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{{FFCP|EntrezGene=21960|HGNC=|MCL_coexpression_id=1|UniProt=Q8BYI9|association_with_transcript=0bp_to_NM_022312,uc007dea.2_5end|description=CAGE_peak_1_at_Tnr_5end|id=chr1:161453899..161454004,+|ontology_enrichment_celltype=CL:0000540!2.13e-17!33;CL:0000047!2.13e-17!33;CL:0000031!2.13e-17!33;CL:0000404!2.13e-17!33;CL:0002319!9.04e-16!43;CL:0000221!9.13e-16!44;CL:0000133!9.13e-16!44;CL:0000117!2.06e-13!23;CL:0000337!2.06e-13!23;CL:0000393!2.80e-12!39;CL:0000211!2.80e-12!39;CL:0000055!3.99e-11!50|ontology_enrichment_celltype_v019_2=CL:0000540,9.50e-20,33;CL:0000047,9.50e-20,33;CL:0000031,9.50e-20,33;CL:0000404,9.50e-20,33;CL:0002319,2.85e-16,43;CL:0000117,1.22e-15,23;CL:0000337,1.22e-15,23;CL:0000221,1.38e-15,44;CL:0000133,1.38e-15,44;CL:0000393,9.96e-15,39;CL:0000211,9.96e-15,39|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001017!1.70e-35!73;UBERON:0005743!1.70e-35!73;UBERON:0000073!2.09e-35!75;UBERON:0001016!2.09e-35!75;UBERON:0004121!3.30e-33!102;UBERON:0000924!3.30e-33!102;UBERON:0006601!3.30e-33!102;UBERON:0002346!2.80e-31!71;UBERON:0003075!2.80e-31!71;UBERON:0007284!2.80e-31!71;UBERON:0000033!8.88e-26!63;UBERON:0001049!3.10e-25!52;UBERON:0005068!3.10e-25!52;UBERON:0006241!3.10e-25!52;UBERON:0007135!3.10e-25!52;UBERON:0000955!3.48e-24!50;UBERON:0006238!3.48e-24!50;UBERON:0002616!1.86e-23!49;UBERON:0003056!5.56e-21!49;UBERON:0002020!1.53e-18!34;UBERON:0003080!2.84e-18!40;UBERON:0002780!1.52e-17!39;UBERON:0001890!1.52e-17!39;UBERON:0006240!1.52e-17!39;UBERON:0002791!1.85e-15!29;UBERON:0003528!1.85e-15!29;UBERON:0001893!1.85e-15!29;UBERON:0007811!1.42e-12!86;UBERON:0000956!4.79e-11!21;UBERON:0001869!4.79e-11!21;UBERON:0000203!4.79e-11!21;UBERON:0000153!1.19e-10!94;UBERON:0002619!6.15e-09!17;UBERON:0002021!7.93e-09!10;UBERON:0000411!7.93e-09!10;UBERON:0001950!7.93e-09!10;UBERON:0003076!1.53e-07!12;UBERON:0003057!1.53e-07!12|ontology_enrichment_uberon_v019_2=UBERON:0001017,8.46e-40,73;UBERON:0001016,5.32e-38,75;UBERON:0002346,8.53e-34,64;UBERON:0003075,8.53e-34,64;UBERON:0007284,8.53e-34,64;UBERON:0004121,3.94e-33,95;UBERON:0000924,3.94e-33,95;UBERON:0006601,3.94e-33,95;UBERON:0000073,7.95e-31,54;UBERON:0001049,5.45e-29,52;UBERON:0005068,5.45e-29,52;UBERON:0006241,5.45e-29,52;UBERON:0007135,5.45e-29,52;UBERON:0010371,1.12e-26,73;UBERON:0000955,3.90e-25,47;UBERON:0006238,3.90e-25,47;UBERON:0002616,2.71e-24,46;UBERON:0003056,2.94e-23,49;UBERON:0002020,3.79e-22,34;UBERON:0010314,1.41e-21,92;UBERON:0003080,9.49e-21,40;UBERON:0002780,6.86e-20,39;UBERON:0001890,6.86e-20,39;UBERON:0006240,6.86e-20,39;UBERON:0003528,1.79e-18,29;UBERON:0002791,1.79e-18,29;UBERON:0001893,1.79e-18,29;UBERON:0000956,3.26e-13,21;UBERON:0001869,3.26e-13,21;UBERON:0000203,3.26e-13,21;UBERON:0002619,1.06e-10,17;UBERON:0002021,3.41e-10,10;UBERON:0000411,3.41e-10,10;UBERON:0001950,3.41e-10,10;UBERON:0003076,1.14e-08,12;UBERON:0003057,1.14e-08,12|phase1_expression=0.160148847104794,0,0,0,0.500895729946347,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,8.84450217571126,0,0,0,0,0,0,0.215471232685889,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.56478268869608,1.09012578190223,0,0,0.699932108126813,0,0,0,0,0,0,0,9.3065571995415,8.99284664762456,10.1413024560989,0,0,0,0,0,17.3768064100675,10.7581125490035,6.73982480005105,6.88530285491622,6.73039876324422,29.9933533623994,26.283356373242,6.85948475603743,4.79227355091182,4.5960939330501,38.540558349786,37.6677647351304,35.1758961156798,5.67111037239834,6.86157327018072,5.2091337055676,22.6138229191119,30.3891809417107,37.7411672008721,25.6326869362091,23.6336990126511,11.7431650869939,0.605809546665472,0.529000920747499,0,0,0,0,0,0,1.12355536105401,0,0,0,0.704217098883403,0,0,0,0,0,0,1.48439043634778,0,5.19547486726887,1.04091196059682,1.21786191324856,1.15307748628029,1.65794904607885,2.3517741427141,1.13099932196708,0,0,0,0,0,0,0,28.6925181071316,50.2672096352292,0,0,0,0,42.6903322303745,33.8550446085784,14.7015591972051,64.3149984711423,80.8060845163844,37.8174241098399,59.8670260720026,0,0,0,5.89237196482127,0.390361328888111,1.83921683546778,3.24111833649629,2.71268672104287,3.06164246180975,4.74020765053944,4.59138450342671,18.3679393224701,0,0,0,0.219195732427575,0.278047249225598,0,0.205782136407943,0.199034266818493,0,0,0,0,0,0,0,0,0,0,0,0.116765342367169,0,0.164167464079095,0,0,0,0,74.0220618945728,14.3037411207205,0,0,0.639864751605702,2.78684006232526,2.19074684247559,1.61346819698674,1.11189021922435,0.190225626112559,0,0.329397909448022,0.502670417600539,0.397912944082302,0.19496408711912,0,0.432276099749388,0.398282546508734,0,0.228497025219458,0,0,0,0.0701358198903186,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.169745085775188,0,0,0,0.195133647857799,0.157635144106191,0,0,0,0,0,0,0,0,0,30.9862638676438,50.0493901748708,0.655739781506702,0.252470927204373,7.2566890465739,5.46614242015294,14.4333676480975,4.30143836314594,7.5751549188014,5.94460714656548,7.2865926301481,8.76767573733936,7.11518000303742,35.9879874392424,0.141940085208269,0.17806560366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{{FFCP
|DHSsupport=NA
|DPIdataset=NA
|EntrezGene=entrezgene:21960
|HGNC=
|MCL_coexpression_id=1
|TSSclassifier=NA
|UniProt=uniprot:Q8BYI9
|association_with_transcript=0bp_to_NM_022312,uc007dea.2_5end
|cluster_id=chr1:161453899..161454004,+
|description=CAGE_peak_1_at_Tnr_5end
|id=chr1:161453899..161454004,+
|ontology_enrichment_celltype=CL:0000540!2.13e-17!33;CL:0000047!2.13e-17!33;CL:0000031!2.13e-17!33;CL:0000404!2.13e-17!33;CL:0002319!9.04e-16!43;CL:0000221!9.13e-16!44;CL:0000133!9.13e-16!44;CL:0000117!2.06e-13!23;CL:0000337!2.06e-13!23;CL:0000393!2.80e-12!39;CL:0000211!2.80e-12!39;CL:0000055!3.99e-11!50
|ontology_enrichment_celltype_v019_2=CL:0000540,9.50e-20,33;CL:0000047,9.50e-20,33;CL:0000031,9.50e-20,33;CL:0000404,9.50e-20,33;CL:0002319,2.85e-16,43;CL:0000117,1.22e-15,23;CL:0000337,1.22e-15,23;CL:0000221,1.38e-15,44;CL:0000133,1.38e-15,44;CL:0000393,9.96e-15,39;CL:0000211,9.96e-15,39
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0001017!1.70e-35!73;UBERON:0005743!1.70e-35!73;UBERON:0000073!2.09e-35!75;UBERON:0001016!2.09e-35!75;UBERON:0004121!3.30e-33!102;UBERON:0000924!3.30e-33!102;UBERON:0006601!3.30e-33!102;UBERON:0002346!2.80e-31!71;UBERON:0003075!2.80e-31!71;UBERON:0007284!2.80e-31!71;UBERON:0000033!8.88e-26!63;UBERON:0001049!3.10e-25!52;UBERON:0005068!3.10e-25!52;UBERON:0006241!3.10e-25!52;UBERON:0007135!3.10e-25!52;UBERON:0000955!3.48e-24!50;UBERON:0006238!3.48e-24!50;UBERON:0002616!1.86e-23!49;UBERON:0003056!5.56e-21!49;UBERON:0002020!1.53e-18!34;UBERON:0003080!2.84e-18!40;UBERON:0002780!1.52e-17!39;UBERON:0001890!1.52e-17!39;UBERON:0006240!1.52e-17!39;UBERON:0002791!1.85e-15!29;UBERON:0003528!1.85e-15!29;UBERON:0001893!1.85e-15!29;UBERON:0007811!1.42e-12!86;UBERON:0000956!4.79e-11!21;UBERON:0001869!4.79e-11!21;UBERON:0000203!4.79e-11!21;UBERON:0000153!1.19e-10!94;UBERON:0002619!6.15e-09!17;UBERON:0002021!7.93e-09!10;UBERON:0000411!7.93e-09!10;UBERON:0001950!7.93e-09!10;UBERON:0003076!1.53e-07!12;UBERON:0003057!1.53e-07!12
|ontology_enrichment_uberon_v019_2=UBERON:0001017,8.46e-40,73;UBERON:0001016,5.32e-38,75;UBERON:0002346,8.53e-34,64;UBERON:0003075,8.53e-34,64;UBERON:0007284,8.53e-34,64;UBERON:0004121,3.94e-33,95;UBERON:0000924,3.94e-33,95;UBERON:0006601,3.94e-33,95;UBERON:0000073,7.95e-31,54;UBERON:0001049,5.45e-29,52;UBERON:0005068,5.45e-29,52;UBERON:0006241,5.45e-29,52;UBERON:0007135,5.45e-29,52;UBERON:0010371,1.12e-26,73;UBERON:0000955,3.90e-25,47;UBERON:0006238,3.90e-25,47;UBERON:0002616,2.71e-24,46;UBERON:0003056,2.94e-23,49;UBERON:0002020,3.79e-22,34;UBERON:0010314,1.41e-21,92;UBERON:0003080,9.49e-21,40;UBERON:0002780,6.86e-20,39;UBERON:0001890,6.86e-20,39;UBERON:0006240,6.86e-20,39;UBERON:0003528,1.79e-18,29;UBERON:0002791,1.79e-18,29;UBERON:0001893,1.79e-18,29;UBERON:0000956,3.26e-13,21;UBERON:0001869,3.26e-13,21;UBERON:0000203,3.26e-13,21;UBERON:0002619,1.06e-10,17;UBERON:0002021,3.41e-10,10;UBERON:0000411,3.41e-10,10;UBERON:0001950,3.41e-10,10;UBERON:0003076,1.14e-08,12;UBERON:0003057,1.14e-08,12
|phase1_expression=0.160148847104794,0,0,0,0.500895729946347,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,8.84450217571126,0,0,0,0,0,0,0.215471232685889,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.56478268869608,1.09012578190223,0,0,0.699932108126813,0,0,0,0,0,0,0,9.3065571995415,8.99284664762456,10.1413024560989,0,0,0,0,0,17.3768064100675,10.7581125490035,6.73982480005105,6.88530285491622,6.73039876324422,29.9933533623994,26.283356373242,6.85948475603743,4.79227355091182,4.5960939330501,38.540558349786,37.6677647351304,35.1758961156798,5.67111037239834,6.86157327018072,5.2091337055676,22.6138229191119,30.3891809417107,37.7411672008721,25.6326869362091,23.6336990126511,11.7431650869939,0.605809546665472,0.529000920747499,0,0,0,0,0,0,1.12355536105401,0,0,0,0.704217098883403,0,0,0,0,0,0,1.48439043634778,0,5.19547486726887,1.04091196059682,1.21786191324856,1.15307748628029,1.65794904607885,2.3517741427141,1.13099932196708,0,0,0,0,0,0,0,28.6925181071316,50.2672096352292,0,0,0,0,42.6903322303745,33.8550446085784,14.7015591972051,64.3149984711423,80.8060845163844,37.8174241098399,59.8670260720026,0,0,0,5.89237196482127,0.390361328888111,1.83921683546778,3.24111833649629,2.71268672104287,3.06164246180975,4.74020765053944,4.59138450342671,18.3679393224701,0,0,0,0.219195732427575,0.278047249225598,0,0.205782136407943,0.199034266818493,0,0,0,0,0,0,0,0,0,0,0,0.116765342367169,0,0.164167464079095,0,0,0,0,74.0220618945728,14.3037411207205,0,0,0.639864751605702,2.78684006232526,2.19074684247559,1.61346819698674,1.11189021922435,0.190225626112559,0,0.329397909448022,0.502670417600539,0.397912944082302,0.19496408711912,0,0.432276099749388,0.398282546508734,0,0.228497025219458,0,0,0,0.0701358198903186,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.169745085775188,0,0,0,0.195133647857799,0.157635144106191,0,0,0,0,0,0,0,0,0,30.9862638676438,50.0493901748708,0.655739781506702,0.252470927204373,7.2566890465739,5.46614242015294,14.4333676480975,4.30143836314594,7.5751549188014,5.94460714656548,7.2865926301481,8.76767573733936,7.11518000303742,35.9879874392424,0.141940085208269,0.178065603667255,0,0,0,0.485561272309963,0.906970670894253,1.13163047853539,0.295301892880773,2.15204603560749,1.03371317267288,1.45413491791002,0.712994756769443,0.948110273807448,0,1.03135543248187,35.0652793926402,0,0.129358683782755,0.214337035031592,2.12808280370728,6.95638388648075,5.10101963866575,5.17590413494819,0,0,1.10264199027481,0,0,0,0,0,0,32.0785772478182,0,0,0,0,0,0,0,0,0,0.954670618015114,0.474503990371703,1.01659733563424,1.51207477150522,0.836353184057875,0.655087691238533,0.809186078308924,0.743881101528023,0.26175594198403,0.259229946583586,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.102710957164827,0.129920822977795,0,0,0,0,0,0,0,0,0,0,0.226730383615211,0,0,0,0.579568782096571,0,0,0,0,63.2522063731115,54.778703144354,52.7063872364245,40.9010573977977,52.7513540223395,49.8559972277202,43.8764625150674,50.8862959643369,47.1268105343573,36.2432218226274,0.207574695168353,1.59609949360412,1.19513524027894,3.64660075602441,1.88651846365184,2.38996560985018,3.77819437262746,3.29656091582231,3.85103051510178,3.28506375292937,5.83002389747551,3.01802146217722,2.34103768674706,3.84150914429216,2.75690250986944,2.38146845641537,4.51948871184936,3.47236596834669,3.70877310722976,3.09117732282234,2.40008476669791,3.90446773550542,2.86123427936785,3.48831399917588,3.67026583619789,3.21535509988371,4.93905526756486,3.41990624869196,3.39510284614654,2.24456908663095,3.55905054372522,2.36410757701352,3.6830793885272,2.47898945897546,2.3148793317737,6.49507502638659,2.33931608445408,3.43793686477277,0.765153328275374,1.76473135295612,1.85494268496337
|short_description=p1@Tnr
}}

Revision as of 02:19, 5 August 2015

Short description:p1@Tnr
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_1_at_Tnr_5end
Coexpression cluster:MCL_coexpression_mm9:1
Association with transcript: 0bp_to_NM_022312, uc007dea.2_5end
EntrezGene:21960
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p1@Tnr

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G70.16
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.00
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.00
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.50
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.00
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.00
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.00
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.00
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.00
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.00
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.00
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.00
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A38.84
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.00
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.00
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.00
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.00
GP2+ M cell, pool1.CNhs13228.11845-124H90.00
GP2+ M cell, pool2.CNhs13231.11846-124I10.00
GP2+ M cell, pool3.CNhs13240.11847-124I20.22
Ileum epithelium, pool1.CNhs13199.10252-104B90.00
Ileum epithelium, pool2.CNhs13232.10253-104C10.00
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.00
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.00
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.00
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.00
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B71.56
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C21.09
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B80.00
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C30.00
Mouse Astrocytes, donor2.CNhs12078.11552-120C40.70
Mouse Astrocytes, donor3.CNhs12107.11633-122C40.00
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.00
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.00
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.00
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.00
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C50.00
Mouse Granule cells, donor1.CNhs12131.11713-123C39.31
Mouse Granule cells, donor2.CNhs12357.11731-123E38.99
Mouse Granule cells, donor3.CNhs12108.11636-122C710.14
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.00
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.00
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.00
Mouse Microglia, donor1.CNhs12629.11718-123C817.38
Mouse Microglia, donor2.CNhs12634.11736-123E810.76
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D56.74
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F56.89
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D96.73
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F129.99
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D526.28
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D26.86
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F24.79
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D64.60
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D338.54
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F337.67
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D735.18
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D45.67
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F46.86
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D85.21
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E422.61
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E530.39
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I637.74
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D625.63
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F623.63
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E111.74
Mouse Schwann, donor1.CNhs12507.11728-123D90.61
Mouse Schwann, donor2.CNhs12573.11746-123F90.53
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G30.00
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.00
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.00
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.00
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.00
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A71.12
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.00
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G60.70
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.00
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B61.48
accessory axillary lymph node, adult.CNhs10475.1063-29H90.00
adrenal gland, adult.CNhs10508.49-24D75.20
adrenal gland, embryo E14.CNhs11038.406-44C51.04
adrenal gland, embryo E16.CNhs11004.1254-43D61.22
adrenal gland, embryo E17.CNhs11043.1263-45I11.15
adrenal gland, embryo E18.CNhs11026.1262-18F51.66
adrenal gland, neonate N00.CNhs11191.1311-23C12.35
adrenal gland, neonate N25.CNhs11223.1377-27I31.13
amnion, adult pregnant day17.5.CNhs10488.583-22A80.00
aorta, adult.CNhs10498.46-23H10.00
bone (os femoris), adult.CNhs10483.56-12G20.00
bone (os femoris), neonate N02.CNhs11227.1985-43F50.00
bone (os femoris), neonate N16.CNhs11225.1525-43A60.00
bone (os femoris), neonate N20.CNhs11195.1350-25C30.00
cecum, adult.CNhs10467.37-13H40.00
cerebellum, adult.CNhs10494.15-8B228.69
cerebellum, neonate N30.CNhs11135.1395-42I250.27
colon, adult.CNhs10468.36-18H70.00
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.00
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.00
corpora quadrigemina, adult.CNhs10501.16-22A442.69
corpus striatum, adult.CNhs10487.19-21D833.86
corpus striatum, neonate N00.CNhs11226.630-43F114.70
cortex, adult.CNhs10473.12-14D564.31
cortex, neonate N30.CNhs11107.1392-42F280.81
diencephalon, adult.CNhs10482.20-12F237.82
diencephalon, neonate N30.CNhs11201.1388-42B259.87
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B10.00
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A20.00
epididymis, adult.CNhs10490.58-23B20.00
eyeball, adult.CNhs10484.31-12G45.89
eyeball, embryo E12.CNhs11016.345-16C60.39
eyeball, embryo E14.CNhs10521.399-16E21.84
eyeball, embryo E15.CNhs10593.426-16C93.24
eyeball, embryo E17.CNhs11023.1261-18D42.71
eyeball, neonate N00.CNhs11207.633-15C63.06
eyeball, neonate N01.CNhs11140.1532-43E74.74
eyeball, neonate N02.CNhs11205.1551-44G84.59
eyeball, neonate N16.CNhs11188.777-19A218.37
forelimb, embryo E11.CNhs10596.335-25E20.00
forelimb, embryo E12.CNhs10600.359-14H20.00
forelimb, embryo E13.CNhs10589.384-1E20.00
forelimb, embryo E14.CNhs10577.413-26A80.22
forelimb, embryo E15.CNhs11007.437-20E70.28
forelimb, embryo E17.CNhs10598.1517-43C40.00
forelimb, embryo E18.CNhs11008.1520-43B50.21
gonad, embryo E13.CNhs11044.1564-45I60.20
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.00
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.00
heart, embryo E11.CNhs10586.331-24E90.00
heart, embryo E12.CNhs11015.353-12F50.00
heart, embryo E13.CNhs11013.376-3I90.00
heart, embryo E14.CNhs10597.403-26D40.00
heart, embryo E15.CNhs11017.431-16C80.00
heart, embryo E16.CNhs11021.457-17C60.00
heart, embryo E17.CNhs11025.479-18E50.00
heart, embryo E18.CNhs11030.1283-20G30.00
heart, neonate N00.CNhs11213.639-21E30.12
heart, neonate N03.CNhs11221.1349-25I20.00
heart, neonate N10.CNhs11118.749-24G10.16
heart, neonate N16.CNhs11209.782-15G10.00
heart, neonate N20.CNhs11127.821-26I60.00
heart, neonate N25.CNhs11196.1351-25D30.00
heart, neonate N30.CNhs11202.1390-42D20.00
hippocampus, adult.CNhs10478.13-16E874.02
hippocampus, neonate N00.CNhs11228.627-43G114.30
intestinal mucosa, adult.CNhs10506.860-29I30.00
intestine, adult.CNhs10496.178-9A30.00
intestine, embryo E12.CNhs11019.1251-16I50.64
intestine, embryo E13.CNhs11010.381-16D52.79
intestine, embryo E15.CNhs10602.976-16D82.19
intestine, embryo E16.CNhs10585.463-22H41.61
intestine, embryo E17.CNhs10582.482-18D31.11
intestine, embryo E18.CNhs10526.1289-20F70.19
intestine, neonate N00.CNhs11126.644-26D10.00
intestine, neonate N01.CNhs11192.1322-23E90.33
intestine, neonate N06.CNhs11102.688-20B80.50
intestine, neonate N07.CNhs11095.720-20F20.40
intestine, neonate N10.CNhs11098.755-23A50.19
intestine, neonate N20.CNhs11187.827-18D10.00
intestine, neonate N25.CNhs11121.1352-25E30.43
intestine, neonate N30.CNhs11131.1384-42G10.40
kidney, embryo E14.CNhs10606.411-4I90.00
kidney, embryo E15.CNhs10997.434-16F80.23
kidney, embryo E16.CNhs10584.464-22A50.00
kidney, embryo E17.CNhs11028.483-18I20.00
kidney, embryo E18.CNhs11001.1288-20C70.00
kidney, neonate N00.CNhs11214.646-21G70.07
kidney, neonate N10.CNhs11206.758-6D50.00
kidney, neonate N20.CNhs11113.832-19I10.00
kidney, neonate N25.CNhs11122.1353-25F30.00
kidney, neonate N30.CNhs11203.1385-42H10.00
liver, adult pregnant day01.CNhs10466.508-5B20.00
liver, embryo E12.CNhs10601.355-15F80.00
liver, embryo E13.CNhs10524.378-3H60.00
liver, embryo E14.CNhs10594.409-16E10.00
liver, embryo E15.CNhs10520.433-16D70.00
liver, embryo E16.CNhs10523.462-17F50.00
liver, embryo E17.CNhs10510.481-18A30.00
liver, embryo E18.CNhs10579.499-43G40.00
liver, neonate N00.CNhs11117.641-24F40.00
liver, neonate N03.CNhs11123.1345-25G20.00
liver, neonate N06.CNhs11101.684-20A80.00
liver, neonate N07.CNhs11103.716-20H20.00
liver, neonate N10.CNhs11115.751-24B90.00
liver, neonate N20.CNhs11220.823-25A30.00
liver, neonate N25.CNhs11198.1368-26H10.00
liver, neonate N30.CNhs11106.1382-42D10.00
lung, adult.CNhs10474.28-22B10.00
lung, embryo E12.CNhs10522.354-16G20.00
lung, embryo E14.CNhs10604.404-26F80.00
lung, embryo E15.CNhs11020.432-17C50.17
lung, embryo E16.CNhs10998.458-17B60.00
lung, embryo E17.CNhs10605.480-44A60.00
lung, embryo E18.CNhs10583.1287-20I60.00
lung, neonate N00.CNhs11224.640-42C60.20
lung, neonate N06.CNhs11212.683-20E50.16
lung, neonate N07.CNhs11111.715-19A30.00
lung, neonate N10.CNhs11219.750-23E60.00
lung, neonate N20.CNhs11109.822-18A40.00
lung, neonate N25.CNhs11119.1359-25C70.00
lung, neonate N30.CNhs11133.1394-42H20.00
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B60.00
mammary gland, adult pregnant day19.CNhs10476.588-5H20.00
medulla oblongata, adult.CNhs10477.17-12C230.99
medulla oblongata, neonate N30.CNhs11200.1396-42A350.05
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.66
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C20.25
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E17.26
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E25.47
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E314.43
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D74.30
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D87.58
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D95.94
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D47.29
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D58.77
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D67.12
olfactory brain, adult.CNhs10489.18-22I935.99
ovary, adult.CNhs10507.91-2I70.14
ovary, embryo E18.CNhs11040.505-44H70.18
ovary, neonate N00.CNhs11217.1299-22I40.00
oviduct, adult pregnant day01.CNhs10500.988-6G60.00
pancreas, adult.CNhs10486.34-16E40.00
pancreas, embryo E14.CNhs11012.405-44F40.49
pancreas, embryo E15.CNhs11042.1556-45F20.91
pancreas, embryo E16.CNhs11003.460-26E51.13
pancreas, embryo E17.CNhs10599.1558-45G30.30
pancreas, embryo E18.CNhs10580.1535-43I72.15
pancreas, neonate N00.CNhs11105.645-26G91.03
pancreas, neonate N01.CNhs11138.1531-43D71.45
pancreas, neonate N02.CNhs11139.1539-43D80.71
pancreas, neonate N16.CNhs11136.787-43B60.95
pancreas, neonate N25.CNhs11094.1555-45E20.00
pancreas, neonate N30.CNhs11182.1548-44H51.03
pituitary gland, adult.CNhs10493.21-1G835.07
pituitary gland, embryo E12.CNhs11018.346-16E60.00
pituitary gland, embryo E13.CNhs11009.370-44C70.13
pituitary gland, embryo E14.CNhs11037.398-44A50.21
pituitary gland, embryo E15.CNhs10592.427-16B92.13
pituitary gland, embryo E16.CNhs11036.449-43F66.96
pituitary gland, embryo E17.CNhs11039.1265-44F55.10
pituitary gland, neonate N00.CNhs11190.1308-22E95.18
placenta, adult pregnant day10.CNhs10472.539-13I70.00
placenta, adult pregnant day17.CNhs10464.577-18G30.00
prostate, adult.CNhs10470.859-1F81.10
skin, adult.CNhs10492.30-1C30.00
skin, neonate N00.CNhs11124.650-25G40.00
skin, neonate N03.CNhs11215.662-22H30.00
skin, neonate N06.CNhs11097.693-20I50.00
skin, neonate N10.CNhs11108.762-6C40.00
small intestine, neonate N16.CNhs11114.790-21I10.00
spinal cord, adult.CNhs10505.24-13C932.08
spleen, adult.CNhs10465.25-2G20.00
spleen, embryo E16.CNhs11035.461-43C10.00
spleen, embryo E18.CNhs11011.1271-21F20.00
spleen, neonate N10.CNhs11116.752-24D10.00
spleen, neonate N20.CNhs11112.824-19H10.00
spleen, neonate N25.CNhs11099.1354-25G30.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.00
stomach, adult.CNhs10503.33-1H60.95
stomach, embryo E12.CNhs10588.356-43E30.47
stomach, embryo E15.CNhs10603.1252-16G81.02
stomach, embryo E16.CNhs11022.459-17D41.51
stomach, embryo E17.CNhs11006.1035-18D50.84
stomach, embryo E18.CNhs10999.1286-20C60.66
stomach, neonate N03.CNhs11193.1340-24B80.81
stomach, neonate N07.CNhs11210.718-18A90.74
stomach, neonate N25.CNhs11104.1355-25E40.26
stomach, neonate N30.CNhs11134.1386-42I10.26
submandibular gland, adult.CNhs10469.59-29C10.00
testis, adult.CNhs10504.57-7G50.00
testis, embryo E13.CNhs11031.389-23F50.00
testis, embryo E15.CNhs11034.443-27C50.00
testis, embryo E16.CNhs11033.470-26G50.00
testis, embryo E17.CNhs11029.486-18I50.00
testis, embryo E18.CNhs11027.503-18G50.00
testis, neonate N00.CNhs11189.1300-22B70.00
testis, neonate N07.CNhs11222.726-26I40.00
testis, neonate N10.CNhs11204.763-44D90.00
testis, neonate N20.CNhs11110.839-18H30.00
testis, neonate N30.CNhs11130.1391-42E20.00
thymus, adult.CNhs10471.38-12B50.00
thymus, embryo E14.CNhs11041.402-44I40.00
thymus, embryo E15.CNhs11005.430-45I20.10
thymus, embryo E16.CNhs11002.456-26C50.13
thymus, embryo E17.CNhs10581.478-18C10.00
thymus, embryo E18.CNhs10595.1273-19G40.00
thymus, neonate N02.CNhs11181.1541-43F80.00
thymus, neonate N03.CNhs11137.2104-43C70.00
thymus, neonate N06.CNhs11197.681-26C40.00
thymus, neonate N07.CNhs11211.713-19D30.00
thymus, neonate N10.CNhs11194.748-24E40.00
thymus, neonate N20.CNhs11186.820-7A20.00
thymus, neonate N25.CNhs11125.1362-25G70.00
thymus, neonate N30.CNhs11132.1393-42G20.00
tongue, adult.CNhs10499.32-1B40.23
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.00
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.00
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.00
urinary bladder, adult.CNhs10481.879-12E40.58
uterus, adult pregnant day19.CNhs10497.590-15F50.00
uterus, adult.CNhs10509.92-27E50.00
vagina, adult.CNhs10502.89-27D50.00
vesicular gland, adult.CNhs10491.51-27F80.00
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A163.25
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A254.78
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A352.71
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D740.90
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A452.75
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A549.86
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A643.88
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A750.89
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A847.13
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A936.24
whole body, embryo E11.CNhs11014.324-5I80.21
whole body, embryo E12.CNhs10587.857-27C91.60
whole body, embryo E13.CNhs10512.372-23H21.20
whole body, embryo E14.5.CNhs10578.420-27D23.65
whole body, embryo E14.CNhs10519.395-14B11.89
whole body, embryo E16.CNhs10514.453-14F22.39
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G53.78
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G53.30
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G53.85
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G53.29
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G55.83
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G53.02
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G52.34
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G53.84
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G52.76
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G52.38
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G54.52
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G53.47
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G53.71
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G53.09
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G52.40
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G53.90
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G52.86
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G53.49
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G53.67
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G53.22
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G54.94
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G53.42
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G53.40
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G52.24
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G53.56
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G52.36
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G53.68
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G52.48
whole body, embryo E17.5.CNhs10513.490-9F92.31
whole body, embryo E17.CNhs10517.475-3I56.50
whole body, embryo E18.CNhs10516.493-3B32.34
whole body, neonate N00.CNhs10525.657-19C23.44
whole body, neonate N01.CNhs10576.659-23C60.77
whole body, neonate N06.CNhs10515.692-21D11.76
whole body, neonate N10.CNhs10518.761-6B41.85





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Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen
neuron9.50e-2033
neuronal stem cell9.50e-2033
neuroblast9.50e-2033
electrically signaling cell9.50e-2033
neural cell2.85e-1643
CNS neuron (sensu Vertebrata)1.22e-1523
neuroblast (sensu Vertebrata)1.22e-1523
ectodermal cell1.38e-1544
neurectodermal cell1.38e-1544
electrically responsive cell9.96e-1539
electrically active cell9.96e-1539

Uber anatomy
Ontology termp-valuen
central nervous system8.46e-4073
nervous system5.32e-3875
neurectoderm8.53e-3464
neural plate8.53e-3464
presumptive neural plate8.53e-3464
ectoderm-derived structure3.94e-3395
ectoderm3.94e-3395
presumptive ectoderm3.94e-3395
regional part of nervous system7.95e-3154
neural tube5.45e-2952
neural rod5.45e-2952
future spinal cord5.45e-2952
neural keel5.45e-2952
ecto-epithelium1.12e-2673
brain3.90e-2547
future brain3.90e-2547
regional part of brain2.71e-2446
pre-chordal neural plate2.94e-2349
gray matter3.79e-2234
structure with developmental contribution from neural crest1.41e-2192
anterior neural tube9.49e-2140
regional part of forebrain6.86e-2039
forebrain6.86e-2039
future forebrain6.86e-2039
brain grey matter1.79e-1829
regional part of telencephalon1.79e-1829
telencephalon1.79e-1829
cerebral cortex3.26e-1321
cerebral hemisphere3.26e-1321
pallium3.26e-1321
regional part of cerebral cortex1.06e-1017
occipital lobe3.41e-1010
visual cortex3.41e-1010
neocortex3.41e-1010
posterior neural tube1.14e-0812
chordal neural plate1.14e-0812
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