FFCP PHASE1:Hg19::chr16:3926397..3926401,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport= | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=weak | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C492 | |||
|description=CAGE_peak_at_chr16:3926397..3926401,- | |||
|id=chr16:3926397..3926401,- | |||
|ontology_enrichment_celltype=CL:0000738!2.54e-22!140;CL:0002057!1.18e-20!42;CL:0002031!1.55e-20!124;CL:0002087!3.63e-20!119;CL:0000766!5.43e-20!76;CL:0000860!1.01e-19!45;CL:0000037!1.42e-19!172;CL:0000566!1.42e-19!172;CL:0002032!2.47e-18!165;CL:0000837!2.47e-18!165;CL:0002009!1.57e-17!65;CL:0000557!1.67e-17!71;CL:0000839!1.90e-17!70;CL:0000988!5.16e-17!182;CL:0002194!1.05e-16!63;CL:0000576!1.05e-16!63;CL:0000040!1.05e-16!63;CL:0000559!1.05e-16!63;CL:0000763!1.08e-14!112;CL:0000049!1.08e-14!112 | |||
|ontology_enrichment_celltype_v019=CL:0000860;3.88e-25;33!CL:0002057;3.88e-25;33!CL:0000473;4.96e-23;39!CL:0000234;4.96e-23;39!CL:0000576;1.30e-20;48!CL:0000766;3.62e-15;69!CL:0002087;1.98e-09;104!CL:0000738;4.91e-08;136!CL:0000763;9.60e-08;100!CL:0002393;1.45e-07;6!CL:0002397;1.45e-07;6!CL:0000624;2.96e-07;6 | |||
|ontology_enrichment_celltype_v019_2=CL:0000473,1.06e-35,48;CL:0000234,1.06e-35,48;CL:0000860,3.08e-35,42;CL:0002057,3.08e-35,42;CL:0000738,1.56e-31,136;CL:0002087,5.12e-31,115;CL:0000766,8.39e-31,72;CL:0002009,1.67e-30,61;CL:0002194,7.81e-30,59;CL:0000576,7.81e-30,59;CL:0000040,7.81e-30,59;CL:0000559,7.81e-30,59;CL:0000037,6.17e-27,168;CL:0000557,1.04e-26,67;CL:0002031,2.91e-26,120;CL:0000839,1.89e-25,66;CL:0000988,1.42e-24,177;CL:0002032,3.14e-24,161;CL:0000837,3.14e-24,161;CL:0000763,1.36e-21,108;CL:0000049,1.36e-21,108;CL:0002393,5.18e-09,9;CL:0002397,5.18e-09,9;CL:0000624,4.00e-07,6 | |||
|ontology_enrichment_development_v019=CL:0002057;1.20e-25;42!CL:0000049;4.98e-08;108 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!2.28e-17!102;UBERON:0003061!2.28e-17!102;UBERON:0002193!1.70e-15!112;UBERON:0002371!3.21e-15!80;UBERON:0001474!7.51e-14!86;UBERON:0002405!3.01e-11!115;UBERON:0001049!5.21e-11!57;UBERON:0005068!5.21e-11!57;UBERON:0006241!5.21e-11!57;UBERON:0007135!5.21e-11!57;UBERON:0007023!6.41e-10!115;UBERON:0004765!9.38e-10!101;UBERON:0001434!9.38e-10!101;UBERON:0002780!1.51e-09!41;UBERON:0001890!1.51e-09!41;UBERON:0006240!1.51e-09!41;UBERON:0003080!6.18e-09!42;UBERON:0001017!2.31e-08!82;UBERON:0000955!2.40e-08!69;UBERON:0006238!2.40e-08!69;UBERON:0002616!3.91e-08!59;UBERON:0002020!5.29e-08!34;UBERON:0003528!5.29e-08!34;UBERON:0002346!5.95e-08!90;UBERON:0002791!1.49e-07!33;UBERON:0005743!1.65e-07!86;UBERON:0000073!2.70e-07!94;UBERON:0001016!2.70e-07!94;UBERON:0001893!2.74e-07!34;UBERON:0003075!6.57e-07!86;UBERON:0007284!6.57e-07!86;UBERON:0001950!8.44e-07!20 | |||
|ontology_enrichment_uberon_v019=UBERON:0002780;5.06e-07;41!UBERON:0001890;5.06e-07;41!UBERON:0001950;9.02e-07;20 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,1.50e-25,98;UBERON:0003061,1.50e-25,98;UBERON:0002371,1.60e-23,76;UBERON:0002193,4.17e-23,108;UBERON:0001474,6.25e-21,82;UBERON:0002405,2.64e-19,93;UBERON:0004765,4.95e-18,90;UBERON:0001434,4.33e-15,100;UBERON:0001049,8.61e-10,56;UBERON:0005068,8.61e-10,56;UBERON:0006241,8.61e-10,56;UBERON:0007135,8.61e-10,56;UBERON:0000073,1.42e-09,53;UBERON:0002616,1.42e-09,53;UBERON:0002780,7.33e-09,41;UBERON:0001890,7.33e-09,41;UBERON:0003080,7.33e-09,41;UBERON:0006240,7.33e-09,41;UBERON:0003528,8.67e-08,34;UBERON:0002020,8.67e-08,34;UBERON:0000955,9.84e-08,68;UBERON:0006238,9.84e-08,68;UBERON:0002791,2.65e-07,32;UBERON:0001950,4.87e-07,20;UBERON:0001017,6.60e-07,81 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0.261185628199839,0,0,0,0,0,0,0,0,0,0,0,0.204000691244253,0.313454721478088,0.286235987131057,0.821246550437305,0.753255837568817,0.840547463227464,0.410502947249729,0.708397031823113,0.786728553697808,0.767658796194425,1.08371286321253,0,0.6024118375565,0,0.309868802321207,0.426507697462265,1.46800219667424,8.30993112797816,9.6261334785668,8.02940221648652,0.671746422719773,0,1.28787783817093,2.03557534291391,1.13362783106643,1.69808842831471,2.55671940596253,1.6446715520873,2.16794459626573,3.74000110018796,1.5369642391746,0.47296445977717,5.86067657252252,2.5819387343353,4.06279459783025,1.31769637679823,1.09162460023138,0.449446968890169,3.36692281607993,0.320929027076094,0.639337125799041,1.64925650093358,1.99463657621632,2.55734850319616,3.19230162491442,0.56738522469114,3.11411124497787,3.01498398308092,2.60741459210101,1.3031330682307,1.21079900526674,0.368277635987565,0.949387162322653,0.845021145247767,1.70083439972035,1.46761051855863,1.68492946719743,1.80212271409808,1.6072558669708,2.85012743741249,1.39241674039363,0.91332076882317,0,0,0.889509253863555,1.28019066769952,0.400395987036012,0,0.661044872784862,0,7.96898156753228,5.28513470433845,4.58727873750275,0,1.12101712596307,0.526768169550154,5.50787356318733,7.07419372948497,2.2616164889946,0.167186495390678,0.651844533267181,1.4203434172042,3.89653456815823,0.557052284425868,1.47302953737419,0.443067789167242,0.812411591295047,1.15282187753108,0.650296737799391,1.64437904603676,1.38175008892924,1.15921234294021,1.63115219478266,0.535081656179426,1.04535523804977,0.339928028092699,1.14966148080576,0.68725489096526,1.01207876807801,0.637130828648193,0,0,0,0,0,0.947109008176067,0.821127996921047,3.02410114837099,4.81392352410313,3.76543450095277,0,0.670700859703636,0,0,0,0.289693037921647,0.795285947051099,0.973269740605272,0.567208902984407,0.443458794925128,0.351339142772504,0.982343066232845,0.364295288292542,0,0.649094787309367,0.348259474598534,0.132957960518865,3.10037811596945,0,0,0.596287222100115,0,0.347140501607594,0,0,0,0.208994966536811,0.516833518338658,0.35576626268671,0,0,0,0.24406205754817,0,0,0.267899184852239,0.22452937262617,0.112611480483322,0,0,0,0,3.87780264148325,0,0,0,0.529636723252875,0.573673241497627,0,0,0,0,0.622422070799533,0.134710672069688,0,0.151357427644931,0,0,0,0,0.298897361103602,0.352303495931295,0.161872944368132,0.140450806702248,0.816616685019573,0.61417158655884,0.206651562351531,0,0.247266929278557,0,0,0.168336113954066,0.250237039743928,0,0,0,0,0,0.538168907066586,0.213557388818567,0.423863802319124,1.20036438433761,0.103052529238439,0,0.37223371266318,0.675105328965065,0.0974370051611986,0.504867548488229,0.368199594569197,0.161646056818812,0,0,0,0,0.272746120590835,0.286804595389004,0.121973706129595,0.265059536642971,0.348581828608555,0.10366105501537,0.252320850875628,0.72995471815166,0,0,0,0,0,0,0,0,0,0,0,0.134831308160164,0,0,0,0,0,0,0,0.982827216677626,0.590789906681404,0.882926198829301,0.368965315629341,0,0,0,0,0.0925884451585296,0,1.03993478527958,0,0.34779121492523,0,0,0,0.190254152234598,0.790204397959275,0,1.72351904261178,0,0.445893486866185,0,0,0,0,0,0,0.492663237895943,0.528290604079356,0.414656231081544,0.864719720501769,0.6312121671319,0.126995788584338,0.381988425558278,0,0,0,0,0,0.112131084345361,0,0.07333828582095,0.258543431515556,0,0,0,0,0,0,0.266422179016099,0,0,0,0,0.710783897485092,0,0,0,0.199945982364114,0,1.00451418286425,2.10833939483032,0,0,0,0,0.410952645100767,0.179060963239896,0.560425719967636,2.36436912242313,5.17506179662842,5.13372145118993,0,1.30139853857622,0,0.335032530668698,0.637938751653163,5.24304916763028,8.97484377612075,2.07207756718018,0,0,0,0.415941723061614,0.535286966391485,0.630809660135739,0.35142424497814,0,0,0,0.664225598535437,0,0.260650843404249,0,0,2.27444828735176,5.82428342210265,2.34800627167578,0,0,0,0.248107807818777,0.306923946576125,0,0.256278298511402,0,0.321707842287215,0,0.154209693802656,0,0.164254312027618,0,0,0.362578348774867,0,0.276242966807689,0,0.182091168006717,0.393373244878272,0.451199612907412,0.0770153371044148,0,0,0,0,0,0,0,0,0,0,0,0,0.219259876645935,0.784306353074702,0,0,0,1.03041011647722,0.54941678891006,0.577566499444116,0,0,0,0.096670718292122,0.308097234229289,0.15350367472613,0,0.429680979473094,0.435050081742686,0.255679882248303,0.0890320356467374,0.330569830721956,0,0.382838137483752,0.10115778085555,0,0.31481234683064,0,0,0,0,0,0.143124886741991,0,0,0,0,0,0,0,0.899362287916574,0.274537029736055,0,0,0,0,0,0.243713489631284,0,0.136499911407986,0.424216295861138,0,0,0,0.438450885253763,0,0.655894752046633,0,0.6196469961995,0,0,0.0982490410131212,0,0,0.633322905892992,0,0,0,0.192444225451024,0,0,1.22386941009813,0,0,0,0,0,0,2.84823593587081,3.33524485640905,2.46817363851717,0,1.08006287447623,0.79312517629427,0.640944426764839,0,0,0.185803175125719,0,0.213425530045242,0.159426272728822,1.59663497146253,0.191505370132367,1.05836791361941,0,0.561594356226918,1.36940807419915,0.470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| |||
|short_description=p@chr16:3926397..3926401,- | |||
}} |
Revision as of 02:04, 12 January 2014
Short description: | p@chr16:3926397..3926401, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr16:3926397..3926401, - |
Coexpression cluster: | C492_CD14_CD4_Neutrophils_CD8_Natural_CD19_Peripheral |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
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CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
defensive cell | 1.06e-35 | 48 |
phagocyte | 1.06e-35 | 48 |
classical monocyte | 3.08e-35 | 42 |
CD14-positive, CD16-negative classical monocyte | 3.08e-35 | 42 |
leukocyte | 1.56e-31 | 136 |
nongranular leukocyte | 5.12e-31 | 115 |
myeloid leukocyte | 8.39e-31 | 72 |
macrophage dendritic cell progenitor | 1.67e-30 | 61 |
monopoietic cell | 7.81e-30 | 59 |
monocyte | 7.81e-30 | 59 |
monoblast | 7.81e-30 | 59 |
promonocyte | 7.81e-30 | 59 |
hematopoietic stem cell | 6.17e-27 | 168 |
granulocyte monocyte progenitor cell | 1.04e-26 | 67 |
hematopoietic lineage restricted progenitor cell | 2.91e-26 | 120 |
myeloid lineage restricted progenitor cell | 1.89e-25 | 66 |
hematopoietic cell | 1.42e-24 | 177 |
hematopoietic oligopotent progenitor cell | 3.14e-24 | 161 |
hematopoietic multipotent progenitor cell | 3.14e-24 | 161 |
myeloid cell | 1.36e-21 | 108 |
common myeloid progenitor | 1.36e-21 | 108 |
intermediate monocyte | 5.18e-09 | 9 |
CD14-positive, CD16-positive monocyte | 5.18e-09 | 9 |
CD4-positive, alpha-beta T cell | 4.00e-07 | 6 |
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 1.50e-25 | 98 |
blood island | 1.50e-25 | 98 |
bone marrow | 1.60e-23 | 76 |
hemolymphoid system | 4.17e-23 | 108 |
bone element | 6.25e-21 | 82 |
immune system | 2.64e-19 | 93 |
skeletal element | 4.95e-18 | 90 |
skeletal system | 4.33e-15 | 100 |
neural tube | 8.61e-10 | 56 |
neural rod | 8.61e-10 | 56 |
future spinal cord | 8.61e-10 | 56 |
neural keel | 8.61e-10 | 56 |
regional part of nervous system | 1.42e-09 | 53 |
regional part of brain | 1.42e-09 | 53 |
regional part of forebrain | 7.33e-09 | 41 |
forebrain | 7.33e-09 | 41 |
anterior neural tube | 7.33e-09 | 41 |
future forebrain | 7.33e-09 | 41 |
brain grey matter | 8.67e-08 | 34 |
gray matter | 8.67e-08 | 34 |
brain | 9.84e-08 | 68 |
future brain | 9.84e-08 | 68 |
regional part of telencephalon | 2.65e-07 | 32 |
neocortex | 4.87e-07 | 20 |
central nervous system | 6.60e-07 | 81 |