FFCP PHASE1:Mm9::chr4:137237578..137237634,+: Difference between revisions
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{{FFCP|EntrezGene=110351|HGNC=|UniProt=E9PZZ8,Q6A063,A2ALS4|association_with_transcript=0bp_to_ENSMUST00000047243,NM_001081155,uc008vjn.1,uc008vjo.1_5end|description=CAGE_peak_3_at_Rap1gap_5end|id=chr4:137237578..137237634,+|ontology_enrichment_celltype=CL:0000540!1.51e-12!33;CL:0000047!1.51e-12!33;CL:0000031!1.51e-12!33;CL:0000404!1.51e-12!33;CL:0000221!4.59e-12!44;CL:0000133!4.59e-12!44;CL:0002319!2.01e-11!43;CL:0000117!1.67e-09!23;CL:0000337!1.67e-09!23;CL:0000393!2.71e-08!39;CL:0000211!2.71e-08!39;CL:0000055!5.45e-08!50|ontology_enrichment_celltype_v019_2=CL:0000540,4.24e-13,33;CL:0000047,4.24e-13,33;CL:0000031,4.24e-13,33;CL:0000404,4.24e-13,33;CL:0000221,2.01e-11,44;CL:0000133,2.01e-11,44;CL:0002319,1.08e-10,43;CL:0000117,1.30e-10,23;CL:0000337,1.30e-10,23;CL:0000393,1.92e-09,39;CL:0000211,1.92e-09,39|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001017!6.79e-25!73;UBERON:0005743!6.79e-25!73;UBERON:0000073!1.63e-24!75;UBERON:0001016!1.63e-24!75;UBERON:0004121!1.52e-23!102;UBERON:0000924!1.52e-23!102;UBERON:0006601!1.52e-23!102;UBERON:0001049!1.87e-17!52;UBERON:0005068!1.87e-17!52;UBERON:0006241!1.87e-17!52;UBERON:0007135!1.87e-17!52;UBERON:0000033!1.95e-16!63;UBERON:0002346!3.79e-16!71;UBERON:0003075!3.79e-16!71;UBERON:0007284!3.79e-16!71;UBERON:0000955!4.42e-16!50;UBERON:0006238!4.42e-16!50;UBERON:0002616!1.99e-15!49;UBERON:0002020!1.94e-14!34;UBERON:0003080!2.82e-12!40;UBERON:0002780!1.18e-11!39;UBERON:0001890!1.18e-11!39;UBERON:0006240!1.18e-11!39;UBERON:0002791!1.48e-11!29;UBERON:0003528!1.48e-11!29;UBERON:0001893!1.48e-11!29;UBERON:0003056!6.70e-11!49;UBERON:0000153!1.30e-08!94;UBERON:0007811!3.52e-08!86;UBERON:0000956!9.03e-08!21;UBERON:0001869!9.03e-08!21;UBERON:0000203!9.03e-08!21;UBERON:0002619!1.03e-07!17;UBERON:0000468!2.40e-07!333|ontology_enrichment_uberon_v019_2=UBERON:0001017,3.22e-27,73;UBERON:0001016,7.92e-26,75;UBERON:0004121,3.66e-23,95;UBERON:0000924,3.66e-23,95;UBERON:0006601,3.66e-23,95;UBERON:0000073,7.76e-21,54;UBERON:0001049,1.10e-19,52;UBERON:0005068,1.10e-19,52;UBERON:0006241,1.10e-19,52;UBERON:0007135,1.10e-19,52;UBERON:0002346,8.20e-17,64;UBERON:0003075,8.20e-17,64;UBERON:0007284,8.20e-17,64;UBERON:0000955,2.64e-16,47;UBERON:0006238,2.64e-16,47;UBERON:0010371,2.77e-16,73;UBERON:0002020,4.77e-16,34;UBERON:0002616,1.59e-15,46;UBERON:0003080,5.41e-13,40;UBERON:0003528,1.72e-12,29;UBERON:0002791,1.72e-12,29;UBERON:0001893,1.72e-12,29;UBERON:0002780,3.02e-12,39;UBERON:0001890,3.02e-12,39;UBERON:0006240,3.02e-12,39;UBERON:0003056,3.76e-11,49;UBERON:0010314,6.40e-10,92;UBERON:0002619,1.24e-08,17;UBERON:0002021,4.27e-08,10;UBERON:0000411,4.27e-08,10;UBERON:0001950,4.27e-08,10;UBERON:0000956,7.48e-08,21;UBERON:0001869,7.48e-08,21;UBERON:0000203,7.48e-08,21;UBERON:0003076,9.40e-08,12;UBERON:0003057,9.40e-08,12|phase1_expression=5.2849119544582,0.697950815278722,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.656861476496,0,0,0.47997726838022,0,0,0,0.430942465371778,0,0,0.221730510655305,0,0,0,0,0,0,0,0,0,0,0,0,0,0.101376931219515,0,0,5.66865406589161,0.439372365468944,0.194429899074283,0.839918529752175,0,0,0,0,0,0,0,2.42779753031517,7.40587370980846,2.53532561402472,0,0,0,0,0,5.39280198933128,14.2160772968975,1.24427534770173,0.945041568321835,0.210324961351382,18.852964970651,17.4486147351775,3.06226998037385,2.77951865952885,3.67687514644008,2.20231761998777,8.2996769755372,6.45147439676223,2.2420668914133,2.65314166446988,5.2091337055676,5.58365998002762,10.1297269805702,9.77908785771585,6.48182888042069,11.3897344639282,2.79599168737951,0.454357159999104,0.453429360640713,21.1601076752225,0.860423876981386,0,0,0,0,0.983110940922263,0,0,0,19.1547050896285,0,0,0,0,0,0,1.1418387971906,0.258937883647172,1.92974780784272,0.173485326766136,0.304465478312141,0.691846491768175,1.20578112442098,1.17588707135705,0.879666139307728,0,0.289198713839823,0,2.42650274921114,0.883366073841574,0,0,5.85561594023094,5.23616767033638,0.255457055208591,0,0,0,13.0317856282196,10.980014467647,7.413606774659,7.82209440865244,9.46147192122223,11.2205544062162,15.7374025175725,0.407357455401265,0.497627882440372,0.505445516867349,1.05220927943237,0,0,0.180062129805349,0.452114453507145,0.476255494059295,1.7935920839879,2.43624483855295,2.06962696591213,0,0.189106080167819,0.879755620819744,2.6303487891309,1.66828349535359,3.48252166522167,2.88094990971121,0,0,0,0,0,0,0,0,0,0.154267112887378,0,0,0,0.16455984991348,0,0.0810688095458557,0.292399974850665,0.219550115291051,0,9.2527577368216,4.83651678182637,0,0,0,0.232236671860439,0.257734922644187,0.80673409849337,0.667134131534611,0.570676878337677,0,0.329397909448022,1.50801125280162,1.39269530428806,1.55971269695296,0,0,0,0,0.342745537829186,0,0.407302655690628,0.193952487167626,0.0701358198903186,4.61626721007078,15.6466756858378,18.6828486131236,14.3140710149289,0.889357881261447,0,0,0,0,0,0,0,0,0.274561413188081,1.43768206527355,0,0.936113019343682,0,0,0,0.739012760666419,0,0,0.169745085775188,0.234690248288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| {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=entrezgene:110351 | |||
|HGNC= | |||
|TSSclassifier=NA | |||
|UniProt=uniprot:E9PZZ8,uniprot:Q6A063,uniprot:A2ALS4 | |||
|association_with_transcript=0bp_to_ENSMUST00000047243,NM_001081155,uc008vjn.1,uc008vjo.1_5end | |||
|cluster_id=chr4:137237578..137237634,+ | |||
|description=CAGE_peak_3_at_Rap1gap_5end | |||
|id=chr4:137237578..137237634,+ | |||
|ontology_enrichment_celltype=CL:0000540!1.51e-12!33;CL:0000047!1.51e-12!33;CL:0000031!1.51e-12!33;CL:0000404!1.51e-12!33;CL:0000221!4.59e-12!44;CL:0000133!4.59e-12!44;CL:0002319!2.01e-11!43;CL:0000117!1.67e-09!23;CL:0000337!1.67e-09!23;CL:0000393!2.71e-08!39;CL:0000211!2.71e-08!39;CL:0000055!5.45e-08!50 | |||
|ontology_enrichment_celltype_v019_2=CL:0000540,4.24e-13,33;CL:0000047,4.24e-13,33;CL:0000031,4.24e-13,33;CL:0000404,4.24e-13,33;CL:0000221,2.01e-11,44;CL:0000133,2.01e-11,44;CL:0002319,1.08e-10,43;CL:0000117,1.30e-10,23;CL:0000337,1.30e-10,23;CL:0000393,1.92e-09,39;CL:0000211,1.92e-09,39 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!6.79e-25!73;UBERON:0005743!6.79e-25!73;UBERON:0000073!1.63e-24!75;UBERON:0001016!1.63e-24!75;UBERON:0004121!1.52e-23!102;UBERON:0000924!1.52e-23!102;UBERON:0006601!1.52e-23!102;UBERON:0001049!1.87e-17!52;UBERON:0005068!1.87e-17!52;UBERON:0006241!1.87e-17!52;UBERON:0007135!1.87e-17!52;UBERON:0000033!1.95e-16!63;UBERON:0002346!3.79e-16!71;UBERON:0003075!3.79e-16!71;UBERON:0007284!3.79e-16!71;UBERON:0000955!4.42e-16!50;UBERON:0006238!4.42e-16!50;UBERON:0002616!1.99e-15!49;UBERON:0002020!1.94e-14!34;UBERON:0003080!2.82e-12!40;UBERON:0002780!1.18e-11!39;UBERON:0001890!1.18e-11!39;UBERON:0006240!1.18e-11!39;UBERON:0002791!1.48e-11!29;UBERON:0003528!1.48e-11!29;UBERON:0001893!1.48e-11!29;UBERON:0003056!6.70e-11!49;UBERON:0000153!1.30e-08!94;UBERON:0007811!3.52e-08!86;UBERON:0000956!9.03e-08!21;UBERON:0001869!9.03e-08!21;UBERON:0000203!9.03e-08!21;UBERON:0002619!1.03e-07!17;UBERON:0000468!2.40e-07!333 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001017,3.22e-27,73;UBERON:0001016,7.92e-26,75;UBERON:0004121,3.66e-23,95;UBERON:0000924,3.66e-23,95;UBERON:0006601,3.66e-23,95;UBERON:0000073,7.76e-21,54;UBERON:0001049,1.10e-19,52;UBERON:0005068,1.10e-19,52;UBERON:0006241,1.10e-19,52;UBERON:0007135,1.10e-19,52;UBERON:0002346,8.20e-17,64;UBERON:0003075,8.20e-17,64;UBERON:0007284,8.20e-17,64;UBERON:0000955,2.64e-16,47;UBERON:0006238,2.64e-16,47;UBERON:0010371,2.77e-16,73;UBERON:0002020,4.77e-16,34;UBERON:0002616,1.59e-15,46;UBERON:0003080,5.41e-13,40;UBERON:0003528,1.72e-12,29;UBERON:0002791,1.72e-12,29;UBERON:0001893,1.72e-12,29;UBERON:0002780,3.02e-12,39;UBERON:0001890,3.02e-12,39;UBERON:0006240,3.02e-12,39;UBERON:0003056,3.76e-11,49;UBERON:0010314,6.40e-10,92;UBERON:0002619,1.24e-08,17;UBERON:0002021,4.27e-08,10;UBERON:0000411,4.27e-08,10;UBERON:0001950,4.27e-08,10;UBERON:0000956,7.48e-08,21;UBERON:0001869,7.48e-08,21;UBERON:0000203,7.48e-08,21;UBERON:0003076,9.40e-08,12;UBERON:0003057,9.40e-08,12 | |||
|phase1_expression=5.2849119544582,0.697950815278722,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.656861476496,0,0,0.47997726838022,0,0,0,0.430942465371778,0,0,0.221730510655305,0,0,0,0,0,0,0,0,0,0,0,0,0,0.101376931219515,0,0,5.66865406589161,0.439372365468944,0.194429899074283,0.839918529752175,0,0,0,0,0,0,0,2.42779753031517,7.40587370980846,2.53532561402472,0,0,0,0,0,5.39280198933128,14.2160772968975,1.24427534770173,0.945041568321835,0.210324961351382,18.852964970651,17.4486147351775,3.06226998037385,2.77951865952885,3.67687514644008,2.20231761998777,8.2996769755372,6.45147439676223,2.2420668914133,2.65314166446988,5.2091337055676,5.58365998002762,10.1297269805702,9.77908785771585,6.48182888042069,11.3897344639282,2.79599168737951,0.454357159999104,0.453429360640713,21.1601076752225,0.860423876981386,0,0,0,0,0.983110940922263,0,0,0,19.1547050896285,0,0,0,0,0,0,1.1418387971906,0.258937883647172,1.92974780784272,0.173485326766136,0.304465478312141,0.691846491768175,1.20578112442098,1.17588707135705,0.879666139307728,0,0.289198713839823,0,2.42650274921114,0.883366073841574,0,0,5.85561594023094,5.23616767033638,0.255457055208591,0,0,0,13.0317856282196,10.980014467647,7.413606774659,7.82209440865244,9.46147192122223,11.2205544062162,15.7374025175725,0.407357455401265,0.497627882440372,0.505445516867349,1.05220927943237,0,0,0.180062129805349,0.452114453507145,0.476255494059295,1.7935920839879,2.43624483855295,2.06962696591213,0,0.189106080167819,0.879755620819744,2.6303487891309,1.66828349535359,3.48252166522167,2.88094990971121,0,0,0,0,0,0,0,0,0,0.154267112887378,0,0,0,0.16455984991348,0,0.0810688095458557,0.292399974850665,0.219550115291051,0,9.2527577368216,4.83651678182637,0,0,0,0.232236671860439,0.257734922644187,0.80673409849337,0.667134131534611,0.570676878337677,0,0.329397909448022,1.50801125280162,1.39269530428806,1.55971269695296,0,0,0,0,0.342745537829186,0,0.407302655690628,0.193952487167626,0.0701358198903186,4.61626721007078,15.6466756858378,18.6828486131236,14.3140710149289,0.889357881261447,0,0,0,0,0,0,0,0,0.274561413188081,1.43768206527355,0,0.936113019343682,0,0,0,0.739012760666419,0,0,0.169745085775188,0.234690248288502,0.167506257441816,0,0.195133647857799,0.630540576424764,0,0.318909537314974,0.163863314715738,0.345369963731791,0.144649058581512,0,0,0.491764273019036,4.41498794087572,7.06422595946285,10.3146284201139,0.163934945376675,1.26235463602186,0.94652465824877,0.780877488593277,3.66219776145758,4.77937595905104,6.90675889655422,9.05844898524264,2.83367491172426,1.46127928955656,4.34816555741176,12.8528526568723,0.709700426041343,1.24645922567079,0.488660878060728,0.659880491890142,1.32745138339963,0.728341908464944,1.51161778482376,3.58349651536206,3.83892460745005,2.76691633149535,1.55056975900933,5.08947221268508,4.9909632973861,5.05658812697306,2.10837217149998,4.12542172992747,12.2558258071364,0,0.258717367565509,0.428674070063185,0,0.535106452806212,3.1264313914403,3.65357938937519,0,0,0.441056796109924,1.31909002353184,0,0.663442174209714,0.596861720015682,0.492422699235184,0.582961673259701,5.00648315428376,0,0.206386867963223,0,0,0.136694227721025,0,0,0,0,0.954670618015114,0,1.42323626988794,0.86404272657441,1.25452977608681,1.09181281873089,1.61837215661785,1.23980183588004,0.26175594198403,0.518459893167171,4.34937519160848,1.69107881605257,0,0,0.194451188344048,1.03327858782185,0,0.117357238645754,0.2604087696879,0,2.17425708743405,0.864090018773596,0.316011120628178,0,0.102710957164827,0,0.358053391334963,0.198681354781265,0.120195449519969,0.295379054349154,0.403865799792591,0.15241361331,0.100826185136841,0.292373642219257,0.192423683280659,0.584384510907845,2.0405734525369,0,0,0,0.772758376128762,0,0.36630324853453,0.428736758158132,0,9.60078132449013,8.28585425712918,8.59343270159095,4.29632955859219,7.53590771747707,7.55393897389701,9.45031500324528,7.20513925158753,6.79713613476307,4.14208249401456,0.31136204275253,0.798049746802062,0.341467211508268,2.18796045361465,2.09613162627982,0.367687016900028,2.00022055021454,2.26638562962784,3.20919209591815,1.51618327058278,1.01391719956096,1.13175804831646,1.03005658216871,1.79270426733634,1.09127391015665,1.42888107384922,1.85414921511769,0.77163688185482,0.824171801606613,2.50238164228475,2.40008476669791,0.887379030796687,1.1921809497366,2.76158191601424,1.12931256498397,1.94613598150856,1.82927972872773,2.36762740294059,1.22223702461276,1.68342681497322,1.77952527186261,2.1670986122624,2.04615521584845,1.85924209423159,2.12197272079256,2.74791635731741,3.04111090979031,2.36358159453128,2.29545998482612,3.30887128679273,3.01428186306548 | |||
|short_description=p3@Rap1gap | |||
}} |
Revision as of 00:23, 5 August 2015
Short description: | p3@Rap1gap |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_3_at_Rap1gap_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENSMUST00000047243, NM_001081155, uc008vjn.1, uc008vjo.1_5end |
EntrezGene: | 110351 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neuron | 4.24e-13 | 33 |
neuronal stem cell | 4.24e-13 | 33 |
neuroblast | 4.24e-13 | 33 |
electrically signaling cell | 4.24e-13 | 33 |
ectodermal cell | 2.01e-11 | 44 |
neurectodermal cell | 2.01e-11 | 44 |
neural cell | 1.08e-10 | 43 |
CNS neuron (sensu Vertebrata) | 1.30e-10 | 23 |
neuroblast (sensu Vertebrata) | 1.30e-10 | 23 |
electrically responsive cell | 1.92e-09 | 39 |
electrically active cell | 1.92e-09 | 39 |