FFCP PHASE1:Mm9::chr15:44579990..44580029,-: Difference between revisions
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{{FFCP|EntrezGene=319613|HGNC=|MCL_coexpression_id=13|UniProt=Q8BHS8|association_with_transcript=188bp_to_uc007vqd.1_5end|description=CAGE_peak_2_at_Sybu_5end|id=chr15:44579990..44580029,-|ontology_enrichment_celltype=CL:0000117!1.49e-14!23;CL:0000337!1.49e-14!23;CL:0000540!1.05e-08!33;CL:0000047!1.05e-08!33;CL:0000031!1.05e-08!33;CL:0000404!1.05e-08!33;CL:0000221!2.23e-07!44;CL:0000133!2.23e-07!44;CL:0002319!2.50e-07!43|ontology_enrichment_celltype_v019_2=CL:0000117,1.96e-17,23;CL:0000337,1.96e-17,23;CL:0000540,7.63e-10,33;CL:0000047,7.63e-10,33;CL:0000031,7.63e-10,33;CL:0000404,7.63e-10,33;CL:0000393,2.62e-07,39;CL:0000211,2.62e-07,39|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000033!4.48e-21!63;UBERON:0001049!4.85e-21!52;UBERON:0005068!4.85e-21!52;UBERON:0006241!4.85e-21!52;UBERON:0007135!4.85e-21!52;UBERON:0004121!8.24e-20!102;UBERON:0000924!8.24e-20!102;UBERON:0006601!8.24e-20!102;UBERON:0001017!9.07e-20!73;UBERON:0005743!9.07e-20!73;UBERON:0000073!1.38e-19!75;UBERON:0001016!1.38e-19!75;UBERON:0000955!1.74e-19!50;UBERON:0006238!1.74e-19!50;UBERON:0002020!1.92e-19!34;UBERON:0002616!8.76e-19!49;UBERON:0002346!7.97e-18!71;UBERON:0003075!7.97e-18!71;UBERON:0007284!7.97e-18!71;UBERON:0003056!1.51e-16!49;UBERON:0002791!5.37e-16!29;UBERON:0003528!5.37e-16!29;UBERON:0001893!5.37e-16!29;UBERON:0003080!7.05e-16!40;UBERON:0002780!3.08e-15!39;UBERON:0001890!3.08e-15!39;UBERON:0006240!3.08e-15!39;UBERON:0000956!9.90e-12!21;UBERON:0001869!9.90e-12!21;UBERON:0000203!9.90e-12!21;UBERON:0004111!1.03e-10!122;UBERON:0000025!3.42e-10!114;UBERON:0002619!2.71e-09!17;UBERON:0000468!3.77e-08!333;UBERON:0007811!7.19e-08!86;UBERON:0002021!3.06e-07!10;UBERON:0000411!3.06e-07!10;UBERON:0001950!3.06e-07!10|ontology_enrichment_uberon_v019_2=UBERON:0000073,5.87e-26,54;UBERON:0010371,4.25e-25,73;UBERON:0001049,1.75e-24,52;UBERON:0005068,1.75e-24,52;UBERON:0006241,1.75e-24,52;UBERON:0007135,1.75e-24,52;UBERON:0004121,1.78e-23,95;UBERON:0000924,1.78e-23,95;UBERON:0006601,1.78e-23,95;UBERON:0002346,7.34e-23,64;UBERON:0003075,7.34e-23,64;UBERON:0007284,7.34e-23,64;UBERON:0002020,8.45e-23,34;UBERON:0001017,2.98e-21,73;UBERON:0000955,1.45e-20,47;UBERON:0006238,1.45e-20,47;UBERON:0001016,4.96e-20,75;UBERON:0002616,9.82e-20,46;UBERON:0003056,5.65e-19,49;UBERON:0003528,1.32e-18,29;UBERON:0002791,1.32e-18,29;UBERON:0001893,1.32e-18,29;UBERON:0003080,2.05e-18,40;UBERON:0002780,1.22e-17,39;UBERON:0001890,1.22e-17,39;UBERON:0006240,1.22e-17,39;UBERON:0000956,2.09e-13,21;UBERON:0001869,2.09e-13,21;UBERON:0000203,2.09e-13,21;UBERON:0010314,4.33e-13,92;UBERON:0002619,1.89e-10,17;UBERON:0004111,1.14e-09,122;UBERON:0000025,3.19e-09,114;UBERON:0002021,1.67e-08,10;UBERON:0000411,1.67e-08,10;UBERON:0001950,1.67e-08,10|phase1_expression=3.52327463630547,0,0,0,0,0.503637815735669,0.934450562382103,0,0,0,0.171217968225505,0,0,0,0,0,0,0,0,0,3.14660173558958,0,0,0.159992422793407,0.22940928106717,0,0,0.430942465371778,0.190023419456374,1.00812051903972,0,0,0,0,0,0.166234645358492,0,0,0,0,0,0,0,0.629484089877886,1.11514624341466,0.917733760808408,0,0.65407546914134,1.31811709640683,0.58328969722285,0.419959264876088,1.43752564364972,0,0,0,0,0,0,11.3297218081375,11.1088105647127,12.0427966666174,0,0,0,0,0,0.599200221036809,0.768436610643109,10.9910989046986,13.9056116481641,18.718921560273,20.2812198926701,21.6451170132581,9.55428233876641,6.80502844229478,16.5459381589804,9.91042928994498,8.55505165170758,9.83081812839958,5.40733779693795,5.94669683415663,8.85552729946492,8.65467296904281,10.1297269805702,12.5294563176984,22.9810296669461,18.2235751422852,8.01517617048792,0.681535739998656,0.906858721281426,0.869593466105033,0,1.3599426674155,1.07940638327563,0,0.448026887097336,0.983110940922263,0,0,0,1.12674735821344,0,0,0,0.216491041011214,0,0,1.25602267690966,0.517875767294343,0.445326417194474,0.173485326766136,0,0.230615497256059,0.150722640552623,0.470354828542819,0.753999547978053,0,3.18118585223806,0.884610551949874,0.970601099684455,0.883366073841574,0,1.86391761218122,18.4451902117275,24.0863712835473,0.255457055208591,0,0,0.127070227073065,12.4326230706003,10.0650132620098,10.8062742817063,9.38651329038293,9.97290283588289,8.93488591606108,7.46309810111685,0.101839363850316,0.746441823660558,0,1.47309299120532,0.390361328888111,1.60931473103431,1.0803727788321,2.86339153887859,2.58538696775046,3.33095672740609,1.78033276663485,3.3631438196072,0,0,0,0,0,3.1342694986995,5.14455341019859,0.398068533636986,0,0,0,0,0,0,0,0,0,0.697601834251224,0.268273401399619,0.467061369468678,0.329119699826961,0.492502392237286,1.05389452409612,1.60819986167866,1.75640092232841,1.47627060636409,10.5144974282064,9.57012895127345,0.660837565967596,0.264450566663544,0,0,0.257734922644187,0.403367049246685,0.444756087689741,1.14135375667535,0.474529061544512,0.329397909448022,0.502670417600539,0.994782360205754,0.38992817423824,0.898819408654221,0.216138049874694,0.398282546508734,0,0,0,0.203651327845314,0.387904974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| {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=entrezgene:319613 | |||
|HGNC= | |||
|MCL_coexpression_id=13 | |||
|TSSclassifier=NA | |||
|UniProt=uniprot:Q8BHS8 | |||
|association_with_transcript=188bp_to_uc007vqd.1_5end | |||
|cluster_id=chr15:44579990..44580029,- | |||
|description=CAGE_peak_2_at_Sybu_5end | |||
|id=chr15:44579990..44580029,- | |||
|ontology_enrichment_celltype=CL:0000117!1.49e-14!23;CL:0000337!1.49e-14!23;CL:0000540!1.05e-08!33;CL:0000047!1.05e-08!33;CL:0000031!1.05e-08!33;CL:0000404!1.05e-08!33;CL:0000221!2.23e-07!44;CL:0000133!2.23e-07!44;CL:0002319!2.50e-07!43 | |||
|ontology_enrichment_celltype_v019_2=CL:0000117,1.96e-17,23;CL:0000337,1.96e-17,23;CL:0000540,7.63e-10,33;CL:0000047,7.63e-10,33;CL:0000031,7.63e-10,33;CL:0000404,7.63e-10,33;CL:0000393,2.62e-07,39;CL:0000211,2.62e-07,39 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000033!4.48e-21!63;UBERON:0001049!4.85e-21!52;UBERON:0005068!4.85e-21!52;UBERON:0006241!4.85e-21!52;UBERON:0007135!4.85e-21!52;UBERON:0004121!8.24e-20!102;UBERON:0000924!8.24e-20!102;UBERON:0006601!8.24e-20!102;UBERON:0001017!9.07e-20!73;UBERON:0005743!9.07e-20!73;UBERON:0000073!1.38e-19!75;UBERON:0001016!1.38e-19!75;UBERON:0000955!1.74e-19!50;UBERON:0006238!1.74e-19!50;UBERON:0002020!1.92e-19!34;UBERON:0002616!8.76e-19!49;UBERON:0002346!7.97e-18!71;UBERON:0003075!7.97e-18!71;UBERON:0007284!7.97e-18!71;UBERON:0003056!1.51e-16!49;UBERON:0002791!5.37e-16!29;UBERON:0003528!5.37e-16!29;UBERON:0001893!5.37e-16!29;UBERON:0003080!7.05e-16!40;UBERON:0002780!3.08e-15!39;UBERON:0001890!3.08e-15!39;UBERON:0006240!3.08e-15!39;UBERON:0000956!9.90e-12!21;UBERON:0001869!9.90e-12!21;UBERON:0000203!9.90e-12!21;UBERON:0004111!1.03e-10!122;UBERON:0000025!3.42e-10!114;UBERON:0002619!2.71e-09!17;UBERON:0000468!3.77e-08!333;UBERON:0007811!7.19e-08!86;UBERON:0002021!3.06e-07!10;UBERON:0000411!3.06e-07!10;UBERON:0001950!3.06e-07!10 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000073,5.87e-26,54;UBERON:0010371,4.25e-25,73;UBERON:0001049,1.75e-24,52;UBERON:0005068,1.75e-24,52;UBERON:0006241,1.75e-24,52;UBERON:0007135,1.75e-24,52;UBERON:0004121,1.78e-23,95;UBERON:0000924,1.78e-23,95;UBERON:0006601,1.78e-23,95;UBERON:0002346,7.34e-23,64;UBERON:0003075,7.34e-23,64;UBERON:0007284,7.34e-23,64;UBERON:0002020,8.45e-23,34;UBERON:0001017,2.98e-21,73;UBERON:0000955,1.45e-20,47;UBERON:0006238,1.45e-20,47;UBERON:0001016,4.96e-20,75;UBERON:0002616,9.82e-20,46;UBERON:0003056,5.65e-19,49;UBERON:0003528,1.32e-18,29;UBERON:0002791,1.32e-18,29;UBERON:0001893,1.32e-18,29;UBERON:0003080,2.05e-18,40;UBERON:0002780,1.22e-17,39;UBERON:0001890,1.22e-17,39;UBERON:0006240,1.22e-17,39;UBERON:0000956,2.09e-13,21;UBERON:0001869,2.09e-13,21;UBERON:0000203,2.09e-13,21;UBERON:0010314,4.33e-13,92;UBERON:0002619,1.89e-10,17;UBERON:0004111,1.14e-09,122;UBERON:0000025,3.19e-09,114;UBERON:0002021,1.67e-08,10;UBERON:0000411,1.67e-08,10;UBERON:0001950,1.67e-08,10 | |||
|phase1_expression=3.52327463630547,0,0,0,0,0.503637815735669,0.934450562382103,0,0,0,0.171217968225505,0,0,0,0,0,0,0,0,0,3.14660173558958,0,0,0.159992422793407,0.22940928106717,0,0,0.430942465371778,0.190023419456374,1.00812051903972,0,0,0,0,0,0.166234645358492,0,0,0,0,0,0,0,0.629484089877886,1.11514624341466,0.917733760808408,0,0.65407546914134,1.31811709640683,0.58328969722285,0.419959264876088,1.43752564364972,0,0,0,0,0,0,11.3297218081375,11.1088105647127,12.0427966666174,0,0,0,0,0,0.599200221036809,0.768436610643109,10.9910989046986,13.9056116481641,18.718921560273,20.2812198926701,21.6451170132581,9.55428233876641,6.80502844229478,16.5459381589804,9.91042928994498,8.55505165170758,9.83081812839958,5.40733779693795,5.94669683415663,8.85552729946492,8.65467296904281,10.1297269805702,12.5294563176984,22.9810296669461,18.2235751422852,8.01517617048792,0.681535739998656,0.906858721281426,0.869593466105033,0,1.3599426674155,1.07940638327563,0,0.448026887097336,0.983110940922263,0,0,0,1.12674735821344,0,0,0,0.216491041011214,0,0,1.25602267690966,0.517875767294343,0.445326417194474,0.173485326766136,0,0.230615497256059,0.150722640552623,0.470354828542819,0.753999547978053,0,3.18118585223806,0.884610551949874,0.970601099684455,0.883366073841574,0,1.86391761218122,18.4451902117275,24.0863712835473,0.255457055208591,0,0,0.127070227073065,12.4326230706003,10.0650132620098,10.8062742817063,9.38651329038293,9.97290283588289,8.93488591606108,7.46309810111685,0.101839363850316,0.746441823660558,0,1.47309299120532,0.390361328888111,1.60931473103431,1.0803727788321,2.86339153887859,2.58538696775046,3.33095672740609,1.78033276663485,3.3631438196072,0,0,0,0,0,3.1342694986995,5.14455341019859,0.398068533636986,0,0,0,0,0,0,0,0,0,0.697601834251224,0.268273401399619,0.467061369468678,0.329119699826961,0.492502392237286,1.05389452409612,1.60819986167866,1.75640092232841,1.47627060636409,10.5144974282064,9.57012895127345,0.660837565967596,0.264450566663544,0,0,0.257734922644187,0.403367049246685,0.444756087689741,1.14135375667535,0.474529061544512,0.329397909448022,0.502670417600539,0.994782360205754,0.38992817423824,0.898819408654221,0.216138049874694,0.398282546508734,0,0,0,0.203651327845314,0.387904974335251,0.631222379012867,0.442655759869801,1.03327103585722,0,1.1105744752962,0.592905254174298,0.166845105716094,0.393117990226406,0,0.202860121388503,0.72353147925725,0.50925170356284,2.5892652370573,1.62135226775035,3.0201755450689,4.31304619582064,2.60498663367952,4.05648975048929,3.53610429125956,1.97337154874103,2.41221760681684,0.554259570499814,0,0.162964976442026,0,0.704070744865506,0.335012514883631,2.38043640886014,0.195133647857799,0.157635144106191,0.44292937929755,0.637819074629948,1.96635977658886,1.55416483679306,1.01254341007058,0,0,0,1.10374698521893,10.5963389391943,7.61875962849321,0,0.252470927204373,0.315508219416257,0.390438744296638,0.646270193198397,0,0,0,0,0.584511715822624,0.395287777946524,17.3513510867776,0.851640511249612,0.178065603667255,1.14020871547503,0.824850614862677,3.98235415019888,0.242780636154981,0.906970670894253,2.26326095707078,2.65771703592696,1.53717573971964,2.84271122485043,2.54473610634254,2.85197902707777,7.58488219045958,1.05418608574999,1.03135543248187,4.76615448055303,0,0.258717367565509,0,0.709360934569094,3.38900753443934,3.62007845324666,3.65357938937519,0.23467170806371,0.21183207086382,0.441056796109924,4.28704257647848,6.29711264114032,2.0506394475573,3.70054266409723,6.72977688954751,0.582961673259701,7.78786268444141,0,0.206386867963223,0.185194527369712,0,0,0.228778173206523,0.169978429993855,0,0,3.81868247206045,0,0.609958401380546,0.86404272657441,0.627264888043406,1.09181281873089,1.34864346384821,2.89287095038676,2.35580347785627,1.03691978633434,1.86401793926078,0,0,0.165458490457098,0.194451188344048,0.258319646955462,0,0.469428954583016,0.2604087696879,0.419437377702843,0.483168241652012,0,0.316011120628178,0,0,0,0,0.198681354781265,0,0,0,0.0762068066549998,0,0.0974578807397524,0,0,3.17422537061296,0,0,0,0.386379188064381,0.93841237725591,0.73260649706906,5.14484109789758,0,16.942555278512,11.9684561491866,17.1868654031819,13.2326950404639,10.9613203163303,12.0863023582352,8.10027000278167,11.7083512838297,8.60970577069989,9.31968561153276,0.103787347584177,0.399024873401031,1.02440163452481,1.70174701947806,1.25767897576789,3.30918315210025,4.22268782823069,3.09052585858341,1.92551525755089,1.76888048234658,3.54871019846336,3.58390048633545,2.99652823903624,3.3293079250532,2.92920891673628,4.28664322154766,2.89710814862139,2.70072908649187,2.47251540481984,3.38557516309114,2.05721551431249,4.08194354166476,3.33810665926249,2.90692833264657,3.01150017329058,2.28459441307527,4.024415403201,4.20911538300549,3.39510284614654,3.36685362994643,3.91495559809775,3.84167481264697,1.22769312950907,3.25367366490529,4.24394544158511,4.49659040288303,2.10538447600868,2.79332370262788,1.72159498861959,1.76473135295612,2.55054619182464 | |||
|short_description=p2@Sybu | |||
}} |
Revision as of 06:37, 5 August 2015
Short description: | p2@Sybu |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_Sybu_5end |
Coexpression cluster: | MCL_coexpression_mm9:13 |
Association with transcript: | 188bp_to_uc007vqd.1_5end |
EntrezGene: | 319613 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 1.96e-17 | 23 |
neuroblast (sensu Vertebrata) | 1.96e-17 | 23 |
neuron | 7.63e-10 | 33 |
neuronal stem cell | 7.63e-10 | 33 |
neuroblast | 7.63e-10 | 33 |
electrically signaling cell | 7.63e-10 | 33 |
electrically responsive cell | 2.62e-07 | 39 |
electrically active cell | 2.62e-07 | 39 |