FFCP PHASE1:Hg19::chr4:41259677..41259717,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding | |||
|HGNC=NA | |||
|TSSclassifier=strong | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C2791 | |||
|description=CAGE_peak_at_chr4:41259677..41259717,+ | |||
|id=chr4:41259677..41259717,+ | |||
|ontology_enrichment_celltype=CL:0000055!2.38e-24!180;CL:0000393!7.17e-19!60;CL:0000211!7.17e-19!60;CL:0000222!1.93e-18!119;CL:0000192!1.15e-16!42;CL:0000514!1.15e-16!42;CL:0000680!3.20e-16!57;CL:0000056!3.20e-16!57;CL:0000355!3.20e-16!57;CL:0000183!5.67e-16!59;CL:0000187!8.37e-16!54;CL:0000359!5.98e-13!32;CL:0002321!2.42e-11!248;CL:0000220!5.36e-11!246;CL:0000077!1.70e-08!19 | |||
|ontology_enrichment_celltype_v019=CL:0000192;6.82e-14;43!CL:0000359;3.22e-13;32!CL:0000393;1.55e-10;61!CL:0000211;1.55e-10;61!CL:0000187;6.32e-09;55!CL:0000077;6.39e-09;19 | |||
|ontology_enrichment_celltype_v019_2=CL:0000393,2.01e-20,61;CL:0000211,2.01e-20,61;CL:0000192,1.26e-19,43;CL:0000514,1.26e-19,43;CL:0000187,2.76e-16,55;CL:0000222,8.78e-16,121;CL:0000680,9.96e-16,58;CL:0000056,9.96e-16,58;CL:0000355,9.96e-16,58;CL:0000359,3.05e-14,32;CL:0000077,1.45e-09,19;CL:0002321,1.79e-08,250 | |||
|ontology_enrichment_development_v019=CL:0000514;6.82e-14;43!CL:0000355;3.62e-08;58 | |||
|ontology_enrichment_disease=DOID:2394!5.74e-08!14 | |||
|ontology_enrichment_disease_v019=DOID:2394;3.24e-10;14 | |||
|ontology_enrichment_disease_v019_2=DOID:2394,2.75e-10,14 | |||
|ontology_enrichment_uberon=UBERON:0000119!2.60e-20!312;UBERON:0000483!3.92e-20!309;UBERON:0000025!1.09e-18!194;UBERON:0000475!1.38e-18!365;UBERON:0000073!2.44e-17!94;UBERON:0001016!2.44e-17!94;UBERON:0005743!3.45e-16!86;UBERON:0000914!5.45e-16!83;UBERON:0002329!5.45e-16!83;UBERON:0003077!5.45e-16!83;UBERON:0003059!5.45e-16!83;UBERON:0007282!5.45e-16!83;UBERON:0009618!5.45e-16!83;UBERON:0007285!5.45e-16!83;UBERON:0001017!1.54e-15!82;UBERON:0004290!1.07e-14!70;UBERON:0004111!1.69e-14!241;UBERON:0001134!4.72e-14!61;UBERON:0002036!4.72e-14!61;UBERON:0003082!4.72e-14!61;UBERON:0002385!2.98e-13!63;UBERON:0001015!2.98e-13!63;UBERON:0000383!2.98e-13!63;UBERON:0000955!6.66e-13!69;UBERON:0006238!6.66e-13!69;UBERON:0001637!1.33e-12!42;UBERON:0003509!1.33e-12!42;UBERON:0004572!1.33e-12!42;UBERON:0005256!1.62e-12!143;UBERON:0000477!2.14e-12!286;UBERON:0000481!1.23e-11!347;UBERON:0002020!1.29e-11!34;UBERON:0003528!1.29e-11!34;UBERON:0001049!1.66e-11!57;UBERON:0005068!1.66e-11!57;UBERON:0006241!1.66e-11!57;UBERON:0007135!1.66e-11!57;UBERON:0002616!1.84e-11!59;UBERON:0004573!2.42e-11!33;UBERON:0004571!2.42e-11!33;UBERON:0000486!3.42e-11!82;UBERON:0002346!4.07e-11!90;UBERON:0003080!7.28e-11!42;UBERON:0002780!8.53e-11!41;UBERON:0001890!8.53e-11!41;UBERON:0006240!8.53e-11!41;UBERON:0001869!9.42e-11!32;UBERON:0001893!1.10e-10!34;UBERON:0003075!1.32e-10!86;UBERON:0007284!1.32e-10!86;UBERON:0002791!1.66e-10!33;UBERON:0002100!2.13e-10!216;UBERON:0000956!4.88e-10!25;UBERON:0000203!4.88e-10!25;UBERON:0003056!6.13e-10!61;UBERON:0004872!1.52e-09!84;UBERON:0001981!1.56e-09!60;UBERON:0007500!1.56e-09!60;UBERON:0004537!1.56e-09!60;UBERON:0006965!1.56e-09!60;UBERON:0002619!1.59e-09!22;UBERON:0002049!2.65e-09!79;UBERON:0007798!2.65e-09!79;UBERON:0000468!2.77e-09!659;UBERON:0000924!3.69e-09!173;UBERON:0006601!3.69e-09!173;UBERON:0000033!5.79e-09!123;UBERON:0004121!1.08e-08!169;UBERON:0003914!1.18e-08!118;UBERON:0001950!1.22e-08!20;UBERON:0000922!3.05e-08!612;UBERON:0000055!3.76e-08!69;UBERON:0000153!7.73e-08!129;UBERON:0007811!7.73e-08!129;UBERON:0000923!1.13e-07!604;UBERON:0005291!1.13e-07!604;UBERON:0006598!1.13e-07!604;UBERON:0002532!1.13e-07!604;UBERON:0002050!1.60e-07!605;UBERON:0005423!1.60e-07!605;UBERON:0004535!2.92e-07!110;UBERON:0000480!4.57e-07!626;UBERON:0000467!4.72e-07!625;UBERON:0001009!6.34e-07!113 | |||
|ontology_enrichment_uberon_v019=UBERON:0002619;8.95e-10;22!UBERON:0001869;3.60e-09;32!UBERON:0000956;3.66e-09;25!UBERON:0000203;3.66e-09;25!UBERON:0003528;6.34e-09;34!UBERON:0002020;6.34e-09;34!UBERON:0001950;1.36e-08;20!UBERON:0002791;2.99e-08;32!UBERON:0001893;5.29e-08;34!UBERON:0004573;2.48e-07;33!UBERON:0004571;2.48e-07;33 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007503,7.11e-15,78;UBERON:0007524,3.54e-14,73;UBERON:0001134,7.38e-14,62;UBERON:0002036,7.38e-14,62;UBERON:0003082,7.38e-14,62;UBERON:0003077,8.42e-14,72;UBERON:0007285,8.42e-14,72;UBERON:0002329,3.19e-13,71;UBERON:0003059,3.19e-13,71;UBERON:0007282,3.19e-13,71;UBERON:0004290,3.19e-13,71;UBERON:0009618,3.19e-13,71;UBERON:0002385,5.07e-13,64;UBERON:0001015,5.07e-13,64;UBERON:0000383,5.07e-13,64;UBERON:0000025,2.11e-12,192;UBERON:0000483,2.18e-12,306;UBERON:0000119,5.81e-12,309;UBERON:0001637,1.40e-10,42;UBERON:0003509,1.40e-10,42;UBERON:0004572,1.40e-10,42;UBERON:0003528,1.42e-10,34;UBERON:0002020,1.42e-10,34;UBERON:0002619,3.50e-10,22;UBERON:0001869,4.52e-10,32;UBERON:0004111,1.41e-09,240;UBERON:0000956,1.55e-09,25;UBERON:0000203,1.55e-09,25;UBERON:0000486,1.98e-09,83;UBERON:0002791,2.72e-09,32;UBERON:0001016,3.41e-09,89;UBERON:0005256,3.45e-09,122;UBERON:0001893,4.42e-09,34;UBERON:0001017,4.66e-09,81;UBERON:0001950,6.05e-09,20;UBERON:0004573,7.14e-09,33;UBERON:0004571,7.14e-09,33;UBERON:0003104,1.19e-08,160;UBERON:0009142,1.19e-08,160;UBERON:0002100,1.04e-07,199;UBERON:0003914,2.28e-07,117;UBERON:0004872,2.56e-07,83;UBERON:0002780,3.09e-07,41;UBERON:0001890,3.09e-07,41;UBERON:0003080,3.09e-07,41;UBERON:0006240,3.09e-07,41;UBERON:0007500,8.05e-07,59;UBERON:0001981,8.05e-07,59;UBERON:0004537,8.05e-07,59;UBERON:0006965,8.05e-07,59;UBERON:0003056,9.09e-07,61;UBERON:0002346,9.27e-07,86 | |||
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| |||
|short_description=p@chr4:41259677..41259717,+ | |||
}} |
Revision as of 00:51, 22 January 2014
Short description: | p@chr4:41259677..41259717, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr4:41259677..41259717, + |
Coexpression cluster: | C2791_iPS_medial_leiomyoma_smallcell_Neurons_Smooth_mixed |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
electrically responsive cell | 2.01e-20 | 61 |
electrically active cell | 2.01e-20 | 61 |
smooth muscle cell | 1.26e-19 | 43 |
smooth muscle myoblast | 1.26e-19 | 43 |
muscle cell | 2.76e-16 | 55 |
mesodermal cell | 8.78e-16 | 121 |
muscle precursor cell | 9.96e-16 | 58 |
myoblast | 9.96e-16 | 58 |
multi-potent skeletal muscle stem cell | 9.96e-16 | 58 |
vascular associated smooth muscle cell | 3.05e-14 | 32 |
mesothelial cell | 1.45e-09 | 19 |
embryonic cell | 1.79e-08 | 250 |
Ontology term | p-value | n |
---|---|---|
ovarian cancer | 2.75e-10 | 14 |