FFCP PHASE1:Hg19::chr8:134584282..134584306,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=6482 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=10862 | |||
|TSSclassifier=strong | |||
|UniProt=Q11201 | |||
|association_with_transcript=-99bp_to_ENST00000319914,NM_003033,NM_173344,uc003yuk.2,uc003yum.2_5end | |||
|description=CAGE_peak_4_at_ST3GAL1_5end | |||
|id=chr8:134584282..134584306,- | |||
|ontology_enrichment_celltype=CL:0000037!3.86e-49!172;CL:0000566!3.86e-49!172;CL:0002032!1.08e-45!165;CL:0000837!1.08e-45!165;CL:0000988!1.72e-45!182;CL:0000738!1.27e-42!140;CL:0002087!1.10e-36!119;CL:0002031!1.88e-35!124;CL:0000763!2.91e-30!112;CL:0000049!2.91e-30!112;CL:0000766!1.51e-27!76;CL:0002057!2.90e-24!42;CL:0000839!1.56e-23!70;CL:0000860!1.95e-22!45;CL:0000557!1.13e-21!71;CL:0002194!3.52e-21!63;CL:0000576!3.52e-21!63;CL:0000040!3.52e-21!63;CL:0000559!3.52e-21!63;CL:0002009!2.47e-19!65;CL:0000542!1.75e-13!53;CL:0000051!1.75e-13!53;CL:0000838!2.57e-13!52;CL:0000084!1.25e-12!25;CL:0000827!1.25e-12!25;CL:0000791!8.22e-11!18;CL:0000789!8.22e-11!18;CL:0002420!8.22e-11!18;CL:0002419!8.22e-11!18;CL:0000790!8.22e-11!18;CL:0000625!2.80e-07!11;CL:0000134!6.71e-07!358 | |||
|ontology_enrichment_celltype_v019=CL:0000860;7.64e-24;33!CL:0002057;7.64e-24;33!CL:0000576;2.63e-20;48!CL:0000473;4.28e-20;39!CL:0000234;4.28e-20;39!CL:0000766;1.71e-17;69!CL:0000084;1.88e-16;25!CL:0002087;9.82e-16;104!CL:0000763;4.33e-14;100!CL:0000791;5.87e-14;18!CL:0000789;5.87e-14;18!CL:0002419;5.87e-14;18!CL:0000738;2.29e-12;136!CL:0000988;4.16e-11;177!CL:0000542;3.27e-10;53!CL:0000625;3.22e-09;11!CL:0000094;1.34e-07;8 | |||
|ontology_enrichment_celltype_v019_2=CL:0000037,8.52e-68,168;CL:0002032,4.26e-63,161;CL:0000837,4.26e-63,161;CL:0000988,3.00e-62,177;CL:0000738,1.12e-59,136;CL:0002087,4.98e-52,115;CL:0002031,3.52e-51,120;CL:0000763,1.85e-41,108;CL:0000049,1.85e-41,108;CL:0000766,3.41e-39,72;CL:0000839,1.30e-33,66;CL:0000860,3.95e-32,42;CL:0002057,3.95e-32,42;CL:0000473,3.96e-32,48;CL:0000234,3.96e-32,48;CL:0000557,6.74e-32,67;CL:0002194,1.90e-30,59;CL:0000576,1.90e-30,59;CL:0000040,1.90e-30,59;CL:0000559,1.90e-30,59;CL:0002009,1.11e-28,61;CL:0000542,2.44e-18,53;CL:0000051,2.44e-18,53;CL:0000838,4.09e-18,52;CL:0000084,1.90e-16,25;CL:0000827,1.90e-16,25;CL:0000791,5.31e-14,18;CL:0000789,5.31e-14,18;CL:0002420,5.31e-14,18;CL:0002419,5.31e-14,18;CL:0000790,5.31e-14,18;CL:0000134,2.02e-13,354;CL:0002320,2.76e-12,361;CL:0000625,2.94e-09,11;CL:0000219,3.78e-09,386;CL:0000094,1.26e-07,8;CL:0002393,2.66e-07,9;CL:0002397,2.66e-07,9;CL:0000048,6.46e-07,427 | |||
|ontology_enrichment_development_v019=CL:0002057;2.45e-23;42!CL:0000790;5.87e-14;18!CL:0000049;3.99e-12;108!CL:0000051;3.27e-10;53 | |||
|ontology_enrichment_disease=DOID:1240!2.46e-07!39 | |||
|ontology_enrichment_disease_v019=DOID:1240;3.25e-07;39 | |||
|ontology_enrichment_disease_v019_2=DOID:1240,5.32e-09,39;DOID:2531,4.10e-08,51;DOID:0060083,4.10e-08,51 | |||
|ontology_enrichment_uberon=UBERON:0002390!9.97e-28!102;UBERON:0003061!9.97e-28!102;UBERON:0002193!4.22e-26!112;UBERON:0002371!5.92e-19!80;UBERON:0001474!7.56e-17!86;UBERON:0002405!6.52e-16!115;UBERON:0007023!3.24e-12!115;UBERON:0004765!2.69e-11!101;UBERON:0001434!2.69e-11!101;UBERON:0000178!2.60e-08!15;UBERON:0000179!2.60e-08!15;UBERON:0000463!2.60e-08!15;UBERON:0001950!3.33e-07!20 | |||
|ontology_enrichment_uberon_v019=UBERON:0000178;3.43e-09;15!UBERON:0000179;3.43e-09;15!UBERON:0000463;3.43e-09;15!UBERON:0001950;1.58e-08;20!UBERON:0002619;3.49e-08;22!UBERON:0002390;3.92e-07;32 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,3.21e-40,98;UBERON:0003061,3.21e-40,98;UBERON:0002193,1.12e-36,108;UBERON:0002371,3.61e-29,76;UBERON:0002405,1.62e-28,93;UBERON:0001474,4.70e-27,82;UBERON:0004765,2.52e-22,90;UBERON:0001434,1.29e-17,100;UBERON:0002384,4.86e-11,371;UBERON:0003081,8.15e-11,203;UBERON:0000178,3.79e-09,15;UBERON:0000179,3.79e-09,15;UBERON:0000463,3.79e-09,15;UBERON:0001950,1.53e-08,20;UBERON:0002619,3.84e-08,22;UBERON:0007023,2.10e-07,114 | |||
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| |||
|short_description=p4@ST3GAL1 | |||
}} |
Revision as of 00:04, 23 January 2014
Short description: | p4@ST3GAL1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_ST3GAL1_5end |
Coexpression cluster: | NA |
Association with transcript: | -99bp_to_ENST00000319914, NM_003033, NM_173344, uc003yuk.2, uc003yum.2_5end |
EntrezGene: | ST3GAL1 |
HGNC: | 10862 |
UniProt: | Q11201 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 3.21e-40 | 98 |
blood island | 3.21e-40 | 98 |
hemolymphoid system | 1.12e-36 | 108 |
bone marrow | 3.61e-29 | 76 |
immune system | 1.62e-28 | 93 |
bone element | 4.70e-27 | 82 |
skeletal element | 2.52e-22 | 90 |
skeletal system | 1.29e-17 | 100 |
connective tissue | 4.86e-11 | 371 |
lateral plate mesoderm | 8.15e-11 | 203 |
blood | 3.79e-09 | 15 |
haemolymphatic fluid | 3.79e-09 | 15 |
organism substance | 3.79e-09 | 15 |
neocortex | 1.53e-08 | 20 |
regional part of cerebral cortex | 3.84e-08 | 22 |
adult organism | 2.10e-07 | 114 |
Ontology term | p-value | n |
---|---|---|
leukemia | 5.32e-09 | 39 |
hematologic cancer | 4.10e-08 | 51 |
immune system cancer | 4.10e-08 | 51 |