FFCP PHASE1:Hg19::chr18:19411406..19411417,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene= | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA | |||
|HGNC= | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=-39bp_to_uc002kts.2_5end | |||
|coexpression_cluster_id=C20 | |||
|description=CAGE_peak_3_at_uc002kts.2_5end | |||
|id=chr18:19411406..19411417,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0004140;3.06e-09;1!UBERON:0006603;3.31e-09;65!UBERON:0004874;3.72e-09;1!UBERON:0010227;6.16e-09;1!UBERON:0010226;8.05e-09;1!UBERON:0000358;1.09e-08;1!UBERON:0005062;1.92e-08;4!UBERON:0007284;1.92e-08;4 | |||
|ontology_enrichment_disease=DOID:114!5.09e-08!2 | |||
|ontology_enrichment_disease_v019=DOID:114;3.31e-16;2!DOID:178;9.02e-09;1!DOID:326;9.02e-09;1!DOID:3978;9.02e-09;1!DOID:3394;9.02e-09;1!DOID:5844;9.02e-09;1!DOID:1287;1.51e-08;4 | |||
|ontology_enrichment_disease_v019_2=DOID:114,3.18e-16,2;DOID:178,9.02e-09,1;DOID:326,9.02e-09,1;DOID:3978,9.02e-09,1;DOID:3394,9.02e-09,1;DOID:5844,9.02e-09,1;DOID:1287,1.48e-08,4 | |||
|ontology_enrichment_uberon=UBERON:0007023!8.86e-36!115;UBERON:0000341!4.60e-08!2;UBERON:0001630!7.35e-08!2;UBERON:0005090!7.35e-08!2;UBERON:0003103!2.84e-07!69;UBERON:0003127!3.47e-07!2;UBERON:0007100!7.75e-07!27 | |||
|ontology_enrichment_uberon_v019=UBERON:0007100;3.75e-18;25!UBERON:0000341;2.44e-16;2!UBERON:0005090;7.31e-16;2!UBERON:0001630;7.31e-16;2!UBERON:0001723;2.35e-11;3!UBERON:0001033;2.35e-11;3!UBERON:0004151;5.28e-11;3!UBERON:0003978;5.69e-11;3!UBERON:0000946;5.69e-11;3!UBERON:0000989;3.72e-09;1!UBERON:0008811;3.72e-09;1!UBERON:0002079;6.16e-09;1!UBERON:0002146;6.91e-09;1!UBERON:0002426;6.91e-09;1!UBERON:0003831;6.91e-09;1!UBERON:0003898;6.91e-09;1!UBERON:0004830;6.91e-09;1!UBERON:0005623;6.91e-09;1!UBERON:0003830;6.91e-09;1!UBERON:0005175;6.91e-09;1!UBERON:0001774;6.91e-09;1!UBERON:0001103;6.91e-09;1!UBERON:0002084;8.05e-09;1!UBERON:0002135;8.05e-09;1!UBERON:0002082;8.05e-09;1!UBERON:0001389;1.09e-08;1!UBERON:0000026;1.09e-08;1!UBERON:0008784;1.09e-08;1!UBERON:0006058;1.09e-08;1!UBERON:0003663;1.09e-08;1!UBERON:0004256;1.09e-08;1!UBERON:0004708;1.09e-08;1!UBERON:0002101;1.09e-08;1!UBERON:0004709;1.09e-08;1!UBERON:0002529;1.09e-08;1!UBERON:0010538;1.09e-08;1!UBERON:0003661;1.09e-08;1!UBERON:0010890;1.09e-08;1!UBERON:0002471;1.09e-08;1!UBERON:0001383;1.09e-08;1!UBERON:0010758;1.09e-08;1!UBERON:0010707;1.09e-08;1!UBERON:0000978;1.09e-08;1!UBERON:0002103;1.09e-08;1!UBERON:0001665;1.09e-08;1!UBERON:0003823;1.09e-08;1!UBERON:0000154;1.09e-08;1!UBERON:0010709;1.09e-08;1!UBERON:0007029;1.71e-08;1!UBERON:0001301;1.71e-08;1!UBERON:0000948;1.87e-08;22!UBERON:0000922;3.52e-08;49!UBERON:0001134;9.94e-08;16!UBERON:0002036;9.94e-08;16 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007100,1.03e-16,27;UBERON:0000341,2.53e-16,2;UBERON:0005090,7.31e-16,2;UBERON:0001630,7.31e-16,2;UBERON:0003103,1.06e-13,68;UBERON:0007023,1.23e-13,114;UBERON:0001723,2.29e-11,3;UBERON:0001033,2.29e-11,3;UBERON:0010056,2.29e-11,3;UBERON:0003978,5.41e-11,3;UBERON:0009751,5.41e-11,3;UBERON:0004151,5.41e-11,3;UBERON:0000946,5.41e-11,3;UBERON:0002523,5.41e-11,3;UBERON:0005983,5.41e-11,3;UBERON:0002165,5.41e-11,3;UBERON:0002062,5.41e-11,3;UBERON:0007280,5.41e-11,3;UBERON:0000989,3.87e-09,1;UBERON:0008811,3.87e-09,1;UBERON:0006258,3.87e-09,1;UBERON:0005876,3.87e-09,1;UBERON:0004874,3.87e-09,1;UBERON:0002079,6.16e-09,1;UBERON:0002146,6.65e-09,1;UBERON:0005623,6.65e-09,1;UBERON:0002426,7.18e-09,1;UBERON:0003831,7.18e-09,1;UBERON:0003898,7.18e-09,1;UBERON:0004830,7.18e-09,1;UBERON:0003830,7.18e-09,1;UBERON:0005175,7.18e-09,1;UBERON:0001774,7.18e-09,1;UBERON:0001103,7.18e-09,1;UBERON:0010084,7.18e-09,1;UBERON:0002135,7.75e-09,1;UBERON:0002084,8.36e-09,1;UBERON:0002082,8.36e-09,1;UBERON:0010226,8.36e-09,1;UBERON:0005418,1.05e-08,1;UBERON:0001389,1.05e-08,1;UBERON:0000026,1.05e-08,1;UBERON:0008784,1.05e-08,1;UBERON:0006058,1.05e-08,1;UBERON:0003663,1.05e-08,1;UBERON:0004256,1.05e-08,1;UBERON:0004708,1.05e-08,1;UBERON:0002101,1.05e-08,1;UBERON:0004709,1.05e-08,1;UBERON:0002529,1.05e-08,1;UBERON:0010538,1.05e-08,1;UBERON:0003661,1.05e-08,1;UBERON:0010890,1.05e-08,1;UBERON:0002471,1.05e-08,1;UBERON:0001383,1.05e-08,1;UBERON:0004357,1.05e-08,1;UBERON:0004347,1.05e-08,1;UBERON:0005420,1.05e-08,1;UBERON:0005732,1.05e-08,1;UBERON:0010758,1.05e-08,1;UBERON:0010707,1.05e-08,1;UBERON:0000978,1.05e-08,1;UBERON:0002103,1.05e-08,1;UBERON:0001665,1.05e-08,1;UBERON:0003823,1.05e-08,1;UBERON:0000154,1.05e-08,1;UBERON:0010709,1.05e-08,1;UBERON:0005733,1.05e-08,1;UBERON:0005730,1.05e-08,1;UBERON:0007029,1.32e-08,1;UBERON:0001301,2.22e-08,1;UBERON:0000948,9.84e-08,24;UBERON:0005498,9.84e-08,24;UBERON:0004140,9.84e-08,24;UBERON:0009881,9.84e-08,24;UBERON:0004141,9.84e-08,24;UBERON:0003084,9.84e-08,24;UBERON:0007005,9.84e-08,24;UBERON:0004139,9.84e-08,24;UBERON:0004291,9.84e-08,24 | |||
|phase1_expression=0.181678379270557,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.130979075497713,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.26593811658487,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144781306667579,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.131124414959424,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103041011647722,0,0,0,0,0,0,0,0,0,0,0,0,0.623224249527161,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.75809815126273,0,0,0,0,0,0,0,0,0,0,0,0.19924798825107,0,0,0,0,0,0,0,0,0.493217028184668,0,0,0.969332746095218,0.371072392647405,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.230850775511391,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.995261931078505,0.0884575645033392,0.611030144933625,0,0,0,0,6.42062117839031,0,0,0,0,0.394584402849391,0,0,0.126373159256976,0,0,0,0,0,0,0,0,0,0,0,1.04836000945218,0,0,0,0,0.872901148395775,0,1.12990370390266,0,0,0.126621591911757,0,0,0.213452994739353,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.30636562417283,6.87481272035051,0,4.5926170114768,12.4475553959606,1.11585728720936,21.834628558186,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0607495566580247,0,0,0.104909176269996,0,0,0,7.14695326373367,5.29673576292345,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.314408610199332,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.414775308455192,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0752103283492573,0,0,0,0,0,0,0,0,0,0,0,12.4052794597324,0,0,0,0,0,0,0,0,0,0,0.0657727735628491,0,0,0.235479278551542,0,0,0,0,0,1.21510125100316,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.58971534875158,10.6769319130497,10.4383298820438,1.94284397223656,0,0,0,0,0,0,0.154348316215889,0.218559560503957,0,1.47088993052343,0,0,0,0,0,0.0939839179798536,0,0,0,0,0,2.19100916473955,0,0,0,0,0,0.5290268405154,0,0,0,0,0,0,0,0,0,0,0,0,0,0,11.088167058851,9.9987061214771,0.0645889098360061,0,0,0.0636471582781649,1.41482032270754,11.321270890642,20.1917647640316,0.26940821205835,0.0717222053926763,2.99394320891412,0,0,0,0,2.34640942403454,0.122241444182866,0.813792356631477,0,0.201273793591026,0 | |||
|short_description=p3@uc002kts.2 | |||
}} |
Revision as of 18:43, 20 January 2014
Short description: | p3@uc002kts.2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_uc002kts.2_5end |
Coexpression cluster: | C20_heart_left_skeletal_diaphragm_tongue_umbilical_throat |
Association with transcript: | -39bp_to_uc002kts.2_5end |
EntrezGene: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
heart disease | 3.18e-16 | 2 |
vascular disease | 9.02e-09 | 1 |
ischemia | 9.02e-09 | 1 |
extrinsic cardiomyopathy | 9.02e-09 | 1 |
myocardial ischemia | 9.02e-09 | 1 |
myocardial infarction | 9.02e-09 | 1 |
cardiovascular system disease | 1.48e-08 | 4 |