FFCP PHASE1:Hg19::chr15:40697988..40698033,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=3712 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=6186 | |||
|TSSclassifier=strong | |||
|UniProt=B3KVI7,P26440 | |||
|association_with_transcript=0bp_to_ENST00000479013,ENST00000487418,ENST00000490194_5end | |||
|description=CAGE_peak_1_at_IVD_5end | |||
|id=chr15:40697988..40698033,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!5.06e-14!57;UBERON:0005068!5.06e-14!57;UBERON:0006241!5.06e-14!57;UBERON:0007135!5.06e-14!57;UBERON:0002616!9.16e-13!59;UBERON:0003075!1.86e-12!86;UBERON:0007284!1.86e-12!86;UBERON:0002346!3.59e-12!90;UBERON:0000475!6.24e-12!365;UBERON:0000025!1.04e-11!194;UBERON:0005743!2.29e-11!86;UBERON:0007023!2.32e-11!115;UBERON:0000073!1.46e-10!94;UBERON:0001016!1.46e-10!94;UBERON:0001017!1.74e-10!82;UBERON:0002780!2.79e-10!41;UBERON:0001890!2.79e-10!41;UBERON:0006240!2.79e-10!41;UBERON:0000955!3.41e-10!69;UBERON:0006238!3.41e-10!69;UBERON:0003080!6.87e-10!42;UBERON:0004111!1.39e-09!241;UBERON:0003056!2.69e-09!61;UBERON:0000483!1.52e-08!309;UBERON:0000481!1.74e-08!347;UBERON:0000119!2.25e-08!312;UBERON:0002020!1.11e-07!34;UBERON:0003528!1.11e-07!34;UBERON:0001893!1.37e-07!34;UBERON:0000477!1.53e-07!286;UBERON:0002791!1.71e-07!33;UBERON:0000033!6.06e-07!123;UBERON:0001869!6.18e-07!32 | |||
|ontology_enrichment_uberon_v019=UBERON:0000073;4.30e-08;53!UBERON:0002616;4.30e-08;53!UBERON:0002780;8.23e-08;41!UBERON:0001890;8.23e-08;41!UBERON:0003528;6.81e-07;34!UBERON:0002020;6.81e-07;34!UBERON:0001893;8.10e-07;34 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001049,1.94e-14,56;UBERON:0005068,1.94e-14,56;UBERON:0006241,1.94e-14,56;UBERON:0007135,1.94e-14,56;UBERON:0003075,3.36e-14,82;UBERON:0007284,3.36e-14,82;UBERON:0002346,7.78e-14,86;UBERON:0000073,1.05e-13,53;UBERON:0002616,1.05e-13,53;UBERON:0010314,1.51e-12,132;UBERON:0000025,1.02e-11,192;UBERON:0007023,2.33e-11,114;UBERON:0001017,9.83e-11,81;UBERON:0010371,1.30e-10,104;UBERON:0000955,1.81e-10,68;UBERON:0006238,1.81e-10,68;UBERON:0002780,2.79e-10,41;UBERON:0001890,2.79e-10,41;UBERON:0003080,2.79e-10,41;UBERON:0006240,2.79e-10,41;UBERON:0003056,4.72e-10,61;UBERON:0001016,6.22e-10,89;UBERON:0004111,1.53e-09,240;UBERON:0000483,1.81e-09,306;UBERON:0000119,2.77e-09,309;UBERON:0003528,1.11e-07,34;UBERON:0002020,1.11e-07,34;UBERON:0001893,1.37e-07,34;UBERON:0002791,4.71e-07,32;UBERON:0001869,6.18e-07,32 | |||
|phase1_expression=37.9707812675463,53.9533320205278,38.1986435100082,44.0322512753774,33.0751209876193,44.4892647291188,48.126976851979,40.4300718993172,85.668886049547,37.5972922847309,76.0603273089946,25.3391991671,30.0694355180437,38.7388684764946,51.035195862099,27.5653310045228,30.1347264011988,32.1336439770444,24.8845727383159,54.542628728017,68.7482329493133,65.8254915103984,38.0693862884305,41.0623275218653,43.1866680206122,28.5786137497338,27.8320998235316,28.4933028355519,12.9810211360138,16.5046641181801,9.75341576891279,22.0661093874943,27.1085326900425,22.1852406100073,11.6975472876255,16.0651232710786,47.2696707329104,12.1878989877013,11.2304890583279,16.9268479158364,22.3915474239924,23.9681312854045,24.7272544928819,5.08893835728477,4.53451132426571,7.76268995801012,3.48643555358527,2.46700732813095,4.64559556342655,3.45230870786581,7.42866048934392,7.33094912654614,5.5159308917859,5.80936215225443,4.06279459783025,4.70605848856512,5.73102915121476,7.19115150224271,2.44867113896722,6.09765151444578,7.03270838378945,5.60747210317417,5.38551875578406,8.95071976118658,2.61188314765726,2.8369261234557,4.9825779919646,6.28121663141858,8.86520961314342,8.03598725408932,7.87019353423379,8.47038562771399,9.17740923578565,31.2657823741674,28.4889761953158,23.4817682969381,19.5451818194901,20.2738805336034,19.6085215770438,42.7519115611873,45.9497524329898,46.0313667486878,33.4392864476513,32.7683166757279,27.5747868697702,32.4314969150545,32.832470936953,32.7608890774055,31.7301538936734,29.5756663905963,15.3687501659551,15.2681669236444,19.4959346343867,27.7559790015954,17.9362740154092,49.7795920224896,14.9499425286513,16.5064520354649,12.9528944369691,20.5639389330534,25.0960145307865,31.2475551784924,31.1722765452658,23.3961959458865,20.6224135232386,19.7165166179423,21.6643091012012,19.2136979588513,20.289258219341,28.447757496436,45.3214029168791,33.327354859531,25.2087157375503,32.9075218550347,38.6781438078414,25.4946021069524,20.6939066545037,20.6176467289578,16.4462799812677,38.8649805475398,49.4823424930878,53.225314489109,37.0414792931321,41.7236352363404,54.9695196830322,32.6752607820743,31.2028638829998,21.3703147818216,23.2672970331651,28.095934353263,60.9517165784904,42.2541541613291,38.4866311149026,28.5536930383807,41.6110465827788,30.7074620196946,19.8821486762775,28.2248224775529,29.305793320861,36.3636211838605,29.248983635811,50.5579231421171,37.8867099824244,17.4268688108682,44.7875403243463,47.0150290708022,34.9679436164615,71.0702060429919,68.6393892936154,91.7500028284025,25.8391129576717,34.409383804245,40.6154386880885,27.1347812123525,34.3989537692123,29.7127485295273,40.3360285416044,28.4258435086262,28.1055347522501,25.1040459573503,20.9471244896756,34.2122447573331,25.870578100106,33.457340311474,35.6462457067974,21.4319347881791,28.2907009508974,27.3645897574473,42.9286584904473,49.3618142975427,26.1978493820482,3.9534125230819,3.87780264148325,35.3236182235453,29.8183171017191,35.2032822427532,46.2108041038134,60.8093635987485,26.6001286648768,31.3979456079692,41.6321083345849,38.7268051014941,32.6771587169755,25.7297383653104,33.1827663320321,50.0993085504723,41.4846665625599,43.5837863210862,33.4011282208443,46.7786893666448,32.7292610408444,23.8392032246843,30.5939864855769,24.7193419795957,37.3602133396455,28.2518929817066,38.4371905973847,29.7000714320513,38.5736409674549,61.8909726117858,70.4245778979914,25.5870893210181,30.0284447692714,37.6807197058489,39.9469635001563,43.8277547992598,45.071417671979,25.0685124783646,47.3588638218596,41.6436908196207,33.0613765808916,51.3155774304328,36.8928054673611,57.4538404301753,43.3652275252604,30.7172924679105,27.5746724606192,49.2245859776023,35.8994604704967,41.3813905456158,47.2162758047097,28.7143479948775,33.9121184620975,20.2923895821462,20.7287051649034,24.6651952034543,41.3490863779328,36.313156520087,39.9707163471143,31.7202828347034,40.8759778418518,63.8710378382702,40.6768784057521,38.5944562915731,46.9658732598434,51.5448400115497,60.6378764602452,17.2727928058172,24.781949441481,17.5938051814942,18.198505500845,17.2124760833001,22.5407088155542,16.7190822118604,13.9317240238996,15.3898862778556,38.3840836404817,50.4870385692405,49.388881359768,57.3333974403614,221.821310938204,135.630155901512,153.014585830484,52.5341088303434,26.9344680409419,22.1322475285098,25.5718165002098,35.9685610424383,2.91534019993729,28.2394757733515,46.9163959646868,61.3561523314951,34.6395220860656,27.4755059790932,26.1821388145882,26.2746934925154,25.9271887042902,31.3919351187087,48.9926726734751,61.8110036708308,19.4511434809044,35.3346440360249,32.4015933789428,25.3081351764298,25.8692477426244,26.0866178925991,18.9864068130038,23.250715081117,31.8207623707125,24.6331618947972,61.4578069412318,38.7703576061244,47.5595846275973,32.9492751242852,26.1611324483736,28.6491319168708,29.3043618025117,41.0573870454493,27.2492855663807,44.1504295030559,34.2991719156694,29.3783440984845,35.3127655754957,25.7417383231535,25.59579972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| |||
|short_description=p1@IVD | |||
}} |
Revision as of 23:01, 11 January 2014
Short description: | p1@IVD |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_IVD_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000479013, ENST00000487418, ENST00000490194_5end |
EntrezGene: | IVD |
HGNC: | 6186 |
UniProt: | B3KVI7P26440 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neural tube | 1.94e-14 | 56 |
neural rod | 1.94e-14 | 56 |
future spinal cord | 1.94e-14 | 56 |
neural keel | 1.94e-14 | 56 |
neural plate | 3.36e-14 | 82 |
presumptive neural plate | 3.36e-14 | 82 |
neurectoderm | 7.78e-14 | 86 |
regional part of nervous system | 1.05e-13 | 53 |
regional part of brain | 1.05e-13 | 53 |
structure with developmental contribution from neural crest | 1.51e-12 | 132 |
tube | 1.02e-11 | 192 |
adult organism | 2.33e-11 | 114 |
central nervous system | 9.83e-11 | 81 |
ecto-epithelium | 1.30e-10 | 104 |
brain | 1.81e-10 | 68 |
future brain | 1.81e-10 | 68 |
regional part of forebrain | 2.79e-10 | 41 |
forebrain | 2.79e-10 | 41 |
anterior neural tube | 2.79e-10 | 41 |
future forebrain | 2.79e-10 | 41 |
pre-chordal neural plate | 4.72e-10 | 61 |
nervous system | 6.22e-10 | 89 |
anatomical conduit | 1.53e-09 | 240 |
epithelium | 1.81e-09 | 306 |
cell layer | 2.77e-09 | 309 |
brain grey matter | 1.11e-07 | 34 |
gray matter | 1.11e-07 | 34 |
telencephalon | 1.37e-07 | 34 |
regional part of telencephalon | 4.71e-07 | 32 |
cerebral hemisphere | 6.18e-07 | 32 |