FFCP PHASE1:Hg19::chr12:53574671..53574721,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=51380 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=18966 | |||
|TSSclassifier=strong | |||
|UniProt=Q9Y600 | |||
|association_with_transcript=0bp_to_ENST00000308926,ENST00000444623,NM_001244705,uc001sbz.2,uc009zmu.2_5end | |||
|description=CAGE_peak_2_at_CSAD_5end | |||
|id=chr12:53574671..53574721,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!3.61e-16!57;UBERON:0005068!3.61e-16!57;UBERON:0006241!3.61e-16!57;UBERON:0007135!3.61e-16!57;UBERON:0007023!1.05e-15!115;UBERON:0002616!2.86e-14!59;UBERON:0000073!8.97e-14!94;UBERON:0001016!8.97e-14!94;UBERON:0000955!1.40e-13!69;UBERON:0006238!1.40e-13!69;UBERON:0001017!8.29e-13!82;UBERON:0005743!1.06e-12!86;UBERON:0002346!3.13e-12!90;UBERON:0003080!2.69e-11!42;UBERON:0002780!3.18e-11!41;UBERON:0001890!3.18e-11!41;UBERON:0006240!3.18e-11!41;UBERON:0003075!7.43e-11!86;UBERON:0007284!7.43e-11!86;UBERON:0002020!2.41e-09!34;UBERON:0003528!2.41e-09!34;UBERON:0002791!5.02e-09!33;UBERON:0001893!6.33e-09!34;UBERON:0001869!4.77e-08!32;UBERON:0003056!3.18e-07!61 | |||
|ontology_enrichment_uberon_v019=UBERON:0000073;6.99e-09;53!UBERON:0002616;6.99e-09;53!UBERON:0002780;2.07e-08;41!UBERON:0001890;2.07e-08;41!UBERON:0003528;1.87e-07;34!UBERON:0002020;1.87e-07;34!UBERON:0002791;1.98e-07;32!UBERON:0001893;4.17e-07;34!UBERON:0001869;6.36e-07;32!UBERON:0001016;8.41e-07;83 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001049,1.95e-16,56;UBERON:0005068,1.95e-16,56;UBERON:0006241,1.95e-16,56;UBERON:0007135,1.95e-16,56;UBERON:0007023,1.18e-15,114;UBERON:0000073,6.47e-15,53;UBERON:0002616,6.47e-15,53;UBERON:0001016,5.93e-14,89;UBERON:0002346,8.46e-14,86;UBERON:0000955,2.08e-13,68;UBERON:0006238,2.08e-13,68;UBERON:0001017,7.21e-13,81;UBERON:0003075,2.56e-12,82;UBERON:0007284,2.56e-12,82;UBERON:0002780,1.90e-11,41;UBERON:0001890,1.90e-11,41;UBERON:0003080,1.90e-11,41;UBERON:0006240,1.90e-11,41;UBERON:0003528,1.59e-09,34;UBERON:0002020,1.59e-09,34;UBERON:0001893,4.27e-09,34;UBERON:0002791,8.41e-09,32;UBERON:0010371,8.64e-09,104;UBERON:0001869,3.37e-08,32;UBERON:0003056,6.98e-08,61;UBERON:0011216,9.62e-08,223;UBERON:0004121,5.91e-07,171;UBERON:0000924,5.91e-07,171;UBERON:0006601,5.91e-07,171;UBERON:0002619,8.14e-07,22 | |||
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| |||
|short_description=p2@CSAD | |||
}} |
Revision as of 13:42, 11 January 2014
Short description: | p2@CSAD |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_CSAD_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000308926, ENST00000444623, NM_001244705, uc001sbz.2, uc009zmu.2_5end |
EntrezGene: | CSAD |
HGNC: | 18966 |
UniProt: | Q9Y600 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neural tube | 1.95e-16 | 56 |
neural rod | 1.95e-16 | 56 |
future spinal cord | 1.95e-16 | 56 |
neural keel | 1.95e-16 | 56 |
adult organism | 1.18e-15 | 114 |
regional part of nervous system | 6.47e-15 | 53 |
regional part of brain | 6.47e-15 | 53 |
nervous system | 5.93e-14 | 89 |
neurectoderm | 8.46e-14 | 86 |
brain | 2.08e-13 | 68 |
future brain | 2.08e-13 | 68 |
central nervous system | 7.21e-13 | 81 |
neural plate | 2.56e-12 | 82 |
presumptive neural plate | 2.56e-12 | 82 |
regional part of forebrain | 1.90e-11 | 41 |
forebrain | 1.90e-11 | 41 |
anterior neural tube | 1.90e-11 | 41 |
future forebrain | 1.90e-11 | 41 |
brain grey matter | 1.59e-09 | 34 |
gray matter | 1.59e-09 | 34 |
telencephalon | 4.27e-09 | 34 |
regional part of telencephalon | 8.41e-09 | 32 |
ecto-epithelium | 8.64e-09 | 104 |
cerebral hemisphere | 3.37e-08 | 32 |
pre-chordal neural plate | 6.98e-08 | 61 |
organ system subdivision | 9.62e-08 | 223 |
ectoderm-derived structure | 5.91e-07 | 171 |
ectoderm | 5.91e-07 | 171 |
presumptive ectoderm | 5.91e-07 | 171 |
regional part of cerebral cortex | 8.14e-07 | 22 |