FFCP PHASE1:Hg19::chr1:6086354..6086365,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=8514 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=6229 | |||
|TSSclassifier=strong | |||
|UniProt=Q5TG81,Q5TG80 | |||
|association_with_transcript=0bp_to_ENST00000389632,ENST00000428161_5end | |||
|coexpression_cluster_id=C2595 | |||
|description=CAGE_peak_4_at_KCNAB2_5end | |||
|id=chr1:6086354..6086365,+ | |||
|ontology_enrichment_celltype=CL:0000037!6.24e-77!172;CL:0000566!6.24e-77!172;CL:0000988!2.82e-73!182;CL:0002032!6.61e-73!165;CL:0000837!6.61e-73!165;CL:0000738!5.57e-67!140;CL:0002087!2.59e-60!119;CL:0002031!1.20e-58!124;CL:0000763!2.66e-53!112;CL:0000049!2.66e-53!112;CL:0000766!3.20e-48!76;CL:0000839!2.81e-43!70;CL:0000557!1.44e-42!71;CL:0002194!2.21e-42!63;CL:0000576!2.21e-42!63;CL:0000040!2.21e-42!63;CL:0000559!2.21e-42!63;CL:0002009!2.97e-41!65;CL:0000860!7.65e-32!45;CL:0002057!3.41e-31!42;CL:0000542!2.69e-16!53;CL:0000051!2.69e-16!53;CL:0000838!7.38e-16!52;CL:0000134!7.51e-13!358;CL:0000219!2.44e-12!390;CL:0002320!1.17e-11!365;CL:0000084!1.37e-09!25;CL:0000827!1.37e-09!25;CL:0002393!5.39e-07!9;CL:0002397!5.39e-07!9 | |||
|ontology_enrichment_celltype_v019=CL:0000473;2.31e-34;39!CL:0000234;2.31e-34;39!CL:0000860;6.59e-34;33!CL:0002057;6.59e-34;33!CL:0000576;1.54e-32;48!CL:0000766;7.17e-29;69!CL:0000763;4.95e-24;100!CL:0002087;1.48e-18;104!CL:0000738;2.53e-17;136!CL:0000988;3.61e-15;177!CL:0000235;7.12e-09;6!CL:0000094;2.18e-08;8!CL:0000219;4.26e-07;193!CL:0000542;4.99e-07;53!CL:0000081;5.32e-07;11 | |||
|ontology_enrichment_celltype_v019_2=CL:0000037,8.83e-94,168;CL:0000988,4.90e-92,177;CL:0002032,3.55e-89,161;CL:0000837,3.55e-89,161;CL:0000738,1.15e-78,136;CL:0000763,1.66e-76,108;CL:0000049,1.66e-76,108;CL:0002087,2.89e-72,115;CL:0000766,3.89e-72,72;CL:0002031,1.18e-68,120;CL:0000839,2.16e-63,66;CL:0002194,2.93e-63,59;CL:0000576,2.93e-63,59;CL:0000040,2.93e-63,59;CL:0000559,2.93e-63,59;CL:0000557,1.17e-62,67;CL:0002009,1.91e-60,61;CL:0000473,3.93e-53,48;CL:0000234,3.93e-53,48;CL:0000860,1.66e-45,42;CL:0002057,1.66e-45,42;CL:0000219,8.68e-25,386;CL:0000134,3.45e-24,354;CL:0002320,5.83e-23,361;CL:0000048,1.27e-13,427;CL:0000723,6.08e-13,433;CL:0000542,1.32e-12,53;CL:0000051,1.32e-12,53;CL:0000034,1.55e-12,441;CL:0000838,4.60e-12,52;CL:0002393,1.31e-09,9;CL:0002397,1.31e-09,9;CL:0000235,7.32e-09,6;CL:0000094,1.51e-08,8;CL:0000081,4.46e-07,11 | |||
|ontology_enrichment_development_v019=CL:0002057;9.25e-33;42!CL:0000049;1.69e-21;108!CL:0000051;4.99e-07;53 | |||
|ontology_enrichment_disease=DOID:2531!1.63e-15!51;DOID:0060083!1.63e-15!51;DOID:1240!3.84e-12!39;DOID:8692!5.78e-09!31 | |||
|ontology_enrichment_disease_v019=DOID:1240;8.23e-14;39!DOID:8692;3.82e-13;31!DOID:2531;1.68e-12;51!DOID:0060083;1.68e-12;51 | |||
|ontology_enrichment_disease_v019_2=DOID:2531,2.17e-20,51;DOID:0060083,2.17e-20,51;DOID:1240,9.25e-18,39;DOID:8692,1.06e-13,31 | |||
|ontology_enrichment_uberon=UBERON:0002390!2.08e-47!102;UBERON:0003061!2.08e-47!102;UBERON:0002193!1.68e-41!112;UBERON:0002371!1.83e-37!80;UBERON:0001474!1.70e-32!86;UBERON:0002405!1.03e-27!115;UBERON:0004765!6.27e-23!101;UBERON:0001434!6.27e-23!101;UBERON:0002384!4.11e-11!375;UBERON:0003081!1.05e-07!216;UBERON:0000178!3.44e-07!15;UBERON:0000179!3.44e-07!15;UBERON:0000463!3.44e-07!15;UBERON:0002204!7.05e-07!167 | |||
|ontology_enrichment_uberon_v019=UBERON:0000178;4.63e-10;15!UBERON:0000179;4.63e-10;15!UBERON:0000463;4.63e-10;15!UBERON:0002390;4.67e-08;32 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,8.63e-68,98;UBERON:0003061,8.63e-68,98;UBERON:0002193,1.03e-58,108;UBERON:0002371,1.23e-55,76;UBERON:0001474,8.90e-50,82;UBERON:0002405,1.37e-48,93;UBERON:0004765,3.36e-43,90;UBERON:0001434,1.70e-36,100;UBERON:0002384,7.62e-22,371;UBERON:0003081,3.73e-18,203;UBERON:0002204,3.43e-13,167;UBERON:0000178,3.38e-10,15;UBERON:0000179,3.38e-10,15;UBERON:0000463,3.38e-10,15 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.602694528023977,0,0,0,0,0,0,0,0,3.20936304141395,3.11982239909794,3.54198515911557,3.93364276848904,4.98978217526377,4.4896675761662,0,0,0,0.697204805222715,1.13735385989937,2.05520307534393,3.87796785972314,3.20871115952227,3.03815219002193,5.15005590751826,5.18229865630367,4.89393578504954,12.6496467738221,11.3362783106643,12.3717871205786,9.76201955003875,13.5685403047203,10.5300166104335,8.63077176966451,6.91633907628572,8.74984250587765,5.17118521104928,8.39130088658974,5.41705946377367,12.8004790888971,15.8285567033551,13.0339620978149,8.87643287875617,15.0836642725764,9.59005688698562,8.2462825046679,13.3640650606493,6.81959600852311,4.35313857942876,7.37600792098482,4.35975574296902,8.29120595347253,6.25779502104242,9.33912032232002,8.47559303686716,5.89244217580104,5.69632297393592,7.39393502091796,5.74031609905618,3.14487968262564,4.94245977044578,5.55654503513573,3.37523732063868,6.55529310604872,5.56966696157452,6.02791707423292,1.75996244461323,0.546138611262131,0,0.426730222566507,1.20118796110804,0,0,0.954053754535364,1.1384259382189,1.17447437874188,2.29363936875137,0,0.560508562981536,2.63384084775077,0.786839080455332,1.57204305099666,1.43921049299656,3.17654341242288,0.32592226663359,1.89379122293893,1.94826728407911,4.45641827540694,2.94605907474837,1.10766947291811,0.541607727530031,2.68991771423918,2.21100890851793,4.60426132890293,1.38175008892924,7.53488022911136,4.59688345802387,0.535081656179426,2.09071047609954,5.66546713487831,2.68254345521345,1.37450978193052,1.77113784413652,0.637130828648193,0.651083453856419,0.950452044448374,0.301150238155546,0.895906278080929,0,2.13099526839615,0.821127996921047,2.01606743224732,1.33720097891754,1.73789284659359,0,0,0,0,0,0,0,0,0,0,0,0.458426764241994,0,0,11.3591587779139,9.22887607686116,14.8912915781129,2.14641561874808,2.85997455390064,1.48583000531826,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,10.5424333948851,7.75560528296651,0,0,0,0,0,0.354668382198357,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.140450806702248,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.161646056818812,0,0,0,0,0,0,0,0,0.232387885739037,0,0,0,3.12899064659632,1.92972281457866,0,0,0,0.946454400318751,0.842923450390509,0.482022059766964,0.55146986366197,0.871517776369625,0.237270619111097,0.808987848960987,0.98110732562673,0.769494313892781,0,0,0,0,0,0.982827216677626,0,0.441463099414651,1.10689594688802,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,8.8638122191463,22.6984137185061,14.4172227420066,0,0,0,0,0,0,0,1.93706554829097,2.07328115540772,1.44119953416961,2.01987893482208,20.8908072221236,30.9410624702205,26.9600128583108,20.5286935227246,8.94599186518914,4.80548892550268,27.1535110999049,0,0,0,0.129271715757778,0,0,0,0,0.257207374262142,0,0,0,0,0,0,0,0,0.301439377059586,0,0.099972991182057,21.8922805154143,8.03611346291402,21.0833939483032,0,0,0,0,0.205476322550383,0.179060963239896,5.26800176769578,2.56139988262505,1.94064817373566,2.31017465303547,0,0,0,0.167516265334349,0,2.24702107184155,2.99161459204025,3.72973962092432,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.89475236572042,3.23571301227925,3.73546452312055,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.0877350463246,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.438519753291869,1.0457418040996,1.79515087581472,0.656029291399411,4.22991913063594,0.309123034943167,0,0,0,0,0,0,0,0,0,0,0,0.0852266274161009,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179872457583315,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.6196469961995,0,0,0,0,0,0,0,0,0,0,0,0,0.659006605437454,0,0,0,0,1.52234282769651,0,3.41788312304498,2.38231775457789,2.46817363851717,1.94541993357815,1.62009431171434,1.58625035258854,0,0,0,2.22963810150862,0.144269212976445,1.63626239701352,4.46393563640703,7.38443674301421,11.1073114676773,5.92686031626872,4.86932910411833,6.73913227472301,6.16233633389619,14.1011906195721,12.5317238545034,6.09450400085772,11.7229294825701,8.27378799483295,3.40676990152261,4.12206413706918,7.68101910771145,7.60498766834214,7.17451309361207,14.2633309643489,0.278406173895242,0,0,1.6653598399891,0,0.748562161632879,0.73254089635947,0,2.67464122265948,0,0,0.890894042497916,0.614321404198464,0,0,0,7.41617434020418,0,0,0.552567831062295,0,0,2.95403533106567,0,0.0898683511473268,0,3.06943422136123,0.0986434056369336,2.3948309234694,0,0,0.185536196323703,0,0,0,0,0.1137934482855,0.254253650292766,0.472775363535873,0,1.16641845353302,0,0,0.241192877250816,0,0.110579259931225,0,0,0.544692317594951,0.139423744278603,0.0769502585037971,0.341826167541004,0,0,0,0,0.0915975934018623,0,4.08773192782946,4.70940769185074,2.99181027420282,0,0,0,0,1.11255605286265,0,0.163232808159148,0,0,0,0.265372693510018,0,2.07564790076435,5.06612149680662,4.28129992972367,0,0,0,0.182454789215666,0,0,0,0,0.61214552326098,1.13735843331278,0,0,0,0,0,0,0,0,0,0,0.174118413160805,0,0,0.967563312890852,1.0232504392066,0.903270027585302,0.193978032976839,0,0.225980740780532,0,2.78200456384186,0.189932387867636,0.391102765469606,0,0,0.19980960958213,0.576361668616424,0,1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| |||
|short_description=p4@KCNAB2 | |||
}} |
Revision as of 16:00, 10 January 2014
Short description: | p4@KCNAB2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_KCNAB2_5end |
Coexpression cluster: | C2595_Melanocyte_granulocyte_Monocytederived_CD14_acute_CD4_Macrophage |
Association with transcript: | 0bp_to_ENST00000389632, ENST00000428161_5end |
EntrezGene: | KCNAB2 |
HGNC: | 6229 |
UniProt: | Q5TG81Q5TG80 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 8.63e-68 | 98 |
blood island | 8.63e-68 | 98 |
hemolymphoid system | 1.03e-58 | 108 |
bone marrow | 1.23e-55 | 76 |
bone element | 8.90e-50 | 82 |
immune system | 1.37e-48 | 93 |
skeletal element | 3.36e-43 | 90 |
skeletal system | 1.70e-36 | 100 |
connective tissue | 7.62e-22 | 371 |
lateral plate mesoderm | 3.73e-18 | 203 |
musculoskeletal system | 3.43e-13 | 167 |
blood | 3.38e-10 | 15 |
haemolymphatic fluid | 3.38e-10 | 15 |
organism substance | 3.38e-10 | 15 |
Ontology term | p-value | n |
---|---|---|
hematologic cancer | 2.17e-20 | 51 |
immune system cancer | 2.17e-20 | 51 |
leukemia | 9.25e-18 | 39 |
myeloid leukemia | 1.06e-13 | 31 |