FFCP PHASE1:Hg19::chr6:13272941..13272965,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=221692 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=20990 | |||
|TSSclassifier=weak | |||
|UniProt=Q4VY13 | |||
|association_with_transcript=-23bp_to_ENST00000379329_5end | |||
|coexpression_cluster_id=C2 | |||
|description=CAGE_peak_1_at_PHACTR1_5end | |||
|id=chr6:13272941..13272965,+ | |||
|ontology_enrichment_celltype=CL:0000037!3.69e-73!172;CL:0000566!3.69e-73!172;CL:0002032!3.63e-69!165;CL:0000837!3.63e-69!165;CL:0000988!3.08e-66!182;CL:0000738!6.29e-59!140;CL:0000763!2.11e-58!112;CL:0000049!2.11e-58!112;CL:0002031!1.36e-46!124;CL:0002087!5.92e-45!119;CL:0000766!3.59e-43!76;CL:0000557!1.58e-38!71;CL:0000839!6.83e-37!70;CL:0002009!9.38e-36!65;CL:0002194!2.89e-34!63;CL:0000576!2.89e-34!63;CL:0000040!2.89e-34!63;CL:0000559!2.89e-34!63;CL:0002057!2.69e-33!42;CL:0000860!1.45e-29!45;CL:0000945!2.19e-13!24;CL:0000826!2.19e-13!24;CL:0000134!1.01e-10!358;CL:0000542!1.93e-10!53;CL:0000051!1.93e-10!53;CL:0002320!3.74e-10!365;CL:0000838!6.62e-10!52;CL:0000219!7.16e-10!390;CL:0000236!1.19e-09!14;CL:0000451!3.35e-08!10;CL:0000094!7.56e-08!8;CL:0002393!4.94e-07!9;CL:0002397!4.94e-07!9;CL:0000990!9.46e-07!8 | |||
|ontology_enrichment_celltype_v019=CL:0000860;2.05e-31;33!CL:0002057;2.05e-31;33!CL:0000473;2.16e-29;39!CL:0000234;2.16e-29;39!CL:0000576;4.47e-28;48!CL:0000766;5.16e-25;69!CL:0000763;2.93e-22;100!CL:0000738;1.09e-15;136!CL:0002087;1.20e-15;104!CL:0000988;1.25e-13;177!CL:0000945;8.48e-13;24!CL:0000236;6.08e-10;13!CL:0000451;6.76e-10;10!CL:0000094;1.78e-09;8!CL:0000990;4.46e-08;8!CL:0000148;4.02e-07;10!CL:0002393;9.17e-07;6!CL:0002397;9.17e-07;6 | |||
|ontology_enrichment_celltype_v019_2=CL:0000037,3.87e-86,168;CL:0002032,5.30e-81,161;CL:0000837,5.30e-81,161;CL:0000988,3.55e-79,177;CL:0000763,4.67e-78,108;CL:0000049,4.67e-78,108;CL:0000738,4.88e-69,136;CL:0000766,5.90e-60,72;CL:0000557,6.52e-54,67;CL:0002031,1.42e-52,120;CL:0002087,1.44e-51,115;CL:0002009,1.71e-50,61;CL:0000839,2.06e-50,66;CL:0002194,1.42e-48,59;CL:0000576,1.42e-48,59;CL:0000040,1.42e-48,59;CL:0000559,1.42e-48,59;CL:0000473,2.00e-45,48;CL:0000234,2.00e-45,48;CL:0000860,1.55e-41,42;CL:0002057,1.55e-41,42;CL:0000134,9.14e-20,354;CL:0000219,1.26e-19,386;CL:0002320,1.52e-18,361;CL:0000945,8.56e-13,24;CL:0000826,8.56e-13,24;CL:0000236,1.20e-10,14;CL:0000034,2.64e-10,441;CL:0000451,6.46e-10,10;CL:0000048,7.05e-10,427;CL:0000094,1.79e-09,8;CL:0000723,3.09e-09,433;CL:0002393,1.89e-08,9;CL:0002397,1.89e-08,9;CL:0000990,4.27e-08,8;CL:0000542,1.23e-07,53;CL:0000051,1.23e-07,53;CL:0000148,4.17e-07,10;CL:0000541,4.17e-07,10;CL:0000838,4.23e-07,52 | |||
|ontology_enrichment_development_v019=CL:0002057;5.39e-30;42!CL:0000049;1.21e-20;108 | |||
|ontology_enrichment_disease=DOID:8692!1.00e-11!31;DOID:1240!3.62e-10!39;DOID:2531!7.90e-10!51;DOID:0060083!7.90e-10!51 | |||
|ontology_enrichment_disease_v019=DOID:8692;2.44e-14;31!DOID:1240;3.04e-11;39 | |||
|ontology_enrichment_disease_v019_2=DOID:8692,7.88e-15,31;DOID:1240,1.82e-13,39;DOID:2531,1.37e-10,51;DOID:0060083,1.37e-10,51 | |||
|ontology_enrichment_uberon=UBERON:0002390!4.70e-39!102;UBERON:0003061!4.70e-39!102;UBERON:0002193!1.87e-34!112;UBERON:0002371!8.73e-33!80;UBERON:0001474!2.47e-28!86;UBERON:0004765!3.31e-22!101;UBERON:0001434!3.31e-22!101;UBERON:0002405!1.47e-21!115;UBERON:0007023!4.33e-16!115;UBERON:0002384!1.46e-09!375;UBERON:0003081!2.96e-08!216 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,2.35e-53,98;UBERON:0003061,2.35e-53,98;UBERON:0002193,3.02e-48,108;UBERON:0002371,4.70e-46,76;UBERON:0002405,4.64e-42,93;UBERON:0001474,9.63e-41,82;UBERON:0004765,8.31e-35,90;UBERON:0001434,8.58e-29,100;UBERON:0002384,2.23e-17,371;UBERON:0003081,2.99e-14,203;UBERON:0002204,2.11e-09,167 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0.247532705920093,0,0,0,0,0,0,0,0,0,0,0,106.138220583904,96.3860920142363,108.857010556818,196.682138424452,182.318964096176,245.848003825929,0,0,0,0.46480320348181,25.5904618477359,29.3600439334847,339.045190021509,298.811226730511,200.952066282879,14.1066748771152,23.9681312854045,9.01514486719653,140.454698661059,296.254739852027,159.862896322771,517.154607115148,683.772197780296,992.918625089702,579.987862921455,679.594354421704,780.864323092108,987.351629629676,1119.27044133435,1241.86088207011,461.381974218924,579.106850422749,622.034604943994,761.230640326435,1126.46088503709,996.726579120705,132.930073975247,316.748288303151,151.736011189639,526.72976811088,630.932369856547,740.535654055739,522.597223734026,622.65060459372,936.083920679053,355.369508045787,959.731519383594,816.789421984923,68.4467127650691,75.8997350875205,55.1402237687029,59.9834890322284,37.0936925318521,58.9862903178284,25.3661341929711,17.3057509163208,12.6038266097597,54.55883578301,70.451880852815,59.5971200088582,73.3975982814392,53.2526662757897,65.5217781548111,68.7486667696257,63.9216015538694,141.734029308253,156.20509237267,169.729313287602,63.4422377179324,164.789517516572,22.9144153754317,1.57367816091066,0.393010762749165,2.05601498999509,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.07016331235885,0,0,0.766440987203842,0,0,0.637130828648193,0.651083453856419,0,4.36667845325541,1.53583933385302,2.49861453104692,0.947109008176067,0,0.201606743224732,0,0.144824403882799,0,0,0,0,0,0,0,0,0,0,0.175669571386252,3.33996642519167,0,0,4.86821090482025,6.26867054277362,7.31268782853758,195.800802554686,211.066122077867,190.929155683396,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1560.28014244299,2644.66140149158,0,0,0,0,0,0.709336764396714,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.300476117813194,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.16193942869518,3.93912009058408,0.252320850875628,0,0,0,0,0,0,0.118306800039844,0,0,0.220587945464788,0,0,0.134831308160164,0,0,0,0,0,0,0,0,0,0,0.122988438543114,0,0.219500570817251,0,0,0,0,0,0,0,0,0,0,0,0,0,13.0495013226321,12.4022260523796,8.32334508816878,0,0,0,0,0,0.383382679165211,1.47798971368783,6.16339038092582,61.3691222000685,10.0883967391873,37.4940027276348,313.679597803315,550.445321229478,195.753136840778,114.618538835213,111.053692119589,249.585081068295,34.8708247809305,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,80.2716952231857,54.7460229661018,46.383466686267,0,0,0,0,0,0,0,19.1119837395869,2.80315847317372,9.24069861214188,0,0,0,0.502548796003046,0,228.447142303891,164.538802562214,819.299470063042,0,0,0,0,0,0.315404830067869,0,0,0,0,0,0,0,0.195801157462741,0,72.7823451952564,116.701382642872,68.946002341025,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.241718899183244,0,0,0,0,0,0.451199612907412,0.0770153371044148,0,0,0.105551628892876,0,0,0,0,0,0,0.254876273045038,2.49322802678617,0.447749509444357,0.877039506583738,1.0457418040996,0,0,0,18.0321770383514,0,0,0.574265537996172,0,0,0,0,0,0,0,0,0.0852266274161009,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.24715801637306,0,0.6196469961995,0,0,0,0,0,0.633322905892992,0,0,0,0,0.670302275535787,0,15.9103023312757,0,0,0,0,31.9691993816267,12.9988325214204,9.1143549947866,10.7204298956005,25.0930986582578,39.5568719827558,23.7613832384771,8.72437693923697,0,0,0,166.851251262895,127.101176632248,0,0,47.1007316581447,70.473976208711,59.691950328135,27.9174868636118,18.5326137554883,21.4540598291201,13.317791140707,0,38.0906500053607,5.78117070373318,9.08098682359714,4.68430861459359,15.1142351692536,10.4461859864876,14.3152709051146,12.3468364866812,21.8834666850285,0,6.15436994738562,67.3434639405198,0,12.6888304579065,0,4.54175355742871,0,8.02392366797844,0,0.47748896947538,7.12715233998333,0,0,0.844016498463076,0,0.16480387422676,0,2.78947183551498,20.1687258337738,0,0,68.1889822254325,0,0,0,1.53471711068062,4.43895325366201,16.7638164642858,0,1.93866549219044,0.185536196323703,0,0,0,2.17499872630438,0,0,0,0,0,0,0,0.60298219312704,0,0,0.886642856860642,0.658156191461918,0,0,0.846452843541768,0,0,2.51321404347362,63.8846546901407,2.23300811812344,1.19076871422421,4.26427820814908,0,19.9364925621681,31.2477961972294,10.3774003883903,15.6850027454192,17.7890882194393,4.55408958538044,31.469442638115,0,0,0.141353071433941,0,3.98104772431402,0.973033209536731,4.888241159469,0,0,0,2.02203398942031,0.802577647298789,0.702793337176017,0.547364367646998,0,0,0.789168805698781,3.62972148145992,0.30607276163049,7.01371033876216,0,0,0,0,0,0,0.284609546029793,0,0,0,0,1.57254001417827,0,0,0,0,0.969890164884194,0,1.35588444468319,0,0,0.633107959558787,0,0,1.49417096317547,0,0,0,0,0,0,0,0,0,0,0,0.600420288709789,0.410716136675979,11.4971929260275,0,0,2.51354161145029,0.229160424011684,1.43574604915363,0.199679000498991,0,0.669514372325618,0.873385142327441,0,0,0,0,0,0,0.338693328263138,0,0.272406812223151,0,0,0,264.569296464565,102.915659956207,0.850493793212345,0,5.04356526714868,2.9899115236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| |||
|short_description=p1@PHACTR1 | |||
}} |
Revision as of 10:04, 22 January 2014
Short description: | p1@PHACTR1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_PHACTR1_5end |
Coexpression cluster: | C2_Eosinophils_Neutrophils_CD14_Whole_Basophils_Peripheral_Mast |
Association with transcript: | -23bp_to_ENST00000379329_5end |
EntrezGene: | PHACTR1 |
HGNC: | 20990 |
UniProt: | Q4VY13 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 2.35e-53 | 98 |
blood island | 2.35e-53 | 98 |
hemolymphoid system | 3.02e-48 | 108 |
bone marrow | 4.70e-46 | 76 |
immune system | 4.64e-42 | 93 |
bone element | 9.63e-41 | 82 |
skeletal element | 8.31e-35 | 90 |
skeletal system | 8.58e-29 | 100 |
connective tissue | 2.23e-17 | 371 |
lateral plate mesoderm | 2.99e-14 | 203 |
musculoskeletal system | 2.11e-09 | 167 |
Ontology term | p-value | n |
---|---|---|
myeloid leukemia | 7.88e-15 | 31 |
leukemia | 1.82e-13 | 39 |
hematologic cancer | 1.37e-10 | 51 |
immune system cancer | 1.37e-10 | 51 |