e-14;3!UBERON:0002299;1.83e-14;3!UBERON:0006524;1.83e-14;3!UBERON:0008874;1.83e-14;3!UBERON:0002169;1.83e-14;3!UBERON:0004894;1.83e-14;3!UBERON:0007196;1.49e-11;15!UBERON:0001558;1.49e-11;15!UBERON:0009856;3.42e-11;4!UBERON:0004802;2.26e-09;19!UBERON:0000115;2.26e-09;19!UBERON:0000945;3.22e-09;5!UBERON:0010039;3.22e-09;5!UBERON:0005178;4.26e-09;34!UBERON:0002224;4.26e-09;34!UBERON:0002048;3.15e-08;22!UBERON:0004807;3.15e-08;22!UBERON:0000117;3.15e-08;22!UBERON:0000171;3.15e-08;22!UBERON:0000170;3.15e-08;22!UBERON:0005181;1.10e-07;35!UBERON:0003126;6.04e-07;7!UBERON:0001005;6.04e-07;7 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003127,5.70e-21,2;UBERON:0004903,6.96e-21,2;UBERON:0002173,6.96e-21,2;UBERON:0002186,6.96e-21,2;UBERON:0004821,2.09e-14,3;UBERON:0003215,2.09e-14,3;UBERON:0010368,2.09e-14,3;UBERON:0009911,2.09e-14,3;UBERON:0002299,2.09e-14,3;UBERON:0006524,2.09e-14,3;UBERON:0008874,2.09e-14,3;UBERON:0002169,2.09e-14,3;UBERON:0004894,2.09e-14,3;UBERON:0007196,1.58e-11,15;UBERON:0001558,1.58e-11,15;UBERON:0005178,2.85e-11,34;UBERON:0002224,2.85e-11,34;UBERON:0005181,5.68e-11,35;UBERON:0005153,1.83e-10,37;UBERON:0008947,3.60e-10,38;UBERON:0003258,3.60e-10,38;UBERON:0004802,2.36e-09,19;UBERON:0000115,2.36e-09,19;UBERON:0004921,6.01e-09,118;UBERON:0005157,2.10e-08,47;UBERON:0000072,2.27e-08,47;UBERON:0002048,3.27e-08,22;UBERON:0000117,3.27e-08,22;UBERON:0000171,3.27e-08,22;UBERON:0000170,3.27e-08,22;UBERON:0005597,3.27e-08,22;UBERON:0000118,3.27e-08,22;UBERON:0001041,6.20e-08,87;UBERON:0000915,1.23e-07,52;UBERON:0001007,2.16e-07,145;UBERON:0001555,2.16e-07,145;UBERON:0007026,2.16e-07,145;UBERON:0000065,2.22e-07,54;UBERON:0003126,6.04e-07,7;UBERON:0001005,6.04e-07,7;UBERON:0004119,9.48e-07,160;UBERON:0000925,9.48e-07,160;UBERON:0006595,9.48e-07,160 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0774672005803016,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.122988438543114,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.858486162094873,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.082509499920588,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.18714054040822,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.27126825146383,0,0,0,0,0,0,0,0,0,0,0,0,0.230850775511391,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.664653872707185,0,0.313932918407225,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.14405479798815,0,0.707082103850386,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.136203406111576,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.52407511158336,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.624902039810533,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.633936370075881,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0691572524642179,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0675375846183947,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0657727735628491,0,17.4633300970549,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.357107877211315,0,0,1.46067277649303,0,0,0,0.135982980381829,0,0,0,0,0,0,0,0,0,0,0,0,0.0757786982182394,0,0,0,0,0,0,0,0,0,0,0,0,0.26940821205835,1.36272190246085,0.332660356546013,0,0,0,0,0,0.122241444182866,0,0,0,0 | |||
|short_description=p1@uc009ycs.1 | |||
}} |
Revision as of 05:58, 11 January 2014
Short description: | p1@uc009ycs.1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_uc009ycs.1_5end |
Coexpression cluster: | C254_prostate_rhabdomyosarcoma_seminal_Fibroblast_transitionalcell_Smooth_Iris |
Association with transcript: | 432bp_to_uc009ycs.1_5end |
EntrezGene: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
pneumocyte | 2.09e-14 | 3 |
epithelial cell of lung | 2.36e-09 | 19 |
Ontology term | p-value | n |
---|---|---|
lung adenocarcinoma | 6.96e-21 | 2 |
lung cancer | 1.42e-11 | 15 |
respiratory system cancer | 6.45e-11 | 16 |
non-small cell lung carcinoma | 3.49e-09 | 5 |
bronchus cancer | 6.39e-07 | 7 |
bronchogenic carcinoma | 6.39e-07 | 7 |