FFCP PHASE1:Hg19::chr14:95623682..95623775,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=23405 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=17098 | |||
|TSSclassifier=strong | |||
|UniProt=Q9UPY3 | |||
|association_with_transcript=0bp_to_ENST00000343455,NM_177438,uc001ydx.2,uc001ydz.1,uc001yea.1,uc001yeb.1_5end | |||
|description=CAGE_peak_1_at_DICER1_5end | |||
|id=chr14:95623682..95623775,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0006601;6.99e-08;82!UBERON:0003104;6.37e-07;31 | |||
|ontology_enrichment_disease=DOID:305!1.12e-10!106;DOID:0050687!9.15e-10!143;DOID:1749!3.34e-07!14 | |||
|ontology_enrichment_disease_v019=DOID:1749;3.10e-07;14 | |||
|ontology_enrichment_disease_v019_2=DOID:305,1.12e-10,106;DOID:0050687,9.15e-10,143;DOID:1749,3.34e-07,14 | |||
|ontology_enrichment_uberon=UBERON:0007023!2.25e-27!115;UBERON:0001049!8.43e-16!57;UBERON:0005068!8.43e-16!57;UBERON:0006241!8.43e-16!57;UBERON:0007135!8.43e-16!57;UBERON:0001017!1.82e-14!82;UBERON:0000073!3.98e-14!94;UBERON:0001016!3.98e-14!94;UBERON:0002780!1.08e-13!41;UBERON:0001890!1.08e-13!41;UBERON:0006240!1.08e-13!41;UBERON:0005743!2.11e-13!86;UBERON:0003080!2.19e-13!42;UBERON:0002616!2.20e-13!59;UBERON:0000955!3.56e-13!69;UBERON:0006238!3.56e-13!69;UBERON:0002020!2.76e-10!34;UBERON:0003528!2.76e-10!34;UBERON:0001893!4.40e-10!34;UBERON:0002791!8.39e-10!33;UBERON:0003075!5.12e-09!86;UBERON:0007284!5.12e-09!86;UBERON:0001869!5.48e-09!32;UBERON:0002346!1.66e-08!90;UBERON:0004121!3.22e-08!169;UBERON:0000153!5.34e-08!129;UBERON:0007811!5.34e-08!129;UBERON:0000924!6.07e-08!173;UBERON:0006601!6.07e-08!173;UBERON:0002619!1.80e-07!22;UBERON:0000033!4.61e-07!123;UBERON:0003056!7.27e-07!61;UBERON:0001950!7.68e-07!20 | |||
|ontology_enrichment_uberon_v019=UBERON:0002780;2.88e-10;41!UBERON:0001890;2.88e-10;41!UBERON:0000073;1.90e-09;53!UBERON:0002616;1.90e-09;53!UBERON:0003528;8.52e-09;34!UBERON:0002020;8.52e-09;34!UBERON:0001893;1.07e-08;34!UBERON:0002791;2.16e-08;32!UBERON:0001869;3.68e-08;32!UBERON:0007023;4.40e-08;114!UBERON:0002619;1.79e-07;22!UBERON:0001016;3.09e-07;83!UBERON:0001950;7.44e-07;20 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,6.75e-27,114;UBERON:0001049,4.53e-16,56;UBERON:0005068,4.53e-16,56;UBERON:0006241,4.53e-16,56;UBERON:0007135,4.53e-16,56;UBERON:0001016,2.58e-15,89;UBERON:0000073,6.56e-15,53;UBERON:0002616,6.56e-15,53;UBERON:0011216,7.36e-15,223;UBERON:0001017,1.23e-14,81;UBERON:0002780,1.08e-13,41;UBERON:0001890,1.08e-13,41;UBERON:0003080,1.08e-13,41;UBERON:0006240,1.08e-13,41;UBERON:0000955,2.34e-13,68;UBERON:0006238,2.34e-13,68;UBERON:0003528,2.76e-10,34;UBERON:0002020,2.76e-10,34;UBERON:0001893,4.40e-10,34;UBERON:0002791,2.88e-09,32;UBERON:0003075,4.21e-09,82;UBERON:0007284,4.21e-09,82;UBERON:0001869,5.48e-09,32;UBERON:0002346,1.44e-08,86;UBERON:0004121,1.79e-07,171;UBERON:0000924,1.79e-07,171;UBERON:0006601,1.79e-07,171;UBERON:0002619,1.80e-07,22;UBERON:0010371,1.91e-07,104;UBERON:0003056,2.20e-07,61;UBERON:0001950,7.68e-07,20 | |||
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| |||
|short_description=p1@DICER1 | |||
}} |
Revision as of 21:45, 11 January 2014
Short description: | p1@DICER1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_DICER1_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000343455, NM_177438, uc001ydx.2, uc001ydz.1, uc001yea.1, uc001yeb.1_5end |
EntrezGene: | DICER1 |
HGNC: | 17098 |
UniProt: | Q9UPY3 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
adult organism | 6.75e-27 | 114 |
neural tube | 4.53e-16 | 56 |
neural rod | 4.53e-16 | 56 |
future spinal cord | 4.53e-16 | 56 |
neural keel | 4.53e-16 | 56 |
nervous system | 2.58e-15 | 89 |
regional part of nervous system | 6.56e-15 | 53 |
regional part of brain | 6.56e-15 | 53 |
organ system subdivision | 7.36e-15 | 223 |
central nervous system | 1.23e-14 | 81 |
regional part of forebrain | 1.08e-13 | 41 |
forebrain | 1.08e-13 | 41 |
anterior neural tube | 1.08e-13 | 41 |
future forebrain | 1.08e-13 | 41 |
brain | 2.34e-13 | 68 |
future brain | 2.34e-13 | 68 |
brain grey matter | 2.76e-10 | 34 |
gray matter | 2.76e-10 | 34 |
telencephalon | 4.40e-10 | 34 |
regional part of telencephalon | 2.88e-09 | 32 |
neural plate | 4.21e-09 | 82 |
presumptive neural plate | 4.21e-09 | 82 |
cerebral hemisphere | 5.48e-09 | 32 |
neurectoderm | 1.44e-08 | 86 |
ectoderm-derived structure | 1.79e-07 | 171 |
ectoderm | 1.79e-07 | 171 |
presumptive ectoderm | 1.79e-07 | 171 |
regional part of cerebral cortex | 1.80e-07 | 22 |
ecto-epithelium | 1.91e-07 | 104 |
pre-chordal neural plate | 2.20e-07 | 61 |
neocortex | 7.68e-07 | 20 |
Ontology term | p-value | n |
---|---|---|
carcinoma | 1.12e-10 | 106 |
cell type cancer | 9.15e-10 | 143 |
squamous cell carcinoma | 3.34e-07 | 14 |