FFCP PHASE1:Mm9::chr3:94282244..94282265,+: Difference between revisions
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{{FFCP|EntrezGene=78784|HGNC=|MCL_coexpression_id=13|UniProt=Q8CIN6|association_with_transcript=0bp_to_uc008qgl.1,uc008qgm.1_5end|description=CAGE_peak_1_at_Celf3_5end|id=chr3:94282244..94282265,+|ontology_enrichment_celltype=CL:0000540!2.24e-17!33;CL:0000047!2.24e-17!33;CL:0000031!2.24e-17!33;CL:0000404!2.24e-17!33;CL:0000117!3.02e-14!23;CL:0000337!3.02e-14!23;CL:0002319!6.99e-13!43;CL:0000221!1.03e-12!44;CL:0000133!1.03e-12!44;CL:0000393!8.21e-12!39;CL:0000211!8.21e-12!39;CL:0000055!1.60e-08!50|ontology_enrichment_celltype_v019_2=CL:0000540,7.41e-19,33;CL:0000047,7.41e-19,33;CL:0000031,7.41e-19,33;CL:0000404,7.41e-19,33;CL:0000117,4.74e-16,23;CL:0000337,4.74e-16,23;CL:0000393,1.16e-13,39;CL:0000211,1.16e-13,39;CL:0002319,8.45e-13,43;CL:0000221,3.52e-12,44;CL:0000133,3.52e-12,44|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001017!4.18e-32!73;UBERON:0005743!4.18e-32!73;UBERON:0002346!1.20e-31!71;UBERON:0003075!1.20e-31!71;UBERON:0007284!1.20e-31!71;UBERON:0000073!2.07e-31!75;UBERON:0001016!2.07e-31!75;UBERON:0004121!1.03e-29!102;UBERON:0000924!1.03e-29!102;UBERON:0006601!1.03e-29!102;UBERON:0000033!2.02e-25!63;UBERON:0003056!5.27e-25!49;UBERON:0001049!2.47e-24!52;UBERON:0005068!2.47e-24!52;UBERON:0006241!2.47e-24!52;UBERON:0007135!2.47e-24!52;UBERON:0000955!4.28e-24!50;UBERON:0006238!4.28e-24!50;UBERON:0002616!2.73e-23!49;UBERON:0003080!1.80e-21!40;UBERON:0002780!5.44e-21!39;UBERON:0001890!5.44e-21!39;UBERON:0006240!5.44e-21!39;UBERON:0002020!1.55e-18!34;UBERON:0002791!3.41e-16!29;UBERON:0003528!3.41e-16!29;UBERON:0001893!3.41e-16!29;UBERON:0007811!2.67e-12!86;UBERON:0000956!2.37e-11!21;UBERON:0001869!2.37e-11!21;UBERON:0000203!2.37e-11!21;UBERON:0000153!1.62e-09!94;UBERON:0002619!8.45e-09!17;UBERON:0002021!8.11e-08!10;UBERON:0000411!8.11e-08!10;UBERON:0001950!8.11e-08!10|ontology_enrichment_uberon_v019_2=UBERON:0001017,2.99e-35,73;UBERON:0002346,2.33e-34,64;UBERON:0003075,2.33e-34,64;UBERON:0007284,2.33e-34,64;UBERON:0001016,1.85e-33,75;UBERON:0000073,5.25e-30,54;UBERON:0004121,7.09e-30,95;UBERON:0000924,7.09e-30,95;UBERON:0006601,7.09e-30,95;UBERON:0003056,8.53e-29,49;UBERON:0001049,3.16e-28,52;UBERON:0005068,3.16e-28,52;UBERON:0006241,3.16e-28,52;UBERON:0007135,3.16e-28,52;UBERON:0010371,1.49e-26,73;UBERON:0000955,3.13e-26,47;UBERON:0006238,3.13e-26,47;UBERON:0002616,2.56e-25,46;UBERON:0003080,9.31e-25,40;UBERON:0002780,3.30e-24,39;UBERON:0001890,3.30e-24,39;UBERON:0006240,3.30e-24,39;UBERON:0002020,2.12e-21,34;UBERON:0010314,2.92e-21,92;UBERON:0003528,1.01e-18,29;UBERON:0002791,1.01e-18,29;UBERON:0001893,1.01e-18,29;UBERON:0000956,3.61e-13,21;UBERON:0001869,3.61e-13,21;UBERON:0000203,3.61e-13,21;UBERON:0002619,3.09e-10,17;UBERON:0002021,1.04e-08,10;UBERON:0000411,1.04e-08,10;UBERON:0001950,1.04e-08,10;UBERON:0002420,8.88e-07,8;UBERON:0007245,8.88e-07,8;UBERON:0010009,8.88e-07,8;UBERON:0010011,8.88e-07,8;UBERON:0000454,8.88e-07,8|phase1_expression=0.960893082628764,0,0,0,0,4.53274034162102,8.1764424208434,0,0,0,0,0,0,0,0,0,0,0,0,0,7.90902598404949,0,0,0.639969691173627,0.45881856213434,0,0.430761996159075,0.861884930743556,0.380046838912748,0,1.33038306393183,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.09012578190223,0,0,0.139986421625363,1.43752564364972,0,0,0,0,0,0,64.9435839359309,56.0730438028355,43.7343668419264,0,0,0,0,0,0.599200221036809,1.92109152660777,52.0521853788558,64.9378563375432,59.9426139851439,14.2825492201902,13.4729809980484,62.1028352019817,78.8808226480085,62.5068774894814,13.2139057199266,21.7068474744819,15.6678663921368,87.3087224773883,82.2473915985663,68.2396515429356,11.725685958058,18.0084035210138,17.5717984943332,15.3206864446307,16.9422300150933,36.1614924901083,0.075726193333184,0.604572480854284,0,0,0,0.539703191637817,0,0,1.96622188184453,0,0,0,0.563373679106722,0,0,0,0,0,0,0.5709193985953,0,6.38301197978747,7.98032503124225,8.22056791442781,4.38169444786511,9.04335843315735,10.8181610564848,4.52399728786832,0,0.433798070759735,0,0.161766849947409,0,0,5.59175283654366,20.7874365878198,16.7557365450764,1.53274233125155,0,0,0,15.7280171375064,45.7500602818627,59.5601629014977,55.971431101913,55.4902542406817,23.6878370797899,33.5839414550258,0,0,0,4.8401626853889,4.03373373184381,8.96618207290544,13.1445354757905,14.3169576943929,27.4867456571365,27.8006773018124,23.3317294153725,15.78090561508,0.215567992932842,0.189106080167819,0,0,0,0,0,0.398068533636986,0,0,0,0.207125772535502,0,0.180062061461015,0,0,0.308534225774757,0,0,0,0,0,0.162137619091711,0,0,0,54.465096678109,70.5925640921891,0.991256348951394,0.793351699990633,2.13288250535234,2.78684006232526,5.92790322081629,4.03367049246685,2.89091456998331,3.04361001780095,0.949058123089023,2.14108641141214,3.01602250560323,1.79060824837036,1.75467678407208,0.898819408654221,0.864552199498777,0.995706366271836,0.569003702859245,2.28497025219458,0,0,0,0.280543279561274,0,0.147610147979602,0,0,0,0,0.589676985339609,0,0,0,0,0,0,0,0,0.372140947668503,0,0,0,0,0,0.947457058852424,0.3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| {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=entrezgene:78784 | |||
|HGNC= | |||
|MCL_coexpression_id=13 | |||
|TSSclassifier=NA | |||
|UniProt=uniprot:Q8CIN6 | |||
|association_with_transcript=0bp_to_uc008qgl.1,uc008qgm.1_5end | |||
|cluster_id=chr3:94282244..94282265,+ | |||
|description=CAGE_peak_1_at_Celf3_5end | |||
|id=chr3:94282244..94282265,+ | |||
|ontology_enrichment_celltype=CL:0000540!2.24e-17!33;CL:0000047!2.24e-17!33;CL:0000031!2.24e-17!33;CL:0000404!2.24e-17!33;CL:0000117!3.02e-14!23;CL:0000337!3.02e-14!23;CL:0002319!6.99e-13!43;CL:0000221!1.03e-12!44;CL:0000133!1.03e-12!44;CL:0000393!8.21e-12!39;CL:0000211!8.21e-12!39;CL:0000055!1.60e-08!50 | |||
|ontology_enrichment_celltype_v019_2=CL:0000540,7.41e-19,33;CL:0000047,7.41e-19,33;CL:0000031,7.41e-19,33;CL:0000404,7.41e-19,33;CL:0000117,4.74e-16,23;CL:0000337,4.74e-16,23;CL:0000393,1.16e-13,39;CL:0000211,1.16e-13,39;CL:0002319,8.45e-13,43;CL:0000221,3.52e-12,44;CL:0000133,3.52e-12,44 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!4.18e-32!73;UBERON:0005743!4.18e-32!73;UBERON:0002346!1.20e-31!71;UBERON:0003075!1.20e-31!71;UBERON:0007284!1.20e-31!71;UBERON:0000073!2.07e-31!75;UBERON:0001016!2.07e-31!75;UBERON:0004121!1.03e-29!102;UBERON:0000924!1.03e-29!102;UBERON:0006601!1.03e-29!102;UBERON:0000033!2.02e-25!63;UBERON:0003056!5.27e-25!49;UBERON:0001049!2.47e-24!52;UBERON:0005068!2.47e-24!52;UBERON:0006241!2.47e-24!52;UBERON:0007135!2.47e-24!52;UBERON:0000955!4.28e-24!50;UBERON:0006238!4.28e-24!50;UBERON:0002616!2.73e-23!49;UBERON:0003080!1.80e-21!40;UBERON:0002780!5.44e-21!39;UBERON:0001890!5.44e-21!39;UBERON:0006240!5.44e-21!39;UBERON:0002020!1.55e-18!34;UBERON:0002791!3.41e-16!29;UBERON:0003528!3.41e-16!29;UBERON:0001893!3.41e-16!29;UBERON:0007811!2.67e-12!86;UBERON:0000956!2.37e-11!21;UBERON:0001869!2.37e-11!21;UBERON:0000203!2.37e-11!21;UBERON:0000153!1.62e-09!94;UBERON:0002619!8.45e-09!17;UBERON:0002021!8.11e-08!10;UBERON:0000411!8.11e-08!10;UBERON:0001950!8.11e-08!10 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001017,2.99e-35,73;UBERON:0002346,2.33e-34,64;UBERON:0003075,2.33e-34,64;UBERON:0007284,2.33e-34,64;UBERON:0001016,1.85e-33,75;UBERON:0000073,5.25e-30,54;UBERON:0004121,7.09e-30,95;UBERON:0000924,7.09e-30,95;UBERON:0006601,7.09e-30,95;UBERON:0003056,8.53e-29,49;UBERON:0001049,3.16e-28,52;UBERON:0005068,3.16e-28,52;UBERON:0006241,3.16e-28,52;UBERON:0007135,3.16e-28,52;UBERON:0010371,1.49e-26,73;UBERON:0000955,3.13e-26,47;UBERON:0006238,3.13e-26,47;UBERON:0002616,2.56e-25,46;UBERON:0003080,9.31e-25,40;UBERON:0002780,3.30e-24,39;UBERON:0001890,3.30e-24,39;UBERON:0006240,3.30e-24,39;UBERON:0002020,2.12e-21,34;UBERON:0010314,2.92e-21,92;UBERON:0003528,1.01e-18,29;UBERON:0002791,1.01e-18,29;UBERON:0001893,1.01e-18,29;UBERON:0000956,3.61e-13,21;UBERON:0001869,3.61e-13,21;UBERON:0000203,3.61e-13,21;UBERON:0002619,3.09e-10,17;UBERON:0002021,1.04e-08,10;UBERON:0000411,1.04e-08,10;UBERON:0001950,1.04e-08,10;UBERON:0002420,8.88e-07,8;UBERON:0007245,8.88e-07,8;UBERON:0010009,8.88e-07,8;UBERON:0010011,8.88e-07,8;UBERON:0000454,8.88e-07,8 | |||
|phase1_expression=0.960893082628764,0,0,0,0,4.53274034162102,8.1764424208434,0,0,0,0,0,0,0,0,0,0,0,0,0,7.90902598404949,0,0,0.639969691173627,0.45881856213434,0,0.430761996159075,0.861884930743556,0.380046838912748,0,1.33038306393183,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.09012578190223,0,0,0.139986421625363,1.43752564364972,0,0,0,0,0,0,64.9435839359309,56.0730438028355,43.7343668419264,0,0,0,0,0,0.599200221036809,1.92109152660777,52.0521853788558,64.9378563375432,59.9426139851439,14.2825492201902,13.4729809980484,62.1028352019817,78.8808226480085,62.5068774894814,13.2139057199266,21.7068474744819,15.6678663921368,87.3087224773883,82.2473915985663,68.2396515429356,11.725685958058,18.0084035210138,17.5717984943332,15.3206864446307,16.9422300150933,36.1614924901083,0.075726193333184,0.604572480854284,0,0,0,0.539703191637817,0,0,1.96622188184453,0,0,0,0.563373679106722,0,0,0,0,0,0,0.5709193985953,0,6.38301197978747,7.98032503124225,8.22056791442781,4.38169444786511,9.04335843315735,10.8181610564848,4.52399728786832,0,0.433798070759735,0,0.161766849947409,0,0,5.59175283654366,20.7874365878198,16.7557365450764,1.53274233125155,0,0,0,15.7280171375064,45.7500602818627,59.5601629014977,55.971431101913,55.4902542406817,23.6878370797899,33.5839414550258,0,0,0,4.8401626853889,4.03373373184381,8.96618207290544,13.1445354757905,14.3169576943929,27.4867456571365,27.8006773018124,23.3317294153725,15.78090561508,0.215567992932842,0.189106080167819,0,0,0,0,0,0.398068533636986,0,0,0,0.207125772535502,0,0.180062061461015,0,0,0.308534225774757,0,0,0,0,0,0.162137619091711,0,0,0,54.465096678109,70.5925640921891,0.991256348951394,0.793351699990633,2.13288250535234,2.78684006232526,5.92790322081629,4.03367049246685,2.89091456998331,3.04361001780095,0.949058123089023,2.14108641141214,3.01602250560323,1.79060824837036,1.75467678407208,0.898819408654221,0.864552199498777,0.995706366271836,0.569003702859245,2.28497025219458,0,0,0,0.280543279561274,0,0.147610147979602,0,0,0,0,0.589676985339609,0,0,0,0,0,0,0,0,0.372140947668503,0,0,0,0,0,0.947457058852424,0.325929952884052,0.509235257325564,0,0.502518772325447,0.714130922658041,0.195133647857799,0.157635144106191,0,0,0,0,0.144649058581512,0,0.54390568381871,0,0,8.34863067936518,7.501547941901,0.163934945376675,0,15.1443945319803,12.8844785617891,17.2338718186239,6.4521575447189,9.35754431146055,15.286132662597,12.9539424535966,14.6127928955656,17.392662229647,80.9729717382954,0.283880170416537,0.178065603667255,0.162886959353576,0,5.30980553359851,5.58395463156457,5.44182402536552,3.77210159511796,6.79194353625777,6.45613810682248,6.20227903603731,7.99774204850512,7.48644494607915,1.8962205476149,3.16255825724996,0,33.0226417581174,6.84232157318979,11.1248468053169,10.9311887866112,16.1379612614469,21.2258892946464,19.7458824722545,29.2286351150015,0.23467170806371,0,0.882113592219848,0,0,0.0603129249281559,0,0,2.04036585640896,3.33765543618917,0,0.412773735926445,0,0,0,0,0,0,0,3.81868247206045,3.63786392618306,3.25311147402958,1.51207477150522,1.46361807210128,2.83871332870031,2.96701562046606,2.72756403893609,1.57053565190418,1.55537967950151,0,0.56369293868419,0,0,0,0.129159823477731,0,0,0,0,0,2.30424005006292,0,0.405450430580328,0,0,0.358053391334963,0,0,0,0,0.0762068066549998,0,0.0974578807397524,0.0962118416403295,0.116876902181569,0,0,0,0,0.19318959403219,0,0.183151624267265,0.428736758158132,0,63.8169582157285,68.1281350030622,73.3306257202428,46.5722124151393,43.1601987455505,53.6329667146687,56.7018900194717,55.3895079965791,57.0959435320098,53.8470724221893,8.92571189223919,23.1434426572598,14.000155671839,9.48116196566347,9.64220548088719,5.88299227040045,5.778414922842,6.59312183164461,7.06022261101994,5.81203587056734,4.81610669791456,7.73367999682912,5.43120743325318,7.17081706934536,7.46661096422972,8.57328644309533,8.92309309775387,6.94473193669338,7.82963211526283,7.21274708658547,4.80016953339582,4.96932257246145,6.67621331852499,5.66851024866081,7.34053167239579,6.68455402344244,5.85369513192872,6.05060336307039,5.83957689537206,5.05028044491965,6.16902094245706,5.81176446015824,6.54769669071503,6.19747364743864,6.75173138433995,25.4806789496705,6.31615342802603,10.7435527024149,1.14772999241306,1.54413993383661,0 | |||
|short_description=p1@Celf3 | |||
}} |
Revision as of 07:36, 4 August 2015
Short description: | p1@Celf3 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Celf3_5end |
Coexpression cluster: | MCL_coexpression_mm9:13 |
Association with transcript: | 0bp_to_uc008qgl.1, uc008qgm.1_5end |
EntrezGene: | 78784 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neuron | 7.41e-19 | 33 |
neuronal stem cell | 7.41e-19 | 33 |
neuroblast | 7.41e-19 | 33 |
electrically signaling cell | 7.41e-19 | 33 |
CNS neuron (sensu Vertebrata) | 4.74e-16 | 23 |
neuroblast (sensu Vertebrata) | 4.74e-16 | 23 |
electrically responsive cell | 1.16e-13 | 39 |
electrically active cell | 1.16e-13 | 39 |
neural cell | 8.45e-13 | 43 |
ectodermal cell | 3.52e-12 | 44 |
neurectodermal cell | 3.52e-12 | 44 |