FFCP PHASE1:Mm9::chr1:34906782..34906792,+: Difference between revisions
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{{FFCP|EntrezGene=226971|HGNC=|MCL_coexpression_id=240|UniProt=Q9QZC7,Q3UFC9|association_with_transcript=-11bp_to_ENSMUST00000115060,NM_145516,NM_175421,uc007apk.1,uc007apl.1_5end|description=CAGE_peak_2_at_Plekhb2_5end|id=chr1:34906782..34906792,+|ontology_enrichment_celltype=CL:0000117!1.16e-07!23;CL:0000337!1.16e-07!23|ontology_enrichment_celltype_v019_2=CL:0000117,8.17e-08,23;CL:0000337,8.17e-08,23|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001049!1.42e-17!52;UBERON:0005068!1.42e-17!52;UBERON:0006241!1.42e-17!52;UBERON:0007135!1.42e-17!52;UBERON:0000955!8.46e-17!50;UBERON:0006238!8.46e-17!50;UBERON:0001017!1.07e-16!73;UBERON:0005743!1.07e-16!73;UBERON:0000073!2.50e-16!75;UBERON:0001016!2.50e-16!75;UBERON:0002616!2.90e-16!49;UBERON:0002020!5.03e-15!34;UBERON:0000033!1.45e-13!63;UBERON:0002791!1.08e-12!29;UBERON:0003528!1.08e-12!29;UBERON:0001893!1.08e-12!29;UBERON:0003080!2.77e-12!40;UBERON:0002780!1.07e-11!39;UBERON:0001890!1.07e-11!39;UBERON:0006240!1.07e-11!39;UBERON:0002346!1.65e-11!71;UBERON:0003075!1.65e-11!71;UBERON:0007284!1.65e-11!71;UBERON:0004121!1.89e-11!102;UBERON:0000924!1.89e-11!102;UBERON:0006601!1.89e-11!102;UBERON:0007811!1.26e-10!86;UBERON:0000064!1.29e-10!99;UBERON:0003056!4.14e-10!49;UBERON:0000956!1.69e-09!21;UBERON:0001869!1.69e-09!21;UBERON:0000203!1.69e-09!21;UBERON:0002619!1.78e-08!17;UBERON:0000153!4.39e-08!94;UBERON:0002021!9.47e-08!10;UBERON:0000411!9.47e-08!10;UBERON:0001950!9.47e-08!10;UBERON:0007023!1.05e-07!51|ontology_enrichment_uberon_v019_2=UBERON:0000073,7.50e-19,54;UBERON:0001049,1.19e-17,52;UBERON:0005068,1.19e-17,52;UBERON:0006241,1.19e-17,52;UBERON:0007135,1.19e-17,52;UBERON:0001017,8.45e-17,73;UBERON:0001016,2.00e-16,75;UBERON:0002020,1.05e-15,34;UBERON:0000955,5.26e-15,47;UBERON:0006238,5.26e-15,47;UBERON:0002616,1.88e-14,46;UBERON:0002346,3.31e-13,64;UBERON:0003075,3.31e-13,64;UBERON:0007284,3.31e-13,64;UBERON:0003528,3.44e-13,29;UBERON:0002791,3.44e-13,29;UBERON:0001893,3.44e-13,29;UBERON:0004121,1.62e-12,95;UBERON:0000924,1.62e-12,95;UBERON:0006601,1.62e-12,95;UBERON:0003080,5.00e-12,40;UBERON:0002780,2.08e-11,39;UBERON:0001890,2.08e-11,39;UBERON:0006240,2.08e-11,39;UBERON:0010371,2.62e-10,73;UBERON:0011216,4.95e-10,194;UBERON:0000956,9.75e-10,21;UBERON:0001869,9.75e-10,21;UBERON:0000203,9.75e-10,21;UBERON:0010314,9.89e-10,92;UBERON:0003056,1.74e-09,49;UBERON:0002619,1.29e-08,17;UBERON:0002021,2.88e-08,10;UBERON:0000411,2.88e-08,10;UBERON:0001950,2.88e-08,10;UBERON:0007023,4.98e-08,51;UBERON:0000160,6.43e-08,31|phase1_expression=0.480446541314382,9.07336059862339,6.3699893514535,9.0739263392049,5.00895729946347,4.19698179779725,3.03696432774183,2.32421982194837,1.40788722151667,4.21316147379588,2.22583358693156,0.8774937489487,1.88320802924326,1.04904482902797,0,0.607425802169478,0,0.788655413395594,1.91960207048034,2.54633791078818,3.48677489619386,0.0992909512008853,0,3.83981814704176,4.5881856213434,6.89078356938024,6.03066794622705,4.95583835177545,5.32065574477847,4.03248207615889,3.32595765982957,0,0,0,1.1554064790051,1.49611180822643,1.02084678131185,0.418531630736908,0.7813353445238,0,0.588231488031014,1.36609096991689,1.45653105909346,2.26614272356039,1.82478476195126,1.46837401729345,1.56478268869608,2.61630187656536,2.19686182734472,3.11087838518853,3.21968769738334,5.75010257459886,0.838913030288682,0.725362142011344,2.35265659399725,1.28629718017973,0.286533439938757,2.57836046138721,1.61853168687678,4.23192783417626,1.26766280701236,1.35537812827653,0.889294796111139,3.1496490104849,8.89979726310277,0.7104801149461,1.79760066311043,4.61061966385865,2.28117147078651,2.97013064329719,2.52389953621658,12.2829923293636,13.9147180799517,2.81728838194394,2.87536413054709,0.919218786610021,9.91042928994498,9.70423769447427,10.4452442614246,2.63772575460388,2.28719109006024,2.08365348222704,7.2587579740359,11.2552522006336,12.9878510610289,4.71405736757868,9.39653093274079,2.23679334990361,1.06016670666458,1.20914496170857,0.289864488701678,2.58127163094416,0,0.539703191637817,0,0.896053774194671,1.26399978118577,0.511290967734173,0,0,1.40843419776681,0,0,7.11066703153331,1.08245520505607,0.506719730950197,2.52762222507392,1.59857431606684,1.29468941823586,2.07818994690755,0.173485326766136,0.913396434936424,0.922461989024234,0.904335843315735,0.352766121407114,1.88499886994513,2.96633961281249,1.59059292611903,0,0.161766849947409,0,0,3.72783522436244,7.90508151931177,6.0739544975902,4.34276993854605,0.239630249011841,0,0.254140454146129,12.5824137100051,19.2150253183823,6.78533501409468,11.4724051326902,13.5529192385075,14.5451631191692,11.0324058886075,0.611036183101898,0.497627882440372,3.28539585963777,3.36706969418358,0.260240885925407,0.689706313300419,0.720248519221397,0.60281927134286,0.748401490664606,1.40925092313335,1.40552586839593,5.69147415625834,0.431135985865684,0.189106080167819,0.175951124163949,0.657587197282725,0,1.0447564995665,0.823128545631774,0.59710280045548,0,0,0.28416349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| {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=entrezgene:226971 | |||
|HGNC= | |||
|MCL_coexpression_id=240 | |||
|TSSclassifier=NA | |||
|UniProt=uniprot:Q9QZC7,uniprot:Q3UFC9 | |||
|association_with_transcript=-11bp_to_ENSMUST00000115060,NM_145516,NM_175421,uc007apk.1,uc007apl.1_5end | |||
|cluster_id=chr1:34906782..34906792,+ | |||
|description=CAGE_peak_2_at_Plekhb2_5end | |||
|id=chr1:34906782..34906792,+ | |||
|ontology_enrichment_celltype=CL:0000117!1.16e-07!23;CL:0000337!1.16e-07!23 | |||
|ontology_enrichment_celltype_v019_2=CL:0000117,8.17e-08,23;CL:0000337,8.17e-08,23 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!1.42e-17!52;UBERON:0005068!1.42e-17!52;UBERON:0006241!1.42e-17!52;UBERON:0007135!1.42e-17!52;UBERON:0000955!8.46e-17!50;UBERON:0006238!8.46e-17!50;UBERON:0001017!1.07e-16!73;UBERON:0005743!1.07e-16!73;UBERON:0000073!2.50e-16!75;UBERON:0001016!2.50e-16!75;UBERON:0002616!2.90e-16!49;UBERON:0002020!5.03e-15!34;UBERON:0000033!1.45e-13!63;UBERON:0002791!1.08e-12!29;UBERON:0003528!1.08e-12!29;UBERON:0001893!1.08e-12!29;UBERON:0003080!2.77e-12!40;UBERON:0002780!1.07e-11!39;UBERON:0001890!1.07e-11!39;UBERON:0006240!1.07e-11!39;UBERON:0002346!1.65e-11!71;UBERON:0003075!1.65e-11!71;UBERON:0007284!1.65e-11!71;UBERON:0004121!1.89e-11!102;UBERON:0000924!1.89e-11!102;UBERON:0006601!1.89e-11!102;UBERON:0007811!1.26e-10!86;UBERON:0000064!1.29e-10!99;UBERON:0003056!4.14e-10!49;UBERON:0000956!1.69e-09!21;UBERON:0001869!1.69e-09!21;UBERON:0000203!1.69e-09!21;UBERON:0002619!1.78e-08!17;UBERON:0000153!4.39e-08!94;UBERON:0002021!9.47e-08!10;UBERON:0000411!9.47e-08!10;UBERON:0001950!9.47e-08!10;UBERON:0007023!1.05e-07!51 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000073,7.50e-19,54;UBERON:0001049,1.19e-17,52;UBERON:0005068,1.19e-17,52;UBERON:0006241,1.19e-17,52;UBERON:0007135,1.19e-17,52;UBERON:0001017,8.45e-17,73;UBERON:0001016,2.00e-16,75;UBERON:0002020,1.05e-15,34;UBERON:0000955,5.26e-15,47;UBERON:0006238,5.26e-15,47;UBERON:0002616,1.88e-14,46;UBERON:0002346,3.31e-13,64;UBERON:0003075,3.31e-13,64;UBERON:0007284,3.31e-13,64;UBERON:0003528,3.44e-13,29;UBERON:0002791,3.44e-13,29;UBERON:0001893,3.44e-13,29;UBERON:0004121,1.62e-12,95;UBERON:0000924,1.62e-12,95;UBERON:0006601,1.62e-12,95;UBERON:0003080,5.00e-12,40;UBERON:0002780,2.08e-11,39;UBERON:0001890,2.08e-11,39;UBERON:0006240,2.08e-11,39;UBERON:0010371,2.62e-10,73;UBERON:0011216,4.95e-10,194;UBERON:0000956,9.75e-10,21;UBERON:0001869,9.75e-10,21;UBERON:0000203,9.75e-10,21;UBERON:0010314,9.89e-10,92;UBERON:0003056,1.74e-09,49;UBERON:0002619,1.29e-08,17;UBERON:0002021,2.88e-08,10;UBERON:0000411,2.88e-08,10;UBERON:0001950,2.88e-08,10;UBERON:0007023,4.98e-08,51;UBERON:0000160,6.43e-08,31 | |||
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| |||
|short_description=p2@Plekhb2 | |||
}} |
Revision as of 14:26, 5 August 2015
Short description: | p2@Plekhb2 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_Plekhb2_5end |
Coexpression cluster: | MCL_coexpression_mm9:240 |
Association with transcript: | -11bp_to_ENSMUST00000115060, NM_145516, NM_175421, uc007apk.1, uc007apl.1_5end |
EntrezGene: | 226971 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 8.17e-08 | 23 |
neuroblast (sensu Vertebrata) | 8.17e-08 | 23 |