FFCP PHASE1:Hg19::chr6:30654342..30654353,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=170954 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=29413 | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=68bp_to_AL832742_5end | |||
|coexpression_cluster_id=C4590 | |||
|description=CAGE_peak_11_at_PPP1R18_5end | |||
|id=chr6:30654342..30654353,- | |||
|ontology_enrichment_celltype=CL:0000222!3.05e-17!119;CL:0002371!3.28e-17!591;CL:0000144!3.28e-15!625;CL:0000055!5.82e-12!180;CL:0000359!3.89e-11!32;CL:0000548!8.10e-11!679;CL:0000004!8.10e-11!679;CL:0000255!8.10e-11!679;CL:0002139!1.74e-10!24;CL:0000115!2.93e-10!35;CL:0000012!3.02e-10!682;CL:0000192!3.09e-10!42;CL:0000514!3.09e-10!42;CL:0000220!7.36e-10!246;CL:0002321!1.61e-09!248;CL:0000071!1.88e-09!18;CL:0002546!1.88e-09!18;CL:0000213!2.06e-09!57;CL:0000215!2.06e-09!57;CL:0002078!8.78e-09!44;CL:0002057!1.15e-08!42;CL:0000183!1.90e-08!59;CL:0000680!2.35e-08!57;CL:0000056!2.35e-08!57;CL:0000355!2.35e-08!57;CL:0000187!6.16e-08!54;CL:0000003!1.15e-07!722;CL:0000723!1.17e-07!436;CL:0000048!1.80e-07!430;CL:0000766!2.70e-07!76;CL:0000860!3.21e-07!45;CL:0000034!9.80e-07!444 | |||
|ontology_enrichment_celltype_v019=CL:0000359;5.79e-12;32!CL:0002139;1.00e-11;24!CL:0000071;6.07e-11;18!CL:0000860;1.11e-10;33!CL:0002057;1.11e-10;33!CL:0000115;1.00e-09;36!CL:0000473;4.41e-09;39!CL:0000234;4.41e-09;39!CL:0000192;1.64e-08;43!CL:1000413;5.41e-07;9 | |||
|ontology_enrichment_celltype_v019_2=CL:0000222,1.38e-14,121;CL:0002139,1.57e-12,24;CL:0000359,5.86e-12,32;CL:0000115,8.98e-12,36;CL:0000071,2.15e-11,18;CL:0002546,2.15e-11,18;CL:0000192,1.51e-10,43;CL:0000514,1.51e-10,43;CL:0002321,2.87e-09,250;CL:0000860,1.12e-08,42;CL:0002057,1.12e-08,42;CL:0000473,1.18e-08,48;CL:0000234,1.18e-08,48;CL:0002078,1.81e-08,45;CL:0000723,3.21e-08,433;CL:0000766,3.88e-08,72;CL:0000680,4.53e-08,58;CL:0000056,4.53e-08,58;CL:0000355,4.53e-08,58;CL:0000048,8.99e-08,427;CL:0000213,9.23e-08,58;CL:0000215,9.23e-08,58;CL:0000187,1.44e-07,55;CL:0000034,3.16e-07,441;CL:0000557,4.63e-07,67;CL:1000413,5.07e-07,9;CL:0002194,6.41e-07,59;CL:0000576,6.41e-07,59;CL:0000040,6.41e-07,59;CL:0000559,6.41e-07,59;CL:0002009,8.41e-07,61 | |||
|ontology_enrichment_development_v019=CL:0002546;6.07e-11;18!CL:0000514;1.64e-08;43!CL:0002057;8.61e-07;42 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000055!1.66e-23!69;UBERON:0003081!5.54e-23!216;UBERON:0001981!1.16e-21!60;UBERON:0007500!1.16e-21!60;UBERON:0004537!1.16e-21!60;UBERON:0006965!1.16e-21!60;UBERON:0002049!3.12e-21!79;UBERON:0007798!3.12e-21!79;UBERON:0004535!6.77e-19!110;UBERON:0004872!4.82e-18!84;UBERON:0001009!6.09e-18!113;UBERON:0001637!9.73e-18!42;UBERON:0003509!9.73e-18!42;UBERON:0004572!9.73e-18!42;UBERON:0004573!1.03e-13!33;UBERON:0004571!1.03e-13!33;UBERON:0003914!4.25e-11!118;UBERON:0002204!4.48e-11!167;UBERON:0000926!2.11e-10!448;UBERON:0004120!2.11e-10!448;UBERON:0006603!2.11e-10!448;UBERON:0000947!1.71e-09!21;UBERON:0010191!1.71e-09!21;UBERON:0001986!1.88e-09!18;UBERON:0004638!1.88e-09!18;UBERON:0004852!1.88e-09!18;UBERON:0000486!2.93e-09!82;UBERON:0004290!4.14e-08!70;UBERON:0000487!5.27e-08!22;UBERON:0000914!1.17e-07!83;UBERON:0002329!1.17e-07!83;UBERON:0003077!1.17e-07!83;UBERON:0003059!1.17e-07!83;UBERON:0007282!1.17e-07!83;UBERON:0009618!1.17e-07!83;UBERON:0007285!1.17e-07!83;UBERON:0000490!1.36e-07!138;UBERON:0006914!1.44e-07!25;UBERON:0001134!1.79e-07!61;UBERON:0002036!1.79e-07!61;UBERON:0003082!1.79e-07!61;UBERON:0002385!9.03e-07!63;UBERON:0001015!9.03e-07!63;UBERON:0000383!9.03e-07!63 | |||
|ontology_enrichment_uberon_v019=UBERON:0001637;2.96e-15;42!UBERON:0003509;2.96e-15;42!UBERON:0004572;2.96e-15;42!UBERON:0007500;1.90e-14;56!UBERON:0001981;1.90e-14;56!UBERON:0004537;1.90e-14;56!UBERON:0004573;4.28e-14;33!UBERON:0004571;4.28e-14;33!UBERON:0000055;3.80e-13;65!UBERON:0004638;6.07e-11;18!UBERON:0001986;6.07e-11;18!UBERON:0004852;6.07e-11;18!UBERON:0002049;1.60e-10;75!UBERON:0007798;1.60e-10;75!UBERON:0000947;2.92e-10;21!UBERON:0010191;2.92e-10;21!UBERON:0000487;6.73e-09;22!UBERON:0003914;1.27e-08;74!UBERON:0000490;3.97e-08;33!UBERON:0006914;1.14e-07;25!UBERON:0003915;5.41e-07;9!UBERON:0004700;5.41e-07;9!UBERON:0001917;5.41e-07;9 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000055,3.70e-27,68;UBERON:0007500,3.91e-25,59;UBERON:0001981,3.91e-25,59;UBERON:0004537,3.91e-25,59;UBERON:0006965,3.91e-25,59;UBERON:0003081,1.25e-23,203;UBERON:0002049,5.34e-23,78;UBERON:0007798,5.34e-23,78;UBERON:0004872,1.99e-21,83;UBERON:0004535,7.02e-21,109;UBERON:0001637,1.84e-20,42;UBERON:0003509,1.84e-20,42;UBERON:0004572,1.84e-20,42;UBERON:0001009,4.47e-20,112;UBERON:0000926,6.10e-18,315;UBERON:0004120,6.10e-18,315;UBERON:0006603,6.10e-18,315;UBERON:0004573,1.77e-15,33;UBERON:0004571,1.77e-15,33;UBERON:0003914,1.33e-12,117;UBERON:0004638,2.15e-11,18;UBERON:0001986,2.15e-11,18;UBERON:0004852,2.15e-11,18;UBERON:0000947,1.02e-10,21;UBERON:0010191,1.02e-10,21;UBERON:0002204,1.22e-09,167;UBERON:0000490,2.98e-09,148;UBERON:0000487,3.09e-09,22;UBERON:0000486,5.35e-09,83;UBERON:0006914,4.45e-08,25;UBERON:0007503,4.97e-08,78;UBERON:0002329,8.89e-08,71;UBERON:0003059,8.89e-08,71;UBERON:0007282,8.89e-08,71;UBERON:0004290,8.89e-08,71;UBERON:0009618,8.89e-08,71;UBERON:0007524,1.05e-07,73;UBERON:0003077,1.78e-07,72;UBERON:0007285,1.78e-07,72;UBERON:0001134,3.91e-07,62;UBERON:0002036,3.91e-07,62;UBERON:0003082,3.91e-07,62;UBERON:0003915,5.07e-07,9;UBERON:0004700,5.07e-07,9;UBERON:0001917,5.07e-07,9;UBERON:0002405,8.86e-07,93 | |||
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| |||
|short_description=p11@PPP1R18 | |||
}} |
Revision as of 10:51, 22 January 2014
Short description: | p11@PPP1R18 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_11_at_PPP1R18_5end |
Coexpression cluster: | C4590_Neutrophils_Eosinophils_Whole_embryonic_osteosarcoma_Fibroblast_CD14 |
Association with transcript: | 68bp_to_AL832742_5end |
EntrezGene: | PPP1R18 |
HGNC: | 29413 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mesodermal cell | 1.38e-14 | 121 |
endothelial cell of vascular tree | 1.57e-12 | 24 |
vascular associated smooth muscle cell | 5.86e-12 | 32 |
endothelial cell | 8.98e-12 | 36 |
blood vessel endothelial cell | 2.15e-11 | 18 |
embryonic blood vessel endothelial progenitor cell | 2.15e-11 | 18 |
smooth muscle cell | 1.51e-10 | 43 |
smooth muscle myoblast | 1.51e-10 | 43 |
embryonic cell | 2.87e-09 | 250 |
classical monocyte | 1.12e-08 | 42 |
CD14-positive, CD16-negative classical monocyte | 1.12e-08 | 42 |
defensive cell | 1.18e-08 | 48 |
phagocyte | 1.18e-08 | 48 |
meso-epithelial cell | 1.81e-08 | 45 |
somatic stem cell | 3.21e-08 | 433 |
myeloid leukocyte | 3.88e-08 | 72 |
muscle precursor cell | 4.53e-08 | 58 |
myoblast | 4.53e-08 | 58 |
multi-potent skeletal muscle stem cell | 4.53e-08 | 58 |
multi fate stem cell | 8.99e-08 | 427 |
lining cell | 9.23e-08 | 58 |
barrier cell | 9.23e-08 | 58 |
muscle cell | 1.44e-07 | 55 |
stem cell | 3.16e-07 | 441 |
granulocyte monocyte progenitor cell | 4.63e-07 | 67 |
endothelial cell of artery | 5.07e-07 | 9 |
monopoietic cell | 6.41e-07 | 59 |
monocyte | 6.41e-07 | 59 |
monoblast | 6.41e-07 | 59 |
promonocyte | 6.41e-07 | 59 |
macrophage dendritic cell progenitor | 8.41e-07 | 61 |