FFCP PHASE1:Hg19::chr7:27157834..27157879,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=not | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C4678 | |||
|description=CAGE_peak_at_chr7:27157834..27157879,- | |||
|id=chr7:27157834..27157879,- | |||
|ontology_enrichment_celltype=CL:0000192!1.53e-14!42;CL:0000514!1.53e-14!42;CL:0000183!2.74e-14!59;CL:1000507!8.40e-14!12;CL:1000494!8.40e-14!12;CL:1000497!2.97e-13!18;CL:0002518!2.97e-13!18;CL:1000449!3.27e-13!16;CL:0000222!5.03e-13!119;CL:0000187!3.88e-12!54;CL:0000680!8.62e-12!57;CL:0000056!8.62e-12!57;CL:0000355!8.62e-12!57;CL:0000393!9.67e-11!60;CL:0000211!9.67e-11!60;CL:0002681!6.54e-10!13;CL:0002584!6.54e-10!13;CL:0000359!1.25e-09!32;CL:0002334!3.04e-09!12;CL:0002539!3.20e-08!10 | |||
|ontology_enrichment_celltype_v019=CL:1000507;3.49e-16;10!CL:1000494;3.49e-16;10!CL:1000497;1.26e-15;17!CL:0002518;1.26e-15;17!CL:1000449;5.03e-15;15!CL:0002539;3.70e-13;10!CL:0000192;9.92e-13;43!CL:0000359;1.49e-11;32!CL:0002681;4.90e-10;12!CL:0002584;4.90e-10;12!CL:0000187;8.10e-08;55 | |||
|ontology_enrichment_celltype_v019_2=CL:0000192,2.11e-16,43;CL:0000514,2.11e-16,43;CL:1000507,2.58e-16,10;CL:1000494,2.58e-16,10;CL:1000497,1.14e-15,17;CL:0002518,1.14e-15,17;CL:1000449,4.30e-15,15;CL:0000187,5.12e-14,55;CL:0002539,3.35e-13,10;CL:0000680,5.82e-13,58;CL:0000056,5.82e-13,58;CL:0000355,5.82e-13,58;CL:0000393,5.15e-12,61;CL:0000211,5.15e-12,61;CL:0000359,1.54e-11,32;CL:0000222,1.91e-11,121;CL:0002681,4.96e-10,12;CL:0002584,4.96e-10,12 | |||
|ontology_enrichment_development_v019=CL:0000514;9.92e-13;43!CL:0000355;3.70e-07;58 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:2394;3.58e-08;14 | |||
|ontology_enrichment_disease_v019_2=DOID:2394,3.47e-08,14 | |||
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|ontology_enrichment_uberon_v019=UBERON:0004211;3.49e-16;10!UBERON:0009773;3.49e-16;10!UBERON:0001231;3.49e-16;10!UBERON:0004810;3.49e-16;10!UBERON:0006555;5.03e-15;15!UBERON:0004819;5.03e-15;15!UBERON:0001285;5.03e-15;15!UBERON:0007684;5.03e-15;15!UBERON:0004237;3.70e-13;10!UBERON:0004695;3.70e-13;10!UBERON:0002111;3.70e-13;10!UBERON:0004178;3.70e-13;10!UBERON:0004573;4.04e-12;33!UBERON:0004571;4.04e-12;33!UBERON:0002113;6.57e-12;24!UBERON:0011143;6.57e-12;24!UBERON:0001135;3.61e-10;15!UBERON:0000947;4.62e-10;21!UBERON:0010191;4.62e-10;21!UBERON:0001225;4.90e-10;12!UBERON:0008987;4.90e-10;12!UBERON:0001851;1.32e-09;15!UBERON:0000489;2.69e-09;29!UBERON:0003914;2.96e-09;74!UBERON:0006554;6.98e-09;30!UBERON:0001008;6.98e-09;30!UBERON:0000353;1.02e-07;15!UBERON:0002417;1.07e-07;58!UBERON:0000916;1.07e-07;58!UBERON:0005172;1.74e-07;52!UBERON:0005173;1.74e-07;52!UBERON:0002108;6.47e-07;4 | |||
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|phase1_expression=0.726713517082227,0,1.83240725324762,0,0.893922188854576,3.48935409640147,0,0,0,6.14334841253772,0,0,0,0.37129905888014,0.331397375727916,2.6893005858071,2.41077811209591,6.57279081348636,3.41552959153355,1.10808952269109,1.42800483870977,0.626909442956176,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.34140171940727,0,0,0,0,0,0,0,0,0,0.72038491523742,0,0,0,0,0,0,0,0,0.198762407366705,0,0,0.56530794192401,0.419499436209906,0.275118041940067,0,0.258416759169329,0,0,0,0,0.24406205754817,0,0,0.446498641420399,0.44905874525234,0.112611480483322,1.53316637465883,1.89853131913626,0,0,0,0,0,0,0,1.72101972449288,2.12801029319014,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.910161361938026,0,0,0,0,0,0,0,0.340296549480063,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.2925920906512,10.2906097969879,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.190254152234598,0,0,0,0,0,0,0,0,0.0895585227028483,0,1.91691339582606,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.129271715757778,0,0,0,0,0,1.41849132023278,0,3.43147184779554,0,0,0,2.48774364119782,0,6.63166629531089,9.58686804460323,17.1953544833138,0,0,0,0,0,0,0.144781306667579,0,0,0,0,0,0,0,0,0,0.167516265334349,0,0,0,0,0.24538298343828,0.500170521059677,1.35632511849868,0,0,0,0,0,0,0,0,0,0,0.195801157462741,0,0,0,0,0,0,0,0.744323423456331,0.153461973288062,0,4.61300937320523,0.511707249066704,6.27330292460069,2.96836132889982,0.154209693802656,0.710246901252508,0.410635780069046,3.63478100428535,0.697262270759755,0,0,0,0,0,0,1.80479845162965,2.46449078734127,7.0591479225917,2.92278449306521,3.69430701125065,0,0.170093705276516,1.51141141271498,3.08454505380579,4.6060894382455,7.5253466078228,3.56826782263054,0.831076008928724,3.1342465661105,0,0,0,0,0,0.103041011647722,0,0,0,0,0,0,0.154048617114644,1.22802939780904,0,0,0,0,0,0,0,0,0,6.04299214086472,3.77774816196768,4.8792608911242,0,0,6.08953094452551,0.74129687641568,0.286249773483982,0,0.316379424718726,1.14378116354295,3.32667128704734,2.1396949401696,1.90921948755562,4.70969184119538,0.179872457583315,0.823611089208164,0.589062011728432,0,0,0,4.8763373908959,4.87426979262569,15.8475220135133,0,1.55545975149084,1.13008116620243,23.7087097724833,0,0.438450885253763,2.89387767133344,6.55894752046633,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.470719003883896,0,0,0,0.459446800413919,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.39858678932185,0,0,0,0,0,0,0,0.63337622438398,2.39097585901284,0.276283915531148,0,0,0,0,0,0,0,0.197286811273867,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.153900517007594,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.210998064528027,1.46909527343233,0,0,0,0.973033209536731,0,0,0,0,0,1.60515529459758,0,0,0,0,0,2.41981432097328,0,0,0,0,0,0,0,0,2.56148591426813,0,0.694238953340524,0,0,1.04836000945218,0,0,0,0,1.16386819786103,0,0,0,0,0,0,0.320635281006135,1.28071796843612,0,0,3.43609788497747,0,0,1.61528296235062,0,0,0,0,12.7138259556668,0,0,0,0,0,0,0.229160424011684,0,0,0,0,0.470284307407084,0.720599767084807,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.630445658393585,1.15400093896996,0,0,0,0.714695326373367,0,0,0,0,0,0,0,7.8378490021294,0.679872549120754,0,0,0.904980694530854,0,0,0,0.427149650270779,2.98688179689365,0,0.496166021811951,0,0,0,0,0,0,0,0,0,0,0,1.14681839138014,1.77486482458964,1.92498849118289,0,0,0,0,0,0,0,0.895528817321244,2.10341978862502,0,0,0,0,0.457680136793847,0.453692771289717,4.50767881690063,1.18284119991707,0,0,3.26052209440145,1.24411862352257,2.65841714557995,1.5652351854352,9.31597175782754,1.90402606084398,2.44122439922797,0,7.4113284359317,0,0,0,0,0.673498977531838,0,0,1.28664954824955,0,0,5.09349443512435,0,0,0,1.31570429747224,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.918736432059601,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.1058891937792,0,0,0,0,3.40068998299204,0,0,0,0.0634158101939068,0,0,0,0,0,0,0,0,0,0,0,0,3.19457744991109,0,0,0,0,0,0,1.82631744101899,4.10262423315381,0,0,0,0,0,0.801711364730253,0,0,0,0,0,0,0.423387050190929,0,0,0,0,0,0,0,0,0,0,0,0,0.237840181555137,0,0,0,1.31196068783506,2.84127428655144,0,0.735444965261716,0,0.981542335574726,0.891139200981258,0.4226557275834,0,0.0939839179798536,0.257831551894309,0,0,0,0,2.92134555298607,0,0,0,0,0,5.81929524566941,0,0,0,0,0,0,0,0,0.36757959813938,0,0.227336094654718,0.267964130156178,0,0,1.91910583710883,1.90451545170992,0.129177819672012,0.931120714437869,0,0.318235791390825,1.0105859447911,0,0,0,0.573777643141411,2.66128285236811,0,0,0,0,0,0.611207220914332,0,0.665756774185513,0.603821380773079,0 | |||
|short_description=p@chr7:27157834..27157879,- | |||
}} |
Revision as of 16:11, 22 January 2014
Short description: | p@chr7:27157834..27157879, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr7:27157834..27157879, - |
Coexpression cluster: | C4678_Smooth_Mesothelial_glioma_mesenchymal_Renal_liposarcoma_Hepatic |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
smooth muscle cell | 2.11e-16 | 43 |
smooth muscle myoblast | 2.11e-16 | 43 |
kidney tubule cell | 2.58e-16 | 10 |
nephron tubule epithelial cell | 2.58e-16 | 10 |
kidney cell | 1.14e-15 | 17 |
kidney epithelial cell | 1.14e-15 | 17 |
epithelial cell of nephron | 4.30e-15 | 15 |
muscle cell | 5.12e-14 | 55 |
aortic smooth muscle cell | 3.35e-13 | 10 |
muscle precursor cell | 5.82e-13 | 58 |
myoblast | 5.82e-13 | 58 |
multi-potent skeletal muscle stem cell | 5.82e-13 | 58 |
electrically responsive cell | 5.15e-12 | 61 |
electrically active cell | 5.15e-12 | 61 |
vascular associated smooth muscle cell | 1.54e-11 | 32 |
mesodermal cell | 1.91e-11 | 121 |
kidney cortical cell | 4.96e-10 | 12 |
renal cortical epithelial cell | 4.96e-10 | 12 |
Ontology term | p-value | n |
---|---|---|
ovarian cancer | 3.47e-08 | 14 |