FFCP PHASE1:Hg19::chr20:34680669..34680680,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=2036 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=3378 | |||
|TSSclassifier=strong | |||
|UniProt=Q4VXN1,Q4VXN5 | |||
|association_with_transcript=15bp_to_ENST00000397307,ENST00000452261_5end | |||
|description=CAGE_peak_11_at_EPB41L1_5end | |||
|id=chr20:34680669..34680680,+ | |||
|ontology_enrichment_celltype=CL:0000066!2.44e-09!254 | |||
|ontology_enrichment_celltype_v019=CL:0000097;3.11e-13;5!CL:0000163;2.39e-07;9!CL:0000136;3.25e-07;13 | |||
|ontology_enrichment_celltype_v019_2=CL:0000097,4.65e-13,5;CL:0002028,4.65e-13,5;CL:0000163,2.96e-07,9 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:305!2.06e-10!106 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0005743!5.95e-15!86;UBERON:0001049!1.06e-14!57;UBERON:0005068!1.06e-14!57;UBERON:0006241!1.06e-14!57;UBERON:0007135!1.06e-14!57;UBERON:0000955!7.96e-14!69;UBERON:0006238!7.96e-14!69;UBERON:0001017!1.97e-13!82;UBERON:0000073!1.06e-12!94;UBERON:0001016!1.06e-12!94;UBERON:0007023!1.75e-12!115;UBERON:0002616!3.64e-12!59;UBERON:0002780!5.73e-12!41;UBERON:0001890!5.73e-12!41;UBERON:0006240!5.73e-12!41;UBERON:0003075!1.23e-11!86;UBERON:0007284!1.23e-11!86;UBERON:0003080!2.17e-11!42;UBERON:0002020!6.04e-11!34;UBERON:0003528!6.04e-11!34;UBERON:0001869!6.91e-11!32;UBERON:0001950!7.59e-11!20;UBERON:0001893!1.32e-10!34;UBERON:0002619!2.40e-10!22;UBERON:0002346!2.72e-10!90;UBERON:0002791!5.47e-10!33;UBERON:0003056!1.77e-09!61;UBERON:0000062!6.65e-09!511;UBERON:0000956!7.01e-09!25;UBERON:0000203!7.01e-09!25;UBERON:0000033!1.45e-08!123;UBERON:0000153!2.50e-08!129;UBERON:0007811!2.50e-08!129;UBERON:0000064!4.35e-08!219 | |||
|ontology_enrichment_uberon_v019=UBERON:0001950;1.49e-19;20!UBERON:0002619;1.19e-17;22!UBERON:0000956;2.41e-15;25!UBERON:0000203;2.41e-15;25!UBERON:0001869;2.54e-15;32!UBERON:0003528;7.72e-15;34!UBERON:0002020;7.72e-15;34!UBERON:0001893;8.13e-15;34!UBERON:0002791;8.33e-13;32!UBERON:0002298;4.06e-10;6!UBERON:0002780;2.54e-09;41!UBERON:0001890;2.54e-09;41!UBERON:0000073;4.19e-09;53!UBERON:0002616;4.19e-09;53!UBERON:0001871;6.69e-09;6!UBERON:0002148;2.06e-08;2!UBERON:0006331;2.06e-08;2!UBERON:0009662;2.06e-08;2!UBERON:0000955;1.40e-07;68!UBERON:0001017;2.43e-07;75!UBERON:0002021;3.08e-07;5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001950,4.85e-20,20;UBERON:0003528,3.48e-18,34;UBERON:0002020,3.48e-18,34;UBERON:0002619,4.33e-18,22;UBERON:0001869,1.36e-16,32;UBERON:0000073,2.77e-16,53;UBERON:0002616,2.77e-16,53;UBERON:0000956,9.93e-16,25;UBERON:0000203,9.93e-16,25;UBERON:0001893,1.78e-15,34;UBERON:0001049,3.27e-15,56;UBERON:0005068,3.27e-15,56;UBERON:0006241,3.27e-15,56;UBERON:0007135,3.27e-15,56;UBERON:0002791,4.09e-14,32;UBERON:0000955,2.69e-13,68;UBERON:0006238,2.69e-13,68;UBERON:0002780,2.07e-12,41;UBERON:0001890,2.07e-12,41;UBERON:0003080,2.07e-12,41;UBERON:0006240,2.07e-12,41;UBERON:0001017,6.85e-12,81;UBERON:0002298,1.62e-10,6;UBERON:0003075,1.81e-10,82;UBERON:0007284,1.81e-10,82;UBERON:0001016,2.71e-10,89;UBERON:0002346,8.48e-10,86;UBERON:0001871,3.63e-09,6;UBERON:0003056,8.42e-09,61;UBERON:0002148,1.32e-08,2;UBERON:0006331,1.32e-08,2;UBERON:0009662,1.32e-08,2;UBERON:0010371,2.02e-08,104;UBERON:0007023,2.22e-08,114;UBERON:0002021,2.39e-07,5 | |||
|phase1_expression=0,1.07050261945492,0.281908808191942,0,0.446961094427288,0,0,0,0,0.737201809504527,0.697801167972428,0.218441372130172,0.263766978228454,0.123766352960047,0,0,0.602694528023977,0,0,0.123121058076788,0,0,0,0,0.125542639594803,0,0,0,0,0.383829398097213,0,0,0.30120591877825,0,0,0,0,0,0,0,0,0.32389366601898,0.257575567634187,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.605399502633369,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.587237189370939,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.44575660953827,1.00267582127178,0.434539556882471,0,0.486634870302636,0.283604451492204,0,0.263504357079378,0.261958150995425,0,0,0.649094787309367,0.522389211897802,0.797747763113191,0,0,0,0.39752481473341,0,0,0.56530794192401,0,0.275118041940067,0,0.258416759169329,0,0.33472061276467,0,0.760272105718513,0.488124115096339,0,0.81014194788176,0.0892997282840798,0.898117490504679,0.112611480483322,0,0,0.183201743930407,0,0,0,0.496971951695318,0.379891534993739,0,0.286836620748814,0,0.560677600142307,0,0.24666754841716,0.311211035399766,0,0.163461903113459,0.151357427644931,0,0,0.312160076830321,0,0,0,0,0,0.204154171254893,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.300091096084402,0,0,0.18611685633159,0.168776332241266,0.0974370051611986,0.252433774244115,0,0,0.355009592516614,0.10075209822764,0,0,0.272746120590835,0,0,0,0.116193942869518,0.10366105501537,0,0,0,0,0,0,0,0.236613600079688,0.674338760312407,0.241011029883482,0.220587945464788,0.217879444092406,0.474541238222193,0.404493924480493,0.196221465125346,0.769494313892781,0,0,0,0,0,0,0,0,0.737930631258681,0,0,1.1240175325762,0,0,0,0,0,0,0.117408694235822,0.144366447761074,0,0.380508304469197,0,0,0.492434012174795,1.17002132569619,0.297262324577456,0,0.16798212819886,0.141775097242386,0,0,0,0,1.05658120815871,3.52457796419313,2.59415916150531,3.53478813593864,0.063497894292169,0.381988425558278,0,0,0,0,0,0,0.43596006883328,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.599837947092342,1.2162378064119,0.502257091432126,0,0,0,0,0,1.02738161275192,0.716243852959582,0,0,0,0,0,0,0.773288812777695,0,0,0,0,0,0.12269149171914,0,0,0.831883446123229,0.178428988797162,0.473107245101804,0.468565659970853,0,0,0,0,0.184369168541703,0,0.195801157462741,0,0,0,0,0,0,0.30239029332968,0,0.306923946576125,0.561320188866147,0.384417447767103,0,0.160853921143607,0,0,0.177561725313127,0.246381468041427,0,0,0.120859449591622,0.40101294060657,0,0,0,0.131124414959424,0.451199612907412,0.462092022626489,0.784349769176855,0,0.316654886678627,0,0,0,0,0.270946437543853,0.501689773854853,0.764628819135115,0,0,0,0,0.769350375349168,0.328014645699706,0.325378394664303,0.206082023295445,0,0.082509499920588,0.574265537996172,0,0,0,0,0.15350367472613,0,0.214840489736547,0,0,0,0.165284915360978,0.192190067365106,0.127612712494584,0.10115778085555,0,0,0,0,0.532306030317022,0,0,0,0,0.316379424718726,0,0,0,0,0,0,0,0,0,0,0,0,0.243713489631284,0,0,0,0,0,0,0,0,0,0,0.6196469961995,0,0,0,0,0,1.26664581178598,0.987884678879706,0,0,0.0962221127255121,0,0,0.0941438007767792,0,0,0,0,0,0,0,0,0,0,0,0,0.106824071127473,0,0.980160863924127,0.185803175125719,0,0,0,0,0.191505370132367,0,0,0,0,0,0,0,0,0,0,0,0.307240764308458,0.223676107892416,0,0.19538809540204,0,0,0,0,0,0.935702702041099,0.879049075631364,0.121360521749513,0,0,0,0,0.614321404198464,0,2.11004124615769,0.333926115068718,0,0,0,0.276283915531148,0.251932747854276,0,0,0,0.269605053441981,0.179021174675609,0,0.0986434056369336,0,0,0.969332746095218,0.927680981618513,1.99613798001194,0.7812832832557,0.174919999992391,0,0.341380344856499,0.762760950878299,0.236387681767936,0,0,0.347249989866585,0,0.241192877250816,0,0.552896299656123,0,1.09692698576986,0.653630781113941,0.697118721393016,0.153900517007594,0.341826167541004,0,0.0897576444097721,0,0,0,0,0,0,0,0,0,0,0,0,0.210998064528027,0.326465616318295,1.41353071433941,0,0,0.353830258013357,0,0,0,0,0.404406797884062,0.802577647298789,0.234264445725339,0,0.978323094660449,0,0.394584402849391,0,1.53036380815245,0.442306057399416,0,0,1.32930774541437,0,0,0,0.569219092059585,0.138674673013139,0.173559738335131,0.587954384486266,0.69647365264322,0.34945333648406,0,0.580537987734511,0.438535902517113,0.246346371159628,0.290967049465258,0,1.12990370390266,0.137041924646751,0,1.26621591911757,0,0.240476460754601,0.213452994739353,0.19980960958213,0.288180834308212,0,0,0.288109595976299,0,0.707082103850386,0.951329442515298,0.732219924186332,0.101998217636322,0.288950589901519,0.600420288709789,0.273810757783986,0,0,0,0,0,0,0,0,0,0.0671834724867263,0,0,0,0,0,0.590564889088493,0,0,0.408610218334727,0,0,0,0,0,1.64023802976667,0.670869375198532,1.02447419488958,0.577000469484979,0,0,0,0,0,0,0,0,0,1.19730191562487,0,0.340776043570843,0.339936274560377,0,0,1.80996138906171,1.19009341568421,0.855434189421647,2.11444506695002,0.320362237703084,0.157204305099666,0,0.496166021811951,0,0,0,2.72008901684737,1.2534494701135,1.53172788381731,2.29510841496863,0.785270481251171,0.886068179966986,1.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| |||
|short_description=p11@EPB41L1 | |||
}} |
Revision as of 11:01, 21 January 2014
Short description: | p11@EPB41L1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_11_at_EPB41L1_5end |
Coexpression cluster: | NA |
Association with transcript: | 15bp_to_ENST00000397307, ENST00000452261_5end |
EntrezGene: | EPB41L1 |
HGNC: | 3378 |
UniProt: | Q4VXN1Q4VXN5 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mast cell | 4.65e-13 | 5 |
basophil mast progenitor cell | 4.65e-13 | 5 |
endocrine cell | 2.96e-07 | 9 |
Ontology term | p-value | n |
---|---|---|
neocortex | 4.85e-20 | 20 |
brain grey matter | 3.48e-18 | 34 |
gray matter | 3.48e-18 | 34 |
regional part of cerebral cortex | 4.33e-18 | 22 |
cerebral hemisphere | 1.36e-16 | 32 |
regional part of nervous system | 2.77e-16 | 53 |
regional part of brain | 2.77e-16 | 53 |
cerebral cortex | 9.93e-16 | 25 |
pallium | 9.93e-16 | 25 |
telencephalon | 1.78e-15 | 34 |
neural tube | 3.27e-15 | 56 |
neural rod | 3.27e-15 | 56 |
future spinal cord | 3.27e-15 | 56 |
neural keel | 3.27e-15 | 56 |
regional part of telencephalon | 4.09e-14 | 32 |
brain | 2.69e-13 | 68 |
future brain | 2.69e-13 | 68 |
regional part of forebrain | 2.07e-12 | 41 |
forebrain | 2.07e-12 | 41 |
anterior neural tube | 2.07e-12 | 41 |
future forebrain | 2.07e-12 | 41 |
central nervous system | 6.85e-12 | 81 |
brainstem | 1.62e-10 | 6 |
neural plate | 1.81e-10 | 82 |
presumptive neural plate | 1.81e-10 | 82 |
nervous system | 2.71e-10 | 89 |
neurectoderm | 8.48e-10 | 86 |
temporal lobe | 3.63e-09 | 6 |
pre-chordal neural plate | 8.42e-09 | 61 |
locus ceruleus | 1.32e-08 | 2 |
brainstem nucleus | 1.32e-08 | 2 |
hindbrain nucleus | 1.32e-08 | 2 |
ecto-epithelium | 2.02e-08 | 104 |
adult organism | 2.22e-08 | 114 |
occipital lobe | 2.39e-07 | 5 |