FFCP PHASE1:Mm9::chr4:151235776..151235788,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP|EntrezGene=100072|HGNC=|UniProt=|association_with_transcript=-17bp_to_ENSMUST00000155685_5end|description=CAGE_peak_5_at_Camta1_5end|id=chr4:151235776..151235788,-|ontology_enrichment_celltype=CL:0000117!1.92e-08!23;CL:0000337!1.92e-08!23|ontology_enrichment_celltype_v019_2=CL:0000117,1.98e-07,23;CL:0000337,1.98e-07,23|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002020!8.71e-10!34;UBERON:0001049!1.57e-09!52;UBERON:0005068!1.57e-09!52;UBERON:0006241!1.57e-09!52;UBERON:0007135!1.57e-09!52;UBERON:0001017!2.00e-08!73;UBERON:0005743!2.00e-08!73;UBERON:0000073!1.00e-07!75;UBERON:0001016!1.00e-07!75;UBERON:0000955!1.62e-07!50;UBERON:0006238!1.62e-07!50;UBERON:0003080!1.84e-07!40;UBERON:0002616!2.14e-07!49;UBERON:0000025!2.56e-07!114;UBERON:0002780!3.39e-07!39;UBERON:0001890!3.39e-07!39;UBERON:0006240!3.39e-07!39;UBERON:0000033!3.93e-07!63;UBERON:0002791!4.69e-07!29;UBERON:0003528!4.69e-07!29;UBERON:0001893!4.69e-07!29;UBERON:0003056!5.37e-07!49|ontology_enrichment_uberon_v019_2=UBERON:0010314,9.26e-13,92;UBERON:0000073,7.92e-10,54;UBERON:0001017,9.86e-10,73;UBERON:0001049,1.03e-09,52;UBERON:0005068,1.03e-09,52;UBERON:0006241,1.03e-09,52;UBERON:0007135,1.03e-09,52;UBERON:0002020,2.62e-09,34;UBERON:0001016,3.86e-09,75;UBERON:0007100,3.36e-08,18;UBERON:0000948,3.36e-08,18;UBERON:0005498,3.36e-08,18;UBERON:0004140,3.36e-08,18;UBERON:0009881,3.36e-08,18;UBERON:0004141,3.36e-08,18;UBERON:0003084,3.36e-08,18;UBERON:0007005,3.36e-08,18;UBERON:0004139,3.36e-08,18;UBERON:0004291,3.36e-08,18;UBERON:0002346,6.79e-08,64;UBERON:0003075,6.79e-08,64;UBERON:0007284,6.79e-08,64;UBERON:0002240,5.10e-07,6;UBERON:0005174,5.10e-07,6;UBERON:0001137,5.10e-07,6;UBERON:0010371,6.33e-07,73;UBERON:0004111,8.97e-07,122;UBERON:0004121,9.14e-07,95;UBERON:0000924,9.14e-07,95;UBERON:0006601,9.14e-07,95;UBERON:0000025,9.40e-07,114|phase1_expression=1.60148847104794,0,0,0,0,0,0.233612640595526,1.03298658753261,1.267098499365,0.234064526321993,1.36974374580404,0.558405112967355,0.513602189793617,0.699363219351979,0.333109761815663,0,0.699561878128147,0.315462165358238,0.959801035240171,0.42438965179803,1.53077922271926,1.19149141441062,1.56719873483361,0.159992422793407,0.22940928106717,0,0,0,0.190023419456374,0,0.443461021310609,0,0,0,0,0.498703936075477,0,0.418531630736908,0,0.523523743973798,0,0.683045484958446,0.485510353031154,0.125896817975577,0,0,0,0.218025156380447,1.09843091367236,0.58328969722285,0.279972843250725,1.43752564364972,1.00669563634642,0.725362142011344,0.336093799142464,0.257259436035947,0.573066879877513,0.515672092277442,2.02316460859598,1.05798195854407,1.90149421051854,1.0165335962074,0,0.449949858640699,1.97773272513395,0,0.599200221036809,1.53687322128622,1.03689612308478,0.945041568321835,0.630974884054146,4.85606673486466,3.3130281142742,0.979926393719632,0.958454710182364,0.919218786610021,2.20231761998777,1.65993539510744,0.768032666281217,1.71452174049252,2.92760459527711,2.6045668527838,0.837548997004143,3.37657566019008,1.5279824777681,2.65165726926301,4.6982654663704,2.23679334990361,0.227178579999552,0.302286240427142,0.869593466105033,0.860423876981386,0.679971333707751,0,0,0.448026887097336,0.421333260395256,0.170430322578058,0,1.06001872353102,1.69012103732017,0,0,0,0.216491041011214,0.253359865475099,0.505524445014783,0.91347103775248,0.776813650941515,0.445326417194474,0.173485326766136,0,0,0.452167921657868,0.587943535678524,0.125666591329675,0.988779870937496,1.01219549843938,0.884610551949874,1.94120219936891,0.441683036920787,0.969750506270444,0,0.292780797011547,1.67557365450764,0,2.87556298814209,3.59941638596045,2.92261522268049,1.3481157546434,1.83000241127451,1.7591609295801,1.04294592115366,1.27857728665165,1.66230435647648,1.78465389374533,0.81471491080253,0.373220911830279,1.51633655060205,0.420883711772948,0.650602214813519,0.229902104433473,0.720248519221397,1.05493372485001,1.7009124787832,1.40925092313335,0.468508622798644,0.776110112217047,0.862271971731369,1.32374256117473,0.879755620819744,0.43839146485515,0.834141747676794,0.696504333044333,0.823128545631774,0.59710280045548,1.40442637462647,2.05878325691772,3.12579849335152,1.44988040774851,0.469052119962192,1.44049649168812,1.42046841351126,1.57411385397923,1.54267112887378,1.39520366850245,3.75582761959467,4.43708300995244,3.12663714835613,4.59668899421467,4.37771571547621,4.09359964790931,2.63460138349261,2.54992195644706,1.68231958851302,1.44066457330998,0,0,1.2797295032114,0.696710015581316,0.902072229254653,1.00841762311671,0.22237804384487,0.380451252225118,0,0.658795818896044,0.754005626400808,0.397912944082302,0.58489226135736,0.898819408654221,0.432276099749388,0.199141273254367,0.379335801906163,0.799739588268102,0,0.814605311381257,0.193952487167626,1.1221731182451,0.885311519739602,0.885660887877613,0.941992367048249,0.370191491765402,0.296452627087149,0.667380422864376,0.589676985339609,0.899448449539415,0,0.241177159752417,0.50925170356284,0.287696137450811,0.324270453550071,0.274561413188081,0,0.744281895337007,0.624075346229121,0.757736633841335,0.358794827043824,0,0.554259570499814,0.37898282354097,0.977789858652155,0.678980343100753,0.469380496577004,0.502518772325447,0.476087281772027,3.51240566144038,0.472905432318573,1.32878813789265,0.478364305972461,0.655453258862952,0.863424909329478,0.867894351489069,0,1.08781136763742,0,0,0.80275294993896,1.99259867206745,0.163934945376675,1.26235463602186,0,0,0.430846795465598,0.238968797952552,0.891194696329576,0,0,0,1.18586333383957,0.963963949265421,0.851640511249612,0.712262414669021,1.79175655288934,0.824850614862677,0,1.69946445308487,1.209294227859,0.565815239267694,0.295301892880773,0.614870295887855,0.516856586336442,0.363533729477506,0,0.948110273807448,0,0,0,0.720244376125241,0.388076051348264,1.28602221018955,1.24138163549592,0.891844088010353,0.658196082408484,1.2178597964584,0.23467170806371,0,0,0.65954501176592,0.484393280087717,0.542816324353403,0.477489376012546,0.328281799490123,0,2.41052892613663,0.683483523191411,0.206386867963223,0.740778109478847,0.376736914009382,0.546776910884101,0,1.5298058699447,2.09927178485487,2.62579950228405,0,0.632671987162271,0.813277868507395,0.540026704109006,0.627264888043406,0,0.539457385539283,0.826534557253359,0,0.259229946583586,0,3.38215763210514,0.149516546043979,0.330916980914195,0.777804753376191,0.904118764344118,1.01373675294467,0.821500670520278,0.651021924219751,0.838874755405687,2.65742532908607,2.59227005632079,0,0.405450430580328,1.02710957164827,0.649604114888975,0.358053391334963,0.993406773906324,0.721172697119813,0.886137163047463,1.51449674922221,1.37172251979,0.806609481094724,0.487289403698762,0.865906574762965,0.818138315270983,0.453460767230423,0.443971906748129,0.448569283047378,0.335769232728157,0.19318959403219,0.750729901804728,0,0.214368379079066,1.00314420807073,1.12950368523413,1.38097570952153,2.29158205375759,1.71853182343688,0.685082519770642,1.5107877947794,0.675022500231806,0.45032120322422,1.35942722695261,1.55328093525546,0.62272408550506,0.798049746802062,0.341467211508268,0.729320151204882,0.209613162627982,0.183843508450014,0.44449345560323,0,0.320919209591815,0.505394423527595,1.01391719956096,0.188626341386076,0.842773567228942,0.89635213366817,1.32101578597911,1.42888107384922,0.579421629724277,0.964546102318525,1.64834360321323,0.883193520806384,1.02860775715625,1.06485483695602,0.953744759789284,0.581385666529314,0.376437521661322,0.338458431566706,0.365855945745545,1.05227884575137,0.679020569229309,1.12228454331548,0.949080144993393,1.37906275325789,1.22769312950907,0.77468420592983,0.964533054905707,0.249810577937946,1.40358965067245,1.50409737833809,3.06061331310149,1.10295709559758,0.927471342481686|short_description=p5@Camta1}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=entrezgene:100072 | |||
|HGNC= | |||
|TSSclassifier=NA | |||
|UniProt= | |||
|association_with_transcript=-17bp_to_ENSMUST00000155685_5end | |||
|cluster_id=chr4:151235776..151235788,- | |||
|description=CAGE_peak_5_at_Camta1_5end | |||
|id=chr4:151235776..151235788,- | |||
|ontology_enrichment_celltype=CL:0000117!1.92e-08!23;CL:0000337!1.92e-08!23 | |||
|ontology_enrichment_celltype_v019_2=CL:0000117,1.98e-07,23;CL:0000337,1.98e-07,23 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002020!8.71e-10!34;UBERON:0001049!1.57e-09!52;UBERON:0005068!1.57e-09!52;UBERON:0006241!1.57e-09!52;UBERON:0007135!1.57e-09!52;UBERON:0001017!2.00e-08!73;UBERON:0005743!2.00e-08!73;UBERON:0000073!1.00e-07!75;UBERON:0001016!1.00e-07!75;UBERON:0000955!1.62e-07!50;UBERON:0006238!1.62e-07!50;UBERON:0003080!1.84e-07!40;UBERON:0002616!2.14e-07!49;UBERON:0000025!2.56e-07!114;UBERON:0002780!3.39e-07!39;UBERON:0001890!3.39e-07!39;UBERON:0006240!3.39e-07!39;UBERON:0000033!3.93e-07!63;UBERON:0002791!4.69e-07!29;UBERON:0003528!4.69e-07!29;UBERON:0001893!4.69e-07!29;UBERON:0003056!5.37e-07!49 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0010314,9.26e-13,92;UBERON:0000073,7.92e-10,54;UBERON:0001017,9.86e-10,73;UBERON:0001049,1.03e-09,52;UBERON:0005068,1.03e-09,52;UBERON:0006241,1.03e-09,52;UBERON:0007135,1.03e-09,52;UBERON:0002020,2.62e-09,34;UBERON:0001016,3.86e-09,75;UBERON:0007100,3.36e-08,18;UBERON:0000948,3.36e-08,18;UBERON:0005498,3.36e-08,18;UBERON:0004140,3.36e-08,18;UBERON:0009881,3.36e-08,18;UBERON:0004141,3.36e-08,18;UBERON:0003084,3.36e-08,18;UBERON:0007005,3.36e-08,18;UBERON:0004139,3.36e-08,18;UBERON:0004291,3.36e-08,18;UBERON:0002346,6.79e-08,64;UBERON:0003075,6.79e-08,64;UBERON:0007284,6.79e-08,64;UBERON:0002240,5.10e-07,6;UBERON:0005174,5.10e-07,6;UBERON:0001137,5.10e-07,6;UBERON:0010371,6.33e-07,73;UBERON:0004111,8.97e-07,122;UBERON:0004121,9.14e-07,95;UBERON:0000924,9.14e-07,95;UBERON:0006601,9.14e-07,95;UBERON:0000025,9.40e-07,114 | |||
|phase1_expression=1.60148847104794,0,0,0,0,0,0.233612640595526,1.03298658753261,1.267098499365,0.234064526321993,1.36974374580404,0.558405112967355,0.513602189793617,0.699363219351979,0.333109761815663,0,0.699561878128147,0.315462165358238,0.959801035240171,0.42438965179803,1.53077922271926,1.19149141441062,1.56719873483361,0.159992422793407,0.22940928106717,0,0,0,0.190023419456374,0,0.443461021310609,0,0,0,0,0.498703936075477,0,0.418531630736908,0,0.523523743973798,0,0.683045484958446,0.485510353031154,0.125896817975577,0,0,0,0.218025156380447,1.09843091367236,0.58328969722285,0.279972843250725,1.43752564364972,1.00669563634642,0.725362142011344,0.336093799142464,0.257259436035947,0.573066879877513,0.515672092277442,2.02316460859598,1.05798195854407,1.90149421051854,1.0165335962074,0,0.449949858640699,1.97773272513395,0,0.599200221036809,1.53687322128622,1.03689612308478,0.945041568321835,0.630974884054146,4.85606673486466,3.3130281142742,0.979926393719632,0.958454710182364,0.919218786610021,2.20231761998777,1.65993539510744,0.768032666281217,1.71452174049252,2.92760459527711,2.6045668527838,0.837548997004143,3.37657566019008,1.5279824777681,2.65165726926301,4.6982654663704,2.23679334990361,0.227178579999552,0.302286240427142,0.869593466105033,0.860423876981386,0.679971333707751,0,0,0.448026887097336,0.421333260395256,0.170430322578058,0,1.06001872353102,1.69012103732017,0,0,0,0.216491041011214,0.253359865475099,0.505524445014783,0.91347103775248,0.776813650941515,0.445326417194474,0.173485326766136,0,0,0.452167921657868,0.587943535678524,0.125666591329675,0.988779870937496,1.01219549843938,0.884610551949874,1.94120219936891,0.441683036920787,0.969750506270444,0,0.292780797011547,1.67557365450764,0,2.87556298814209,3.59941638596045,2.92261522268049,1.3481157546434,1.83000241127451,1.7591609295801,1.04294592115366,1.27857728665165,1.66230435647648,1.78465389374533,0.81471491080253,0.373220911830279,1.51633655060205,0.420883711772948,0.650602214813519,0.229902104433473,0.720248519221397,1.05493372485001,1.7009124787832,1.40925092313335,0.468508622798644,0.776110112217047,0.862271971731369,1.32374256117473,0.879755620819744,0.43839146485515,0.834141747676794,0.696504333044333,0.823128545631774,0.59710280045548,1.40442637462647,2.05878325691772,3.12579849335152,1.44988040774851,0.469052119962192,1.44049649168812,1.42046841351126,1.57411385397923,1.54267112887378,1.39520366850245,3.75582761959467,4.43708300995244,3.12663714835613,4.59668899421467,4.37771571547621,4.09359964790931,2.63460138349261,2.54992195644706,1.68231958851302,1.44066457330998,0,0,1.2797295032114,0.696710015581316,0.902072229254653,1.00841762311671,0.22237804384487,0.380451252225118,0,0.658795818896044,0.754005626400808,0.397912944082302,0.58489226135736,0.898819408654221,0.432276099749388,0.199141273254367,0.379335801906163,0.799739588268102,0,0.814605311381257,0.193952487167626,1.1221731182451,0.885311519739602,0.885660887877613,0.941992367048249,0.370191491765402,0.296452627087149,0.667380422864376,0.589676985339609,0.899448449539415,0,0.241177159752417,0.50925170356284,0.287696137450811,0.324270453550071,0.274561413188081,0,0.744281895337007,0.624075346229121,0.757736633841335,0.358794827043824,0,0.554259570499814,0.37898282354097,0.977789858652155,0.678980343100753,0.469380496577004,0.502518772325447,0.476087281772027,3.51240566144038,0.472905432318573,1.32878813789265,0.478364305972461,0.655453258862952,0.863424909329478,0.867894351489069,0,1.08781136763742,0,0,0.80275294993896,1.99259867206745,0.163934945376675,1.26235463602186,0,0,0.430846795465598,0.238968797952552,0.891194696329576,0,0,0,1.18586333383957,0.963963949265421,0.851640511249612,0.712262414669021,1.79175655288934,0.824850614862677,0,1.69946445308487,1.209294227859,0.565815239267694,0.295301892880773,0.614870295887855,0.516856586336442,0.363533729477506,0,0.948110273807448,0,0,0,0.720244376125241,0.388076051348264,1.28602221018955,1.24138163549592,0.891844088010353,0.658196082408484,1.2178597964584,0.23467170806371,0,0,0.65954501176592,0.484393280087717,0.542816324353403,0.477489376012546,0.328281799490123,0,2.41052892613663,0.683483523191411,0.206386867963223,0.740778109478847,0.376736914009382,0.546776910884101,0,1.5298058699447,2.09927178485487,2.62579950228405,0,0.632671987162271,0.813277868507395,0.540026704109006,0.627264888043406,0,0.539457385539283,0.826534557253359,0,0.259229946583586,0,3.38215763210514,0.149516546043979,0.330916980914195,0.777804753376191,0.904118764344118,1.01373675294467,0.821500670520278,0.651021924219751,0.838874755405687,2.65742532908607,2.59227005632079,0,0.405450430580328,1.02710957164827,0.649604114888975,0.358053391334963,0.993406773906324,0.721172697119813,0.886137163047463,1.51449674922221,1.37172251979,0.806609481094724,0.487289403698762,0.865906574762965,0.818138315270983,0.453460767230423,0.443971906748129,0.448569283047378,0.335769232728157,0.19318959403219,0.750729901804728,0,0.214368379079066,1.00314420807073,1.12950368523413,1.38097570952153,2.29158205375759,1.71853182343688,0.685082519770642,1.5107877947794,0.675022500231806,0.45032120322422,1.35942722695261,1.55328093525546,0.62272408550506,0.798049746802062,0.341467211508268,0.729320151204882,0.209613162627982,0.183843508450014,0.44449345560323,0,0.320919209591815,0.505394423527595,1.01391719956096,0.188626341386076,0.842773567228942,0.89635213366817,1.32101578597911,1.42888107384922,0.579421629724277,0.964546102318525,1.64834360321323,0.883193520806384,1.02860775715625,1.06485483695602,0.953744759789284,0.581385666529314,0.376437521661322,0.338458431566706,0.365855945745545,1.05227884575137,0.679020569229309,1.12228454331548,0.949080144993393,1.37906275325789,1.22769312950907,0.77468420592983,0.964533054905707,0.249810577937946,1.40358965067245,1.50409737833809,3.06061331310149,1.10295709559758,0.927471342481686 | |||
|short_description=p5@Camta1 | |||
}} |
Revision as of 05:51, 5 August 2015
Short description: | p5@Camta1 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_5_at_Camta1_5end |
Coexpression cluster: | NA |
Association with transcript: | -17bp_to_ENSMUST00000155685_5end |
EntrezGene: | 100072 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 1.98e-07 | 23 |
neuroblast (sensu Vertebrata) | 1.98e-07 | 23 |
Ontology term | p-value | n |
---|---|---|
structure with developmental contribution from neural crest | 9.26e-13 | 92 |
regional part of nervous system | 7.92e-10 | 54 |
central nervous system | 9.86e-10 | 73 |
neural tube | 1.03e-09 | 52 |
neural rod | 1.03e-09 | 52 |
future spinal cord | 1.03e-09 | 52 |
neural keel | 1.03e-09 | 52 |
gray matter | 2.62e-09 | 34 |
nervous system | 3.86e-09 | 75 |
primary circulatory organ | 3.36e-08 | 18 |
heart | 3.36e-08 | 18 |
primitive heart tube | 3.36e-08 | 18 |
primary heart field | 3.36e-08 | 18 |
anterior lateral plate mesoderm | 3.36e-08 | 18 |
heart tube | 3.36e-08 | 18 |
heart primordium | 3.36e-08 | 18 |
cardiac mesoderm | 3.36e-08 | 18 |
cardiogenic plate | 3.36e-08 | 18 |
heart rudiment | 3.36e-08 | 18 |
neurectoderm | 6.79e-08 | 64 |
neural plate | 6.79e-08 | 64 |
presumptive neural plate | 6.79e-08 | 64 |
spinal cord | 5.10e-07 | 6 |
dorsal region element | 5.10e-07 | 6 |
dorsum | 5.10e-07 | 6 |
ecto-epithelium | 6.33e-07 | 73 |
anatomical conduit | 8.97e-07 | 122 |
ectoderm-derived structure | 9.14e-07 | 95 |
ectoderm | 9.14e-07 | 95 |
presumptive ectoderm | 9.14e-07 | 95 |
tube | 9.40e-07 | 114 |