FFCP PHASE1:Mm9::chr3:84109307..84109378,-: Difference between revisions
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{{FFCP|EntrezGene=80890|HGNC=|MCL_coexpression_id=3418|UniProt=D3YZJ0,D3YY69|association_with_transcript=0bp_to_ENSMUST00000122849,ENSMUST00000132283_5end|description=CAGE_peak_7_at_Trim2_5end|id=chr3:84109307..84109378,-|ontology_enrichment_celltype=CL:0000221!3.15e-15!44;CL:0000133!3.15e-15!44;CL:0000117!3.50e-15!23;CL:0000337!3.50e-15!23;CL:0000540!4.55e-15!33;CL:0000047!4.55e-15!33;CL:0000031!4.55e-15!33;CL:0000404!4.55e-15!33;CL:0002319!6.37e-15!43;CL:0000393!1.10e-09!39;CL:0000211!1.10e-09!39;CL:0000055!1.29e-09!50|ontology_enrichment_celltype_v019_2=CL:0000117,1.65e-18,23;CL:0000337,1.65e-18,23;CL:0000221,5.53e-18,44;CL:0000133,5.53e-18,44;CL:0000540,6.99e-18,33;CL:0000047,6.99e-18,33;CL:0000031,6.99e-18,33;CL:0000404,6.99e-18,33;CL:0002319,1.33e-17,43;CL:0000393,4.66e-13,39;CL:0000211,4.66e-13,39|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001017!9.24e-27!73;UBERON:0005743!9.24e-27!73;UBERON:0000073!7.13e-26!75;UBERON:0001016!7.13e-26!75;UBERON:0004121!4.15e-22!102;UBERON:0000924!4.15e-22!102;UBERON:0006601!4.15e-22!102;UBERON:0002346!5.12e-21!71;UBERON:0003075!5.12e-21!71;UBERON:0007284!5.12e-21!71;UBERON:0001049!4.10e-20!52;UBERON:0005068!4.10e-20!52;UBERON:0006241!4.10e-20!52;UBERON:0007135!4.10e-20!52;UBERON:0000955!2.46e-19!50;UBERON:0006238!2.46e-19!50;UBERON:0000033!2.64e-19!63;UBERON:0002616!1.27e-18!49;UBERON:0003056!1.01e-17!49;UBERON:0003080!1.53e-16!40;UBERON:0002020!2.93e-16!34;UBERON:0002780!6.13e-16!39;UBERON:0001890!6.13e-16!39;UBERON:0006240!6.13e-16!39;UBERON:0002791!8.83e-14!29;UBERON:0003528!8.83e-14!29;UBERON:0001893!8.83e-14!29;UBERON:0000956!7.36e-09!21;UBERON:0001869!7.36e-09!21;UBERON:0000203!7.36e-09!21;UBERON:0007811!1.37e-08!86;UBERON:0000468!6.62e-08!333;UBERON:0000153!4.85e-07!94|ontology_enrichment_uberon_v019_2=UBERON:0001017,4.02e-32,73;UBERON:0001016,1.65e-30,75;UBERON:0002346,9.16e-27,64;UBERON:0003075,9.16e-27,64;UBERON:0007284,9.16e-27,64;UBERON:0004121,1.27e-26,95;UBERON:0000924,1.27e-26,95;UBERON:0006601,1.27e-26,95;UBERON:0000073,9.73e-26,54;UBERON:0001049,2.58e-24,52;UBERON:0005068,2.58e-24,52;UBERON:0006241,2.58e-24,52;UBERON:0007135,2.58e-24,52;UBERON:0010371,2.55e-22,73;UBERON:0003056,8.51e-22,49;UBERON:0000955,2.95e-21,47;UBERON:0006238,2.95e-21,47;UBERON:0002616,2.17e-20,46;UBERON:0003080,3.34e-20,40;UBERON:0002020,7.48e-20,34;UBERON:0002780,1.88e-19,39;UBERON:0001890,1.88e-19,39;UBERON:0006240,1.88e-19,39;UBERON:0003528,9.16e-17,29;UBERON:0002791,9.16e-17,29;UBERON:0001893,9.16e-17,29;UBERON:0010314,5.34e-13,92;UBERON:0000956,1.21e-10,21;UBERON:0001869,1.21e-10,21;UBERON:0000203,1.21e-10,21;UBERON:0000025,6.74e-08,114;UBERON:0002619,1.24e-07,17;UBERON:0002420,1.29e-07,8;UBERON:0007245,1.29e-07,8;UBERON:0010009,1.29e-07,8;UBERON:0010011,1.29e-07,8;UBERON:0000454,1.29e-07,8;UBERON:0004111,2.72e-07,122|phase1_expression=1.60148847104794,1.04692622291808,0.909998478779072,0.90739263392049,0.500895729946347,0.33575854382378,0,0,0,0,0,0,0,0,0,0,0,0.157731082679119,0.137114433605739,0.42438965179803,3.31668831589172,0,0,0.319984845586813,0,0,0,0.646413698057667,0.380046838912748,0.756090389279792,0.443461021310609,0,0,0,0.577703239502549,0,0.408338712524738,0,0,0,0,0,0,0,0,0,0,6.97680500417429,2.63623419281366,4.27745777963423,2.51975558925653,4.31257693094915,0,0,0,0,0,0,14.566785181891,9.52183762689659,13.3104594736298,0,0,0,0,0,1.19840044207362,3.45796474789399,21.8785081970888,18.6308194897733,21.2428210964896,4.28476476605705,3.53389665522582,17.1487118900936,14.3768206527355,23.8996884518605,7.70811166995721,5.10749352340751,6.60508093001847,12.7929699098288,13.631658896759,11.4600941522487,6.70039197603314,11.2552522006336,10.6958773443767,9.72274332063103,9.25415925194169,9.50637173709033,0.227178579999552,0.226714680320357,0.579728977403356,0,0,0,0,0,1.12355536105401,0,0,0,3.80277233397037,0,0,0,0,0,0.505524445014783,0.79928715803342,0,0.445326417194474,0.867426633830679,0.913396434936424,0.922461989024234,0.60289056221049,0.823120949949934,0.251333182659351,0,0.722996784599558,0,0,0,0,0,2.04946557908083,0.83778682725382,0.255457055208591,0,0,0,7.63932260964596,7.32000964509802,19.2251158732683,5.9100268865374,4.09144731728529,6.02585329222724,7.30085683804909,0.509196819251581,0.746441823660558,1.51633655060205,0.210441855886474,3.25301107406759,5.28774840196988,5.40186389416048,4.21973489940002,5.71506592871154,3.20284300712124,3.5606655332697,0,0.215567992932842,1.13463648100692,0,0.219195732427575,0.278047249225598,0.348252166522167,0,0.796137067273973,0,0,0,0.207125772535502,0,0,0.23674473558521,0.196764231747404,0.154267112887378,0.232533944750408,0.268273401399619,0,0,0.164167464079095,0.162137619091711,0,0,0.134206418760372,7.57043814830858,13.9950272835827,0.660837565967596,0.793351699990633,0,0.464473343720877,0.902072229254653,1.00841762311671,2.00140239460383,1.52180500890047,1.42358718463353,0.329397909448022,0.502670417600539,1.59165177632921,1.75467678407208,0,0.864552199498777,0.7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| {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=entrezgene:80890 | |||
|HGNC= | |||
|MCL_coexpression_id=3418 | |||
|TSSclassifier=NA | |||
|UniProt=uniprot:D3YZJ0,uniprot:D3YY69 | |||
|association_with_transcript=0bp_to_ENSMUST00000122849,ENSMUST00000132283_5end | |||
|cluster_id=chr3:84109307..84109378,- | |||
|description=CAGE_peak_7_at_Trim2_5end | |||
|id=chr3:84109307..84109378,- | |||
|ontology_enrichment_celltype=CL:0000221!3.15e-15!44;CL:0000133!3.15e-15!44;CL:0000117!3.50e-15!23;CL:0000337!3.50e-15!23;CL:0000540!4.55e-15!33;CL:0000047!4.55e-15!33;CL:0000031!4.55e-15!33;CL:0000404!4.55e-15!33;CL:0002319!6.37e-15!43;CL:0000393!1.10e-09!39;CL:0000211!1.10e-09!39;CL:0000055!1.29e-09!50 | |||
|ontology_enrichment_celltype_v019_2=CL:0000117,1.65e-18,23;CL:0000337,1.65e-18,23;CL:0000221,5.53e-18,44;CL:0000133,5.53e-18,44;CL:0000540,6.99e-18,33;CL:0000047,6.99e-18,33;CL:0000031,6.99e-18,33;CL:0000404,6.99e-18,33;CL:0002319,1.33e-17,43;CL:0000393,4.66e-13,39;CL:0000211,4.66e-13,39 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!9.24e-27!73;UBERON:0005743!9.24e-27!73;UBERON:0000073!7.13e-26!75;UBERON:0001016!7.13e-26!75;UBERON:0004121!4.15e-22!102;UBERON:0000924!4.15e-22!102;UBERON:0006601!4.15e-22!102;UBERON:0002346!5.12e-21!71;UBERON:0003075!5.12e-21!71;UBERON:0007284!5.12e-21!71;UBERON:0001049!4.10e-20!52;UBERON:0005068!4.10e-20!52;UBERON:0006241!4.10e-20!52;UBERON:0007135!4.10e-20!52;UBERON:0000955!2.46e-19!50;UBERON:0006238!2.46e-19!50;UBERON:0000033!2.64e-19!63;UBERON:0002616!1.27e-18!49;UBERON:0003056!1.01e-17!49;UBERON:0003080!1.53e-16!40;UBERON:0002020!2.93e-16!34;UBERON:0002780!6.13e-16!39;UBERON:0001890!6.13e-16!39;UBERON:0006240!6.13e-16!39;UBERON:0002791!8.83e-14!29;UBERON:0003528!8.83e-14!29;UBERON:0001893!8.83e-14!29;UBERON:0000956!7.36e-09!21;UBERON:0001869!7.36e-09!21;UBERON:0000203!7.36e-09!21;UBERON:0007811!1.37e-08!86;UBERON:0000468!6.62e-08!333;UBERON:0000153!4.85e-07!94 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001017,4.02e-32,73;UBERON:0001016,1.65e-30,75;UBERON:0002346,9.16e-27,64;UBERON:0003075,9.16e-27,64;UBERON:0007284,9.16e-27,64;UBERON:0004121,1.27e-26,95;UBERON:0000924,1.27e-26,95;UBERON:0006601,1.27e-26,95;UBERON:0000073,9.73e-26,54;UBERON:0001049,2.58e-24,52;UBERON:0005068,2.58e-24,52;UBERON:0006241,2.58e-24,52;UBERON:0007135,2.58e-24,52;UBERON:0010371,2.55e-22,73;UBERON:0003056,8.51e-22,49;UBERON:0000955,2.95e-21,47;UBERON:0006238,2.95e-21,47;UBERON:0002616,2.17e-20,46;UBERON:0003080,3.34e-20,40;UBERON:0002020,7.48e-20,34;UBERON:0002780,1.88e-19,39;UBERON:0001890,1.88e-19,39;UBERON:0006240,1.88e-19,39;UBERON:0003528,9.16e-17,29;UBERON:0002791,9.16e-17,29;UBERON:0001893,9.16e-17,29;UBERON:0010314,5.34e-13,92;UBERON:0000956,1.21e-10,21;UBERON:0001869,1.21e-10,21;UBERON:0000203,1.21e-10,21;UBERON:0000025,6.74e-08,114;UBERON:0002619,1.24e-07,17;UBERON:0002420,1.29e-07,8;UBERON:0007245,1.29e-07,8;UBERON:0010009,1.29e-07,8;UBERON:0010011,1.29e-07,8;UBERON:0000454,1.29e-07,8;UBERON:0004111,2.72e-07,122 | |||
|phase1_expression=1.60148847104794,1.04692622291808,0.909998478779072,0.90739263392049,0.500895729946347,0.33575854382378,0,0,0,0,0,0,0,0,0,0,0,0.157731082679119,0.137114433605739,0.42438965179803,3.31668831589172,0,0,0.319984845586813,0,0,0,0.646413698057667,0.380046838912748,0.756090389279792,0.443461021310609,0,0,0,0.577703239502549,0,0.408338712524738,0,0,0,0,0,0,0,0,0,0,6.97680500417429,2.63623419281366,4.27745777963423,2.51975558925653,4.31257693094915,0,0,0,0,0,0,14.566785181891,9.52183762689659,13.3104594736298,0,0,0,0,0,1.19840044207362,3.45796474789399,21.8785081970888,18.6308194897733,21.2428210964896,4.28476476605705,3.53389665522582,17.1487118900936,14.3768206527355,23.8996884518605,7.70811166995721,5.10749352340751,6.60508093001847,12.7929699098288,13.631658896759,11.4600941522487,6.70039197603314,11.2552522006336,10.6958773443767,9.72274332063103,9.25415925194169,9.50637173709033,0.227178579999552,0.226714680320357,0.579728977403356,0,0,0,0,0,1.12355536105401,0,0,0,3.80277233397037,0,0,0,0,0,0.505524445014783,0.79928715803342,0,0.445326417194474,0.867426633830679,0.913396434936424,0.922461989024234,0.60289056221049,0.823120949949934,0.251333182659351,0,0.722996784599558,0,0,0,0,0,2.04946557908083,0.83778682725382,0.255457055208591,0,0,0,7.63932260964596,7.32000964509802,19.2251158732683,5.9100268865374,4.09144731728529,6.02585329222724,7.30085683804909,0.509196819251581,0.746441823660558,1.51633655060205,0.210441855886474,3.25301107406759,5.28774840196988,5.40186389416048,4.21973489940002,5.71506592871154,3.20284300712124,3.5606655332697,0,0.215567992932842,1.13463648100692,0,0.219195732427575,0.278047249225598,0.348252166522167,0,0.796137067273973,0,0,0,0.207125772535502,0,0,0.23674473558521,0.196764231747404,0.154267112887378,0.232533944750408,0.268273401399619,0,0,0.164167464079095,0.162137619091711,0,0,0.134206418760372,7.57043814830858,13.9950272835827,0.660837565967596,0.793351699990633,0,0.464473343720877,0.902072229254653,1.00841762311671,2.00140239460383,1.52180500890047,1.42358718463353,0.329397909448022,0.502670417600539,1.59165177632921,1.75467678407208,0,0.864552199498777,0.796565093017469,0.189667900953082,0.571242563048644,0,1.22190796707189,0.969762435838129,0.841629838683823,1.13825766823663,0.147610147979602,0.156998727841375,0.493588655687202,0,0.166845105716094,0,0,0,0,0.763877555344259,0.287696137450811,0,0,0,0,0,0.252578877947112,0,0,3.8798169934987,1.70542270593436,1.62964976442026,2.8856664581782,3.28566347603903,4.69017520837084,2.85652369063216,3.70753930929818,2.83743259391144,2.6575762757853,2.07291199254733,2.94953966488328,1.89953480052485,3.61622646453779,0,0,0,0,6.58257418949947,3.7507739709505,0,0,1.57754109708128,1.95219372148319,3.01592756825919,2.38968797952552,2.45078541490634,1.41538265394416,0.404810701674894,3.21481443702443,1.97643888973262,17.3513510867776,0.851640511249612,0.534196811001766,0.162886959353576,1.48473110675282,0,0.242780636154981,0,0,0,0,0.516856586336442,0,0,0,0,0,12.9367050186439,2.16073312837572,1.16422815404479,2.14337035031592,1.41872186913819,1.60531935841864,4.11372551505302,1.2178597964584,0.23467170806371,0,0,0.32977250588296,0.322928853391811,0.180938774784468,0.238744688006273,0.492422699235184,0.291480836629851,6.48988557036784,0,0.206386867963223,0.185194527369712,0.188368457004691,0.136694227721025,0.228778173206523,0.169978429993855,0,0,0,0.316335993581135,1.82987520414164,1.83609079397062,0.627264888043406,1.31017538247707,0.269728692769641,0.41326727862668,1.04702376793612,0.388844919875379,0,0,0,0,0.388902376688095,0.774958940866387,0.337912250981556,0.821500670520278,0.5208175393758,0.314578033277133,0.483168241652012,0.288030006257865,0,0,0.102710957164827,0.129920822977795,0.179026695667481,0.198681354781265,0.120195449519969,0.147689527174577,0.504832249740738,0.15241361331,0.302478555410522,0.0974578807397524,0.192423683280659,0,0,0,0,0,0.19318959403219,0.187682475451182,5.49454872801795,1.2862102744744,0,1.6942555278512,4.14292712856459,2.86447756719698,2.57779773515531,2.74033007908257,2.2661816921691,1.35004500046361,3.15224842256954,4.98456649882625,1.55328093525546,4.8780053364563,3.19219898720825,4.78054096111576,3.8897074730927,2.93458427679175,4.96377472815038,4.66718128383392,5.15087643097235,4.49286893428541,8.08631077644152,5.57654459758527,5.09291121742406,4.21386783614471,4.48176066834085,4.36509564062661,5.71552429539688,4.28772005995965,5.20854895252004,2.88460130562315,4.26876868389752,4.80016953339582,3.90446773550542,4.05341522910446,4.0696996657052,5.45834406408918,5.24610568928394,4.57319932181931,3.6829759601298,4.20992752922171,6.73370725989286,4.62676570684279,6.2057823896605,2.04615521584845,4.02835787083512,4.82266527452853,5.74564329257276,2.10538447600868,2.14871054048298,1.72159498861959,0.661774257358546,0.927471342481686 | |||
|short_description=p7@Trim2 | |||
}} |
Revision as of 02:16, 4 August 2015
Short description: | p7@Trim2 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_7_at_Trim2_5end |
Coexpression cluster: | MCL_coexpression_mm9:3418 |
Association with transcript: | 0bp_to_ENSMUST00000122849, ENSMUST00000132283_5end |
EntrezGene: | 80890 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 1.65e-18 | 23 |
neuroblast (sensu Vertebrata) | 1.65e-18 | 23 |
ectodermal cell | 5.53e-18 | 44 |
neurectodermal cell | 5.53e-18 | 44 |
neuron | 6.99e-18 | 33 |
neuronal stem cell | 6.99e-18 | 33 |
neuroblast | 6.99e-18 | 33 |
electrically signaling cell | 6.99e-18 | 33 |
neural cell | 1.33e-17 | 43 |
electrically responsive cell | 4.66e-13 | 39 |
electrically active cell | 4.66e-13 | 39 |