FFCP PHASE1:Hg19::chr20:46415363..46415378,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=55959 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=20392 | |||
|TSSclassifier=strong | |||
|UniProt=G3XAE6,Q8IWU5 | |||
|association_with_transcript=-3bp_to_ENST00000361612,ENST00000484875,NM_001161841,NM_198596,uc002xtq.2,uc002xtr.2_5end | |||
|coexpression_cluster_id=C1870 | |||
|description=CAGE_peak_5_at_SULF2_5end | |||
|id=chr20:46415363..46415378,- | |||
|ontology_enrichment_celltype=CL:0002057!3.94e-22!42;CL:0000860!3.90e-19!45;CL:0000766!2.21e-12!76;CL:0002194!8.21e-12!63;CL:0000576!8.21e-12!63;CL:0000040!8.21e-12!63;CL:0000559!8.21e-12!63;CL:0002009!1.65e-11!65;CL:0000557!8.84e-10!71;CL:0000839!1.01e-08!70;CL:0002393!1.43e-07!9;CL:0002397!1.43e-07!9 | |||
|ontology_enrichment_celltype_v019=CL:0000860;1.20e-19;33!CL:0002057;1.20e-19;33!CL:0000576;1.64e-15;48!CL:0000473;4.85e-13;39!CL:0000234;4.85e-13;39!CL:0000766;3.55e-12;69!CL:0002393;3.44e-08;6!CL:0002397;3.44e-08;6!CL:0000094;8.26e-08;8 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,8.88e-31,42;CL:0002057,8.88e-31,42;CL:0000766,2.40e-26,72;CL:0000473,3.16e-25,48;CL:0000234,3.16e-25,48;CL:0002194,1.88e-23,59;CL:0000576,1.88e-23,59;CL:0000040,1.88e-23,59;CL:0000559,1.88e-23,59;CL:0002009,3.15e-22,61;CL:0000557,1.94e-20,67;CL:0000839,1.66e-19,66;CL:0000763,4.99e-14,108;CL:0000049,4.99e-14,108;CL:0002393,1.02e-11,9;CL:0002397,1.02e-11,9;CL:0000738,3.37e-10,136;CL:0000094,6.54e-08,8;CL:0002087,7.58e-08,115 | |||
|ontology_enrichment_development_v019=CL:0002057;1.61e-21;42 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000468!8.18e-16!659;UBERON:0000467!4.13e-14!625;UBERON:0000480!6.54e-14!626;UBERON:0002193!1.14e-10!112;UBERON:0000062!8.95e-10!511;UBERON:0000922!1.26e-09!612;UBERON:0002390!1.57e-09!102;UBERON:0003061!1.57e-09!102;UBERON:0002050!3.92e-09!605;UBERON:0005423!3.92e-09!605;UBERON:0000923!6.68e-09!604;UBERON:0005291!6.68e-09!604;UBERON:0006598!6.68e-09!604;UBERON:0002532!6.68e-09!604;UBERON:0007023!1.67e-08!115;UBERON:0002405!3.37e-08!115;UBERON:0002371!2.97e-07!80;UBERON:0004765!7.07e-07!101;UBERON:0001434!7.07e-07!101 | |||
|ontology_enrichment_uberon_v019=UBERON:0000178;5.18e-08;15!UBERON:0000179;5.18e-08;15!UBERON:0000463;5.18e-08;15 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002193,1.86e-21,108;UBERON:0002390,7.82e-21,98;UBERON:0003061,7.82e-21,98;UBERON:0002371,2.12e-17,76;UBERON:0002405,1.91e-15,93;UBERON:0001474,3.98e-15,82;UBERON:0003081,6.51e-15,203;UBERON:0004765,2.21e-13,90;UBERON:0001434,4.09e-12,100;UBERON:0000926,1.90e-10,315;UBERON:0004120,1.90e-10,315;UBERON:0006603,1.90e-10,315;UBERON:0002050,4.67e-09,564;UBERON:0005423,6.49e-09,581;UBERON:0000923,1.25e-08,560;UBERON:0010316,1.25e-08,560;UBERON:0005291,1.25e-08,560;UBERON:0006598,1.25e-08,560;UBERON:0010317,1.25e-08,560;UBERON:0002532,1.25e-08,560;UBERON:0000922,2.06e-08,592;UBERON:0000178,6.71e-08,15;UBERON:0000179,6.71e-08,15;UBERON:0000463,6.71e-08,15 | |||
|phase1_expression=0.726713517082227,0.214100523890983,0,2.00146596706261,0.446961094427288,0,0,0,0.522371256399677,0,0,0.436882744260345,0.791300934685361,0,0,0,0,0,0,0.861847406537515,0.204000691244253,1.25381888591235,0.85870796139317,0.136874425072884,0,0,0.246301768349837,0.157421562627358,4.72037132218685,2.30297638858328,5.26374819274658,0,0.6024118375565,0,0,0,0,3.32397245119126,3.60980005446255,2.38711957787437,0,0.32389366601898,0,3.63495596948912,3.77875943688809,2.42584061187816,2.55671940596253,2.05583944010913,1.23882548358041,0.863077176966451,1.0246428261164,0.236482229888585,5.17118521104928,3.87290810150296,2.70852973188684,4.89430082810772,2.45615535052061,1.12361742222542,4.89734227793444,4.17207735198922,1.91801137739712,0.329851300186716,0.997318288108159,1.27867425159808,1.45104619314292,2.26954089876456,1.24564449799115,2.26123798731069,0.521482918420201,2.38907729175628,1.81619850790011,2.57794345191295,1.26584954976354,9.29523259772544,7.01594189884644,3.56419697364239,15.0520365736303,9.4611442490149,10.125711961916,8.26536956849621,4.77400025277816,5.11459630540975,0,0,0,0.426730222566507,0.400395987036012,0,0,0,0,0,0.382273228125229,0,0.560508562981536,0.526768169550154,0,0,0.205601498999509,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.451725357233318,0.383959833463255,0,0,0,0,0,0,0,0,0.511450247374121,0.722878304769133,4.51204119572301,2.17269778441236,2.3858578411533,1.45990461090791,0.283604451492204,0.221729397462564,0,1.17881167947941,0.364295288292542,0,2.92092654289215,4.52737316978095,3.32394901297163,8.10868122638163,5.14795419702115,4.82894751728434,1.78886166630035,0,2.42998351125316,1.13061588384802,0.419499436209906,0.275118041940067,1.04497483268405,2.58416759169329,4.62496141492723,7.69857409358742,3.62546385398232,1.52054421143703,4.39311703586705,1.83831540172934,0.81014194788176,1.25019619597712,0.44905874525234,0.225222960966644,1.53316637465883,0,0.732806975721629,2.63560834872127,3.87780264148325,0.436094052142534,0,0,0,0.860509862246441,0,0,2.1349799145941,0.49333509683432,2.48968828319813,2.2900814251847,0.817309515567294,1.21085942115945,0.576175924479999,0,0,0,0,0,0,0,0,0,0,1.18800285728205,0.494533858557114,0,0,0,0,0,0.877955241761676,0.30648779579902,1.35214253015937,0.113432183160021,0.179389635688862,1.92201649936711,0.423863802319124,0,0.309157587715317,0.515281080091258,1.11670113798954,0.337552664482532,0.487185025805993,0.504867548488229,0.736399189138395,0.323292113637624,0.355009592516614,0.604512589365842,0,0.966304265816484,0.818238361772504,0.286804595389004,0.487894824518382,0,0.116193942869518,0.310983165046111,0.504641701751257,0.36497735907583,0,0.643240938192885,0,0,0,0,0,0,0,0,0.237270619111097,0.134831308160164,0,0,4.42893272774789,0,6.173610169971,2.94017422771084,0,0,0.590789906681404,0,0,0.343135620597051,1.97550513735526,2.24803506515239,0.402115889646523,1.75918045801206,0,0,0,1.27523445472584,0.234817388471643,0.721832238805369,0.925971025153221,0.951270761172991,18.1747011530633,18.8866955660872,0,0,0,0.93733833986777,1.51183915378974,0.850650583454319,0.268675568108545,0.581267877027924,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.904902010304444,0,0,0,0,0,0,0,0.57191197463259,4.88359444852299,0,0.325736184293735,0.355391948742546,0,0.301439377059586,0,0.199945982364114,0,0,0,0.239624855491583,0,0,0,0,0,0,0.591092280605782,0,0.513372145118994,1.27047312111232,3.90419561572865,0,0.670065061337395,0,0,5.9832291840805,5.38740167466846,0,0,0,0,0,0,0,0.300946099727719,0,0,0,0,0,0.195801157462741,0,3.10152039184331,2.5885704098234,2.02782359826544,0,1.66435439510497,0.30239029332968,0.496215615637554,0.460385919864187,0.280660094433074,0,3.07024349440022,0,0,0,0,0,0,0,0,0.802025881213139,0.276242966807689,0.114814448164607,0,0,0,0.308061348417659,0,0,0.422206515571503,3.4120015221269,5.10281115829547,0.863663664408557,6.16909010761157,0,0,0.509752546090077,0,0,0,0,0,0.656029291399411,0,0.412164046590889,0,0,0.574265537996172,0.650060246036521,0,0.193341436584244,0,0,0,1.07420244868274,0.290033387828457,0,2.04773681987496,0,0,0.127612712494584,0.10115778085555,0,0,0,0,0,0.869932992075073,0.18532421910392,0,0,0.316379424718726,3.43134349062885,0,0.42793898803392,0,0,1.07923474549989,1.64722217841633,0.471249609382746,0,0,0,0,0,0,0,0.282810863907425,0,0,0,0,0,0,0,0,0,0.143411352204052,0,0,0,0.633322905892992,1.64647446479951,0,0,0,0.670302275535787,0,0.0941438007767792,1.72202149068492,0,1.33029046061003,0.229723400206959,1.01489521846434,1.52927441428475,1.13929437434833,1.90585420366231,2.05681136543097,1.94541993357815,1.08006287447623,3.96562588147135,0.640944426764839,0,0,0,0,0,0,0,0.383010740264733,0,0,0,0,0,0,0,0.1605880751037,0,0,0,0,0,0,0,0,0,0,0,1.4098700508785,0.561421621224659,1.17206543417515,0.121360521749513,0,0,0.47748896947538,2.37571744666111,0.614321404198464,0,0.281338832821026,0,0,0.211125408127993,1.59398390600856,0.552567831062295,0.503865495708552,0.409074730008619,0,0,0.449341755736634,0.358042349351218,0,1.18372086764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| |||
|short_description=p5@SULF2 | |||
}} |
Revision as of 11:49, 21 January 2014
Short description: | p5@SULF2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_SULF2_5end |
Coexpression cluster: | C1870_MCF7_breast_lung_Endothelial_CD14_Dendritic_Hepatic |
Association with transcript: | -3bp_to_ENST00000361612, ENST00000484875, NM_001161841, NM_198596, uc002xtq.2, uc002xtr.2_5end |
EntrezGene: | SULF2 |
HGNC: | 20392 |
UniProt: | G3XAE6Q8IWU5 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
classical monocyte | 8.88e-31 | 42 |
CD14-positive, CD16-negative classical monocyte | 8.88e-31 | 42 |
myeloid leukocyte | 2.40e-26 | 72 |
defensive cell | 3.16e-25 | 48 |
phagocyte | 3.16e-25 | 48 |
monopoietic cell | 1.88e-23 | 59 |
monocyte | 1.88e-23 | 59 |
monoblast | 1.88e-23 | 59 |
promonocyte | 1.88e-23 | 59 |
macrophage dendritic cell progenitor | 3.15e-22 | 61 |
granulocyte monocyte progenitor cell | 1.94e-20 | 67 |
myeloid lineage restricted progenitor cell | 1.66e-19 | 66 |
myeloid cell | 4.99e-14 | 108 |
common myeloid progenitor | 4.99e-14 | 108 |
intermediate monocyte | 1.02e-11 | 9 |
CD14-positive, CD16-positive monocyte | 1.02e-11 | 9 |
leukocyte | 3.37e-10 | 136 |
granulocyte | 6.54e-08 | 8 |
nongranular leukocyte | 7.58e-08 | 115 |
Ontology term | p-value | n |
---|---|---|
hemolymphoid system | 1.86e-21 | 108 |
hematopoietic system | 7.82e-21 | 98 |
blood island | 7.82e-21 | 98 |
bone marrow | 2.12e-17 | 76 |
immune system | 1.91e-15 | 93 |
bone element | 3.98e-15 | 82 |
lateral plate mesoderm | 6.51e-15 | 203 |
skeletal element | 2.21e-13 | 90 |
skeletal system | 4.09e-12 | 100 |
mesoderm | 1.90e-10 | 315 |
mesoderm-derived structure | 1.90e-10 | 315 |
presumptive mesoderm | 1.90e-10 | 315 |
embryonic structure | 4.67e-09 | 564 |
developing anatomical structure | 6.49e-09 | 581 |
germ layer | 1.25e-08 | 560 |
germ layer / neural crest | 1.25e-08 | 560 |
embryonic tissue | 1.25e-08 | 560 |
presumptive structure | 1.25e-08 | 560 |
germ layer / neural crest derived structure | 1.25e-08 | 560 |
epiblast (generic) | 1.25e-08 | 560 |
embryo | 2.06e-08 | 592 |
blood | 6.71e-08 | 15 |
haemolymphatic fluid | 6.71e-08 | 15 |
organism substance | 6.71e-08 | 15 |