FFCP PHASE1:Mm9::chr11:61668584..61668599,-: Difference between revisions
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{{FFCP|EntrezGene=29869|HGNC=|UniProt=Q3UG39,Q5SUB4,Q9QY01|association_with_transcript=0bp_to_NM_013881,uc007jih.2_5end|description=CAGE_peak_1_at_Ulk2_5end|id=chr11:61668584..61668599,-|ontology_enrichment_celltype=CL:0000117!6.06e-10!23;CL:0000337!6.06e-10!23;CL:0000393!5.39e-09!39;CL:0000211!5.39e-09!39;CL:0000540!8.00e-09!33;CL:0000047!8.00e-09!33;CL:0000031!8.00e-09!33;CL:0000404!8.00e-09!33;CL:0000055!1.24e-07!50;CL:0000221!6.27e-07!44;CL:0000133!6.27e-07!44;CL:0002319!7.89e-07!43|ontology_enrichment_celltype_v019_2=CL:0000117,6.06e-10,23;CL:0000337,6.06e-10,23;CL:0000393,5.39e-09,39;CL:0000211,5.39e-09,39;CL:0000540,8.00e-09,33;CL:0000047,8.00e-09,33;CL:0000031,8.00e-09,33;CL:0000404,8.00e-09,33;CL:0000221,6.27e-07,44;CL:0000133,6.27e-07,44;CL:0002319,7.89e-07,43|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0004111!1.52e-17!122;UBERON:0000025!2.61e-16!114;UBERON:0001017!2.52e-12!73;UBERON:0005743!2.52e-12!73;UBERON:0000033!7.92e-12!63;UBERON:0004121!1.27e-11!102;UBERON:0000924!1.27e-11!102;UBERON:0006601!1.27e-11!102;UBERON:0000073!1.29e-11!75;UBERON:0001016!1.29e-11!75;UBERON:0002020!4.08e-11!34;UBERON:0001049!5.60e-11!52;UBERON:0005068!5.60e-11!52;UBERON:0006241!5.60e-11!52;UBERON:0007135!5.60e-11!52;UBERON:0002346!4.96e-10!71;UBERON:0003075!4.96e-10!71;UBERON:0007284!4.96e-10!71;UBERON:0003056!1.10e-09!49;UBERON:0000955!3.17e-09!50;UBERON:0006238!3.17e-09!50;UBERON:0002791!5.19e-09!29;UBERON:0003528!5.19e-09!29;UBERON:0001893!5.19e-09!29;UBERON:0002616!8.28e-09!49;UBERON:0000477!4.15e-08!154;UBERON:0003080!4.98e-08!40;UBERON:0002780!1.25e-07!39;UBERON:0001890!1.25e-07!39;UBERON:0006240!1.25e-07!39;UBERON:0000483!3.14e-07!181;UBERON:0000119!6.11e-07!183|ontology_enrichment_uberon_v019_2=UBERON:0004111,1.52e-17,122;UBERON:0000025,2.61e-16,114;UBERON:0004121,1.78e-13,95;UBERON:0000924,1.78e-13,95;UBERON:0006601,1.78e-13,95;UBERON:0001017,2.51e-12,73;UBERON:0002346,3.02e-12,64;UBERON:0003075,3.02e-12,64;UBERON:0007284,3.02e-12,64;UBERON:0010314,3.52e-12,92;UBERON:0010371,1.17e-11,73;UBERON:0001016,1.29e-11,75;UBERON:0002020,4.08e-11,34;UBERON:0001049,5.60e-11,52;UBERON:0005068,5.60e-11,52;UBERON:0006241,5.60e-11,52;UBERON:0007135,5.60e-11,52;UBERON:0000073,9.12e-11,54;UBERON:0003056,1.10e-09,49;UBERON:0000955,3.53e-09,47;UBERON:0006238,3.53e-09,47;UBERON:0003528,5.19e-09,29;UBERON:0002791,5.19e-09,29;UBERON:0001893,5.19e-09,29;UBERON:0002616,9.31e-09,46;UBERON:0000483,3.64e-08,174;UBERON:0003080,4.98e-08,40;UBERON:0000119,7.58e-08,176;UBERON:0002780,1.25e-07,39;UBERON:0001890,1.25e-07,39;UBERON:0006240,1.25e-07,39|phase1_expression=18.2569685699465,11.8651638597383,17.2899710968024,10.2837831844322,11.520601788766,7.89032577985882,3.50418960893289,14.332688902015,11.9670413828917,7.95819389494778,1.88339765048055,2.07407613387875,11.2992481754596,12.8507991555926,5.3297561890506,3.44207954562704,0.699561878128147,9.14840279538889,8.91243818437302,8.91218268775863,16.4983982893075,9.13476751048145,6.52999472847338,4.31979541542198,6.42345986988076,10.9104073181854,7.32295393470427,6.46413698057667,3.04037471130198,4.53654233567875,4.21287970245079,3.81018404075779,6.76571266343027,0,5.48818077527422,1.99481574430191,4.28755648150975,14.6486070757918,7.813353445238,12.5645698553712,20.5881020810855,12.9778642142105,16.0218416500281,13.2191658874356,13.787262645854,13.5824596599644,12.5182615095686,8.50298109883741,10.9843091367236,12.4435135407541,6.99932108126813,8.62515386189829,11.9125650300993,9.42970784614748,6.04968838456435,9.00408026125814,20.6304076755905,17.0171790451556,28.3243045203437,19.0436752537932,22.8179305262225,7.11573517345177,10.6715375533337,18.4479442042687,15.8218618010716,12.0781619540837,15.579205746957,20.7477884873639,31.8327109787026,26.3261579746797,27.3422449756797,17.9960120174396,17.0068776532742,22.4158162563366,22.9070675733585,22.9804696652505,7.70811166995721,19.9192247412893,15.8214729253931,30.3338461779446,28.0867065859398,30.2129754922921,16.1926139420801,15.757353080887,16.5022107598955,22.6864010814724,22.2099822046601,31.1287074528252,6.05809546665472,11.4868771362314,17.6817338108023,26.673140186423,16.319312008986,20.5087212822371,29.2399387851451,38.0822854032735,20.0835520788405,10.7371103224176,7.27400812888033,4.24007489412408,14.7885590765515,11.5493829672886,0,0,3.030874574157,4.05375784760158,3.53867111510348,17.127581957859,7.25026074212081,14.2504453502232,6.93941307064543,4.87144765299426,8.30215790121811,5.87818298155228,9.99504010653491,14.9543243682314,15.5732829672656,16.1951279750301,11.4999371753484,17.6325866442676,24.7342500675641,13.091631834651,5.59175283654366,17.8596286177044,23.8769245767339,5.8755122697976,6.70964697233154,5.39912457894067,6.09937089950711,20.8208988772704,16.9275223042892,35.4345272958278,19.9897968221118,19.9458056717658,13.5062228963714,19.1444690419954,15.3777439413978,12.5651040316194,11.1198013710817,16.2040229032585,8.58794923553845,16.5529515192101,15.3052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| {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=entrezgene:29869 | |||
|HGNC= | |||
|TSSclassifier=NA | |||
|UniProt=uniprot:Q3UG39,uniprot:Q5SUB4,uniprot:Q9QY01 | |||
|association_with_transcript=0bp_to_NM_013881,uc007jih.2_5end | |||
|cluster_id=chr11:61668584..61668599,- | |||
|description=CAGE_peak_1_at_Ulk2_5end | |||
|id=chr11:61668584..61668599,- | |||
|ontology_enrichment_celltype=CL:0000117!6.06e-10!23;CL:0000337!6.06e-10!23;CL:0000393!5.39e-09!39;CL:0000211!5.39e-09!39;CL:0000540!8.00e-09!33;CL:0000047!8.00e-09!33;CL:0000031!8.00e-09!33;CL:0000404!8.00e-09!33;CL:0000055!1.24e-07!50;CL:0000221!6.27e-07!44;CL:0000133!6.27e-07!44;CL:0002319!7.89e-07!43 | |||
|ontology_enrichment_celltype_v019_2=CL:0000117,6.06e-10,23;CL:0000337,6.06e-10,23;CL:0000393,5.39e-09,39;CL:0000211,5.39e-09,39;CL:0000540,8.00e-09,33;CL:0000047,8.00e-09,33;CL:0000031,8.00e-09,33;CL:0000404,8.00e-09,33;CL:0000221,6.27e-07,44;CL:0000133,6.27e-07,44;CL:0002319,7.89e-07,43 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004111!1.52e-17!122;UBERON:0000025!2.61e-16!114;UBERON:0001017!2.52e-12!73;UBERON:0005743!2.52e-12!73;UBERON:0000033!7.92e-12!63;UBERON:0004121!1.27e-11!102;UBERON:0000924!1.27e-11!102;UBERON:0006601!1.27e-11!102;UBERON:0000073!1.29e-11!75;UBERON:0001016!1.29e-11!75;UBERON:0002020!4.08e-11!34;UBERON:0001049!5.60e-11!52;UBERON:0005068!5.60e-11!52;UBERON:0006241!5.60e-11!52;UBERON:0007135!5.60e-11!52;UBERON:0002346!4.96e-10!71;UBERON:0003075!4.96e-10!71;UBERON:0007284!4.96e-10!71;UBERON:0003056!1.10e-09!49;UBERON:0000955!3.17e-09!50;UBERON:0006238!3.17e-09!50;UBERON:0002791!5.19e-09!29;UBERON:0003528!5.19e-09!29;UBERON:0001893!5.19e-09!29;UBERON:0002616!8.28e-09!49;UBERON:0000477!4.15e-08!154;UBERON:0003080!4.98e-08!40;UBERON:0002780!1.25e-07!39;UBERON:0001890!1.25e-07!39;UBERON:0006240!1.25e-07!39;UBERON:0000483!3.14e-07!181;UBERON:0000119!6.11e-07!183 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004111,1.52e-17,122;UBERON:0000025,2.61e-16,114;UBERON:0004121,1.78e-13,95;UBERON:0000924,1.78e-13,95;UBERON:0006601,1.78e-13,95;UBERON:0001017,2.51e-12,73;UBERON:0002346,3.02e-12,64;UBERON:0003075,3.02e-12,64;UBERON:0007284,3.02e-12,64;UBERON:0010314,3.52e-12,92;UBERON:0010371,1.17e-11,73;UBERON:0001016,1.29e-11,75;UBERON:0002020,4.08e-11,34;UBERON:0001049,5.60e-11,52;UBERON:0005068,5.60e-11,52;UBERON:0006241,5.60e-11,52;UBERON:0007135,5.60e-11,52;UBERON:0000073,9.12e-11,54;UBERON:0003056,1.10e-09,49;UBERON:0000955,3.53e-09,47;UBERON:0006238,3.53e-09,47;UBERON:0003528,5.19e-09,29;UBERON:0002791,5.19e-09,29;UBERON:0001893,5.19e-09,29;UBERON:0002616,9.31e-09,46;UBERON:0000483,3.64e-08,174;UBERON:0003080,4.98e-08,40;UBERON:0000119,7.58e-08,176;UBERON:0002780,1.25e-07,39;UBERON:0001890,1.25e-07,39;UBERON:0006240,1.25e-07,39 | |||
|phase1_expression=18.2569685699465,11.8651638597383,17.2899710968024,10.2837831844322,11.520601788766,7.89032577985882,3.50418960893289,14.332688902015,11.9670413828917,7.95819389494778,1.88339765048055,2.07407613387875,11.2992481754596,12.8507991555926,5.3297561890506,3.44207954562704,0.699561878128147,9.14840279538889,8.91243818437302,8.91218268775863,16.4983982893075,9.13476751048145,6.52999472847338,4.31979541542198,6.42345986988076,10.9104073181854,7.32295393470427,6.46413698057667,3.04037471130198,4.53654233567875,4.21287970245079,3.81018404075779,6.76571266343027,0,5.48818077527422,1.99481574430191,4.28755648150975,14.6486070757918,7.813353445238,12.5645698553712,20.5881020810855,12.9778642142105,16.0218416500281,13.2191658874356,13.787262645854,13.5824596599644,12.5182615095686,8.50298109883741,10.9843091367236,12.4435135407541,6.99932108126813,8.62515386189829,11.9125650300993,9.42970784614748,6.04968838456435,9.00408026125814,20.6304076755905,17.0171790451556,28.3243045203437,19.0436752537932,22.8179305262225,7.11573517345177,10.6715375533337,18.4479442042687,15.8218618010716,12.0781619540837,15.579205746957,20.7477884873639,31.8327109787026,26.3261579746797,27.3422449756797,17.9960120174396,17.0068776532742,22.4158162563366,22.9070675733585,22.9804696652505,7.70811166995721,19.9192247412893,15.8214729253931,30.3338461779446,28.0867065859398,30.2129754922921,16.1926139420801,15.757353080887,16.5022107598955,22.6864010814724,22.2099822046601,31.1287074528252,6.05809546665472,11.4868771362314,17.6817338108023,26.673140186423,16.319312008986,20.5087212822371,29.2399387851451,38.0822854032735,20.0835520788405,10.7371103224176,7.27400812888033,4.24007489412408,14.7885590765515,11.5493829672886,0,0,3.030874574157,4.05375784760158,3.53867111510348,17.127581957859,7.25026074212081,14.2504453502232,6.93941307064543,4.87144765299426,8.30215790121811,5.87818298155228,9.99504010653491,14.9543243682314,15.5732829672656,16.1951279750301,11.4999371753484,17.6325866442676,24.7342500675641,13.091631834651,5.59175283654366,17.8596286177044,23.8769245767339,5.8755122697976,6.70964697233154,5.39912457894067,6.09937089950711,20.8208988772704,16.9275223042892,35.4345272958278,19.9897968221118,19.9458056717658,13.5062228963714,19.1444690419954,15.3777439413978,12.5651040316194,11.1198013710817,16.2040229032585,8.58794923553845,16.5529515192101,15.3052810334547,16.2761203262572,22.1798987233329,16.2704424761759,30.6404639310313,15.5222022443409,8.191583731448,11.7245769704048,19.1786725338704,10.9597866213787,8.61946472599353,10.447564995665,10.2891068203972,7.36426787228425,0.702213187313235,2.05878325691772,3.12579849335152,7.87077935634907,8.44293815931946,9.54328925743379,10.4167683657493,12.3961466000864,8.4846912088058,9.99895962426754,12.3405764643825,18.3321587516456,18.4307031903098,18.5509234409378,28.7794273887788,27.7779976108131,18.4422096844483,23.6203297018254,21.449574753541,32.929475961371,4.62586296177317,4.49565963328025,7.03851226766272,6.0381534683714,5.7990357594942,8.26902450955704,7.78323153457046,7.03834816616469,6.64340686162316,6.58795818896044,6.28338022000674,7.95825888164603,6.82374304916921,8.98819408654222,4.53889904736858,6.37252074413975,5.12103332573321,7.65465034485183,4.50830942692322,6.51684249105006,8.72786192254316,10.8710520829994,14.2282208529579,9.59465961867414,9.26292494264111,10.488758933353,32.6097889795864,3.33690211432188,4.71741588271687,4.27238013531222,4.26006254915856,6.02942899381042,7.89340140522401,10.0693648107784,9.89024883327716,14.2771934857802,20.1275489138296,16.3742016974142,25.587089195394,35.6136217905428,29.9593680581593,26.5343936749852,19.3990849674935,8.52711352967181,7.82231886921724,7.29903868833309,8.68353918667458,14.2380318825543,22.3761022432853,32.5873191922524,16.2364198429377,15.0595988961167,26.3100368284854,15.8947415274266,17.2684981865896,21.2634116114822,10.5553898757491,6.52686820582452,14.2611639175521,10.2096596132751,16.0550589987792,17.8161763620149,10.8197063948606,45.4447668967871,11.6738041184015,9.76096860741596,12.0637102730367,11.2315335037699,12.9223230967789,13.3045969470751,14.9779959619711,13.4437694639203,13.8350722281283,22.1711708331047,15.0456490320765,10.6839362200353,15.1484872198826,18.1467135269789,7.96470830039777,4.37005145078967,6.65111825322452,4.52652191414155,4.13422650033082,9.22305443831782,12.4045580720746,13.4507479906677,9.9819265947722,12.009396801561,14.7586052004998,10.3135543248187,10.8940673841212,9.54323798365944,7.50280365939976,9.43082954139006,13.6551979904551,11.5939731441346,16.7840001014163,11.5696680663548,9.62154003061212,12.7099242518292,14.3343458735725,8.73897140589844,11.948367575497,12.8466530096972,11.2210003362948,10.0125948844487,5.53813589596716,16.6882771809459,7.00570611271196,7.42992724667601,7.03739204004904,4.89757988212197,5.33107488111998,9.15112692826091,7.30907248973578,7.41742697315387,7.73919853304773,6.68269432610579,8.54107182669065,12.6058069618646,7.99239522081329,6.6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| |||
|short_description=p1@Ulk2 | |||
}} |
Revision as of 06:16, 6 August 2015
Short description: | p1@Ulk2 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Ulk2_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_NM_013881, uc007jih.2_5end |
EntrezGene: | 29869 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 6.06e-10 | 23 |
neuroblast (sensu Vertebrata) | 6.06e-10 | 23 |
electrically responsive cell | 5.39e-09 | 39 |
electrically active cell | 5.39e-09 | 39 |
neuron | 8.00e-09 | 33 |
neuronal stem cell | 8.00e-09 | 33 |
neuroblast | 8.00e-09 | 33 |
electrically signaling cell | 8.00e-09 | 33 |
ectodermal cell | 6.27e-07 | 44 |
neurectodermal cell | 6.27e-07 | 44 |
neural cell | 7.89e-07 | 43 |
Ontology term | p-value | n |
---|---|---|
anatomical conduit | 1.52e-17 | 122 |
tube | 2.61e-16 | 114 |
ectoderm-derived structure | 1.78e-13 | 95 |
ectoderm | 1.78e-13 | 95 |
presumptive ectoderm | 1.78e-13 | 95 |
central nervous system | 2.51e-12 | 73 |
neurectoderm | 3.02e-12 | 64 |
neural plate | 3.02e-12 | 64 |
presumptive neural plate | 3.02e-12 | 64 |
structure with developmental contribution from neural crest | 3.52e-12 | 92 |
ecto-epithelium | 1.17e-11 | 73 |
nervous system | 1.29e-11 | 75 |
gray matter | 4.08e-11 | 34 |
neural tube | 5.60e-11 | 52 |
neural rod | 5.60e-11 | 52 |
future spinal cord | 5.60e-11 | 52 |
neural keel | 5.60e-11 | 52 |
regional part of nervous system | 9.12e-11 | 54 |
pre-chordal neural plate | 1.10e-09 | 49 |
brain | 3.53e-09 | 47 |
future brain | 3.53e-09 | 47 |
brain grey matter | 5.19e-09 | 29 |
regional part of telencephalon | 5.19e-09 | 29 |
telencephalon | 5.19e-09 | 29 |
regional part of brain | 9.31e-09 | 46 |
epithelium | 3.64e-08 | 174 |
anterior neural tube | 4.98e-08 | 40 |
cell layer | 7.58e-08 | 176 |
regional part of forebrain | 1.25e-07 | 39 |
forebrain | 1.25e-07 | 39 |
future forebrain | 1.25e-07 | 39 |