FFCP PHASE1:Hg19::chr17:26989255..26989297,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=6830 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=11470 | |||
|TSSclassifier=strong | |||
|UniProt=Q7KZ85 | |||
|association_with_transcript=-4bp_to_ENST00000314616,ENST00000347486,NM_003170,uc002hby.2,uc010crt.2_5end | |||
|description=CAGE_peak_2_at_SUPT6H_5end | |||
|id=chr17:26989255..26989297,+ | |||
|ontology_enrichment_celltype=CL:0002057!1.61e-11!42;CL:0000860!1.03e-10!45;CL:0000766!6.09e-09!76;CL:0000557!2.92e-08!71;CL:0002009!1.35e-07!65;CL:0000839!1.65e-07!70;CL:0002194!3.41e-07!63;CL:0000576!3.41e-07!63;CL:0000040!3.41e-07!63;CL:0000559!3.41e-07!63 | |||
|ontology_enrichment_celltype_v019=CL:0000860;1.48e-15;33!CL:0002057;1.48e-15;33!CL:0000473;1.62e-09;39!CL:0000234;1.62e-09;39!CL:0000576;6.92e-07;48 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,1.61e-11,42;CL:0002057,1.61e-11,42;CL:0000766,2.77e-09,72;CL:0000557,1.35e-08,67;CL:0000473,1.44e-08,48;CL:0000234,1.44e-08,48;CL:0002009,6.24e-08,61;CL:0000839,8.20e-08,66;CL:0002194,1.62e-07,59;CL:0000576,1.62e-07,59;CL:0000040,1.62e-07,59;CL:0000559,1.62e-07,59 | |||
|ontology_enrichment_development_v019=CL:0002057;5.00e-09;42 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000073!2.33e-14!94;UBERON:0001016!2.33e-14!94;UBERON:0000955!3.22e-13!69;UBERON:0006238!3.22e-13!69;UBERON:0005743!7.86e-13!86;UBERON:0001017!1.45e-12!82;UBERON:0001049!4.94e-12!57;UBERON:0005068!4.94e-12!57;UBERON:0006241!4.94e-12!57;UBERON:0007135!4.94e-12!57;UBERON:0002780!4.13e-11!41;UBERON:0001890!4.13e-11!41;UBERON:0006240!4.13e-11!41;UBERON:0002616!1.15e-10!59;UBERON:0003080!2.49e-10!42;UBERON:0001893!2.44e-09!34;UBERON:0001869!3.68e-09!32;UBERON:0002020!4.28e-09!34;UBERON:0003528!4.28e-09!34;UBERON:0002791!5.02e-09!33;UBERON:0002619!2.05e-08!22;UBERON:0001474!2.82e-08!86;UBERON:0002346!3.19e-08!90;UBERON:0003075!8.18e-08!86;UBERON:0007284!8.18e-08!86;UBERON:0001950!1.63e-07!20;UBERON:0002371!3.77e-07!80;UBERON:0000468!6.31e-07!659;UBERON:0003056!6.49e-07!61 | |||
|ontology_enrichment_uberon_v019=UBERON:0002619;2.53e-08;22!UBERON:0001893;2.91e-08;34!UBERON:0002780;3.13e-08;41!UBERON:0001890;3.13e-08;41!UBERON:0001869;3.52e-08;32!UBERON:0001017;3.65e-08;75!UBERON:0002791;6.76e-08;32!UBERON:0003528;7.24e-08;34!UBERON:0002020;7.24e-08;34!UBERON:0001950;2.02e-07;20!UBERON:0000073;2.60e-07;53!UBERON:0002616;2.60e-07;53!UBERON:0001016;3.54e-07;83 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001016,1.10e-14,89;UBERON:0000955,6.80e-14,68;UBERON:0006238,6.80e-14,68;UBERON:0001017,3.73e-13,81;UBERON:0001049,9.45e-13,56;UBERON:0005068,9.45e-13,56;UBERON:0006241,9.45e-13,56;UBERON:0007135,9.45e-13,56;UBERON:0000073,4.44e-12,53;UBERON:0002616,4.44e-12,53;UBERON:0002780,4.13e-11,41;UBERON:0001890,4.13e-11,41;UBERON:0003080,4.13e-11,41;UBERON:0006240,4.13e-11,41;UBERON:0001893,2.44e-09,34;UBERON:0001869,3.68e-09,32;UBERON:0003528,4.28e-09,34;UBERON:0002020,4.28e-09,34;UBERON:0002791,8.44e-09,32;UBERON:0002346,1.28e-08,86;UBERON:0001474,1.52e-08,82;UBERON:0002619,2.05e-08,22;UBERON:0003075,3.30e-08,82;UBERON:0007284,3.30e-08,82;UBERON:0003056,1.14e-07,61;UBERON:0001950,1.63e-07,20;UBERON:0002371,2.15e-07,76;UBERON:0002405,2.84e-07,93;UBERON:0004765,2.94e-07,90 | |||
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| |||
|short_description=p2@SUPT6H | |||
}} |
Revision as of 14:25, 20 January 2014
Short description: | p2@SUPT6H |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_SUPT6H_5end |
Coexpression cluster: | NA |
Association with transcript: | -4bp_to_ENST00000314616, ENST00000347486, NM_003170, uc002hby.2, uc010crt.2_5end |
EntrezGene: | SUPT6H |
HGNC: | 11470 |
UniProt: | Q7KZ85 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
classical monocyte | 1.61e-11 | 42 |
CD14-positive, CD16-negative classical monocyte | 1.61e-11 | 42 |
myeloid leukocyte | 2.77e-09 | 72 |
granulocyte monocyte progenitor cell | 1.35e-08 | 67 |
defensive cell | 1.44e-08 | 48 |
phagocyte | 1.44e-08 | 48 |
macrophage dendritic cell progenitor | 6.24e-08 | 61 |
myeloid lineage restricted progenitor cell | 8.20e-08 | 66 |
monopoietic cell | 1.62e-07 | 59 |
monocyte | 1.62e-07 | 59 |
monoblast | 1.62e-07 | 59 |
promonocyte | 1.62e-07 | 59 |
Ontology term | p-value | n |
---|---|---|
nervous system | 1.10e-14 | 89 |
brain | 6.80e-14 | 68 |
future brain | 6.80e-14 | 68 |
central nervous system | 3.73e-13 | 81 |
neural tube | 9.45e-13 | 56 |
neural rod | 9.45e-13 | 56 |
future spinal cord | 9.45e-13 | 56 |
neural keel | 9.45e-13 | 56 |
regional part of nervous system | 4.44e-12 | 53 |
regional part of brain | 4.44e-12 | 53 |
regional part of forebrain | 4.13e-11 | 41 |
forebrain | 4.13e-11 | 41 |
anterior neural tube | 4.13e-11 | 41 |
future forebrain | 4.13e-11 | 41 |
telencephalon | 2.44e-09 | 34 |
cerebral hemisphere | 3.68e-09 | 32 |
brain grey matter | 4.28e-09 | 34 |
gray matter | 4.28e-09 | 34 |
regional part of telencephalon | 8.44e-09 | 32 |
neurectoderm | 1.28e-08 | 86 |
bone element | 1.52e-08 | 82 |
regional part of cerebral cortex | 2.05e-08 | 22 |
neural plate | 3.30e-08 | 82 |
presumptive neural plate | 3.30e-08 | 82 |
pre-chordal neural plate | 1.14e-07 | 61 |
neocortex | 1.63e-07 | 20 |
bone marrow | 2.15e-07 | 76 |
immune system | 2.84e-07 | 93 |
skeletal element | 2.94e-07 | 90 |