FFCP PHASE1:Mm9::chr4:68615385..68615431,-: Difference between revisions
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{{FFCP|EntrezGene=56710|HGNC=|MCL_coexpression_id=2|UniProt=Q920P3|association_with_transcript=0bp_to_ENSMUST00000030036,NM_019967,uc008thw.1,uc008thx.1_5end|description=CAGE_peak_1_at_Dbc1_5end|id=chr4:68615385..68615431,-|ontology_enrichment_celltype=CL:0000117!1.60e-12!23;CL:0000337!1.60e-12!23;CL:0000540!8.82e-12!33;CL:0000047!8.82e-12!33;CL:0000031!8.82e-12!33;CL:0000404!8.82e-12!33;CL:0000221!1.65e-09!44;CL:0000133!1.65e-09!44;CL:0002319!2.50e-09!43;CL:0000393!2.91e-09!39;CL:0000211!2.91e-09!39;CL:0000055!4.43e-07!50|ontology_enrichment_celltype_v019_2=CL:0000117,1.89e-13,23;CL:0000337,1.89e-13,23;CL:0000540,2.50e-12,33;CL:0000047,2.50e-12,33;CL:0000031,2.50e-12,33;CL:0000404,2.50e-12,33;CL:0000221,9.59e-10,44;CL:0000133,9.59e-10,44;CL:0002319,1.50e-09,43;CL:0000393,2.85e-09,39;CL:0000211,2.85e-09,39|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001017!2.67e-27!73;UBERON:0005743!2.67e-27!73;UBERON:0000073!8.92e-27!75;UBERON:0001016!8.92e-27!75;UBERON:0001049!5.48e-25!52;UBERON:0005068!5.48e-25!52;UBERON:0006241!5.48e-25!52;UBERON:0007135!5.48e-25!52;UBERON:0002346!2.00e-24!71;UBERON:0003075!2.00e-24!71;UBERON:0007284!2.00e-24!71;UBERON:0000955!8.38e-24!50;UBERON:0006238!8.38e-24!50;UBERON:0002616!4.25e-23!49;UBERON:0004121!1.21e-22!102;UBERON:0000924!1.21e-22!102;UBERON:0006601!1.21e-22!102;UBERON:0000033!8.40e-22!63;UBERON:0003080!1.63e-19!40;UBERON:0003056!2.65e-19!49;UBERON:0002780!6.59e-19!39;UBERON:0001890!6.59e-19!39;UBERON:0006240!6.59e-19!39;UBERON:0002020!1.11e-18!34;UBERON:0002791!1.25e-15!29;UBERON:0003528!1.25e-15!29;UBERON:0001893!1.25e-15!29;UBERON:0000153!2.89e-12!94;UBERON:0000956!2.99e-11!21;UBERON:0001869!2.99e-11!21;UBERON:0000203!2.99e-11!21;UBERON:0007811!3.50e-11!86;UBERON:0000025!1.29e-10!114;UBERON:0002619!8.58e-10!17;UBERON:0004111!3.55e-09!122;UBERON:0000468!1.77e-08!333;UBERON:0002021!2.36e-08!10;UBERON:0000411!2.36e-08!10;UBERON:0001950!2.36e-08!10|ontology_enrichment_uberon_v019_2=UBERON:0001017,7.55e-29,73;UBERON:0001016,2.72e-28,75;UBERON:0000073,5.95e-28,54;UBERON:0001049,1.93e-26,52;UBERON:0005068,1.93e-26,52;UBERON:0006241,1.93e-26,52;UBERON:0007135,1.93e-26,52;UBERON:0002346,2.13e-26,64;UBERON:0003075,2.13e-26,64;UBERON:0007284,2.13e-26,64;UBERON:0004121,2.27e-23,95;UBERON:0000924,2.27e-23,95;UBERON:0006601,2.27e-23,95;UBERON:0000955,4.37e-23,47;UBERON:0006238,4.37e-23,47;UBERON:0002616,2.44e-22,46;UBERON:0010371,2.74e-22,73;UBERON:0003080,4.92e-21,40;UBERON:0003056,8.36e-21,49;UBERON:0002780,2.24e-20,39;UBERON:0001890,2.24e-20,39;UBERON:0006240,2.24e-20,39;UBERON:0002020,3.95e-20,34;UBERON:0010314,8.99e-19,92;UBERON:0003528,8.12e-17,29;UBERON:0002791,8.12e-17,29;UBERON:0001893,8.12e-17,29;UBERON:0000956,4.53e-12,21;UBERON:0001869,4.53e-12,21;UBERON:0000203,4.53e-12,21;UBERON:0002619,1.73e-10,17;UBERON:0000025,5.60e-10,114;UBERON:0002021,6.27e-09,10;UBERON:0000411,6.27e-09,10;UBERON:0001950,6.27e-09,10;UBERON:0004111,1.18e-08,122|phase1_expression=2.5623815536767,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,14.8825757764372,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.125896817975577,0.101376931219515,0,1.56478268869608,0.872100625521786,1.5378032791413,1.94429899074283,1.1198913730029,0,0,0,0,1.54355661621568,0.85960031981627,2.57836046138721,24.6826082248709,24.8625760257855,20.2826049121977,0.338844532069132,0,0.899899717281399,1.97773272513395,0,2.39680088414724,1.53687322128622,8.91730665852908,10.9354810048669,10.3059231062177,57.7014988495683,60.2971116797905,16.1687854963739,16.8688028992096,17.4651569455904,50.6533052597188,59.5022995476975,61.2890067692411,33.6310033711994,40.5290261158675,30.7338888628488,32.1060448851588,30.3891809417107,39.5747461741938,73.3625177829433,63.4977696363999,42.3126742023432,1.13589289999776,1.51143120213571,0.289864488701678,0,0,0.539703191637817,0,0,2.10666630197628,0.170430322578058,0.519572009205738,0,7.18301440861071,0,0,0,0,0,0,1.82694207550496,0.776813650941515,0.29688427812965,6.07198643681475,7.00270600117925,5.76538743140146,3.61734337326294,4.58595957829249,0.753999547978053,0.247194967734374,0,0,0.647067399789637,0,0,0,88.7125814944988,90.8998707570395,0,0,0,0,55.1229553009748,92.8726223721812,45.6125298169698,115.940821568248,159.055014459466,70.0245710165718,78.0380475355914,2.54598409625791,0,0.252722758433675,1.68353484709179,1.69156575851515,2.06911893990126,1.62055916824814,4.82255417074288,6.87168641428411,9.22418786050918,8.05834831213668,7.50239775143145,1.5089759505299,8.13156144721623,10.205165201509,6.1374805079721,13.0682207136031,4.52727816478817,4.7329891373827,5.7719937377363,0,0,0,1.65700618028402,2.34526059981096,3.24111710629827,3.78791576936336,1.96764231747404,3.08534225774756,1.39520366850245,1.3413670069981,0.583826711835847,0.658239399653922,0,0.162137619091711,0,0.219550115291051,0.134206418760372,110.612512944731,19.1402579025469,0,0,8.10495352033889,13.237490296045,6.44337306610467,2.62188582010345,2.89091456998331,2.28270751335071,0.949058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| {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=entrezgene:56710 | |||
|HGNC= | |||
|MCL_coexpression_id=2 | |||
|TSSclassifier=NA | |||
|UniProt=uniprot:Q920P3 | |||
|association_with_transcript=0bp_to_ENSMUST00000030036,NM_019967,uc008thw.1,uc008thx.1_5end | |||
|cluster_id=chr4:68615385..68615431,- | |||
|description=CAGE_peak_1_at_Dbc1_5end | |||
|id=chr4:68615385..68615431,- | |||
|ontology_enrichment_celltype=CL:0000117!1.60e-12!23;CL:0000337!1.60e-12!23;CL:0000540!8.82e-12!33;CL:0000047!8.82e-12!33;CL:0000031!8.82e-12!33;CL:0000404!8.82e-12!33;CL:0000221!1.65e-09!44;CL:0000133!1.65e-09!44;CL:0002319!2.50e-09!43;CL:0000393!2.91e-09!39;CL:0000211!2.91e-09!39;CL:0000055!4.43e-07!50 | |||
|ontology_enrichment_celltype_v019_2=CL:0000117,1.89e-13,23;CL:0000337,1.89e-13,23;CL:0000540,2.50e-12,33;CL:0000047,2.50e-12,33;CL:0000031,2.50e-12,33;CL:0000404,2.50e-12,33;CL:0000221,9.59e-10,44;CL:0000133,9.59e-10,44;CL:0002319,1.50e-09,43;CL:0000393,2.85e-09,39;CL:0000211,2.85e-09,39 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!2.67e-27!73;UBERON:0005743!2.67e-27!73;UBERON:0000073!8.92e-27!75;UBERON:0001016!8.92e-27!75;UBERON:0001049!5.48e-25!52;UBERON:0005068!5.48e-25!52;UBERON:0006241!5.48e-25!52;UBERON:0007135!5.48e-25!52;UBERON:0002346!2.00e-24!71;UBERON:0003075!2.00e-24!71;UBERON:0007284!2.00e-24!71;UBERON:0000955!8.38e-24!50;UBERON:0006238!8.38e-24!50;UBERON:0002616!4.25e-23!49;UBERON:0004121!1.21e-22!102;UBERON:0000924!1.21e-22!102;UBERON:0006601!1.21e-22!102;UBERON:0000033!8.40e-22!63;UBERON:0003080!1.63e-19!40;UBERON:0003056!2.65e-19!49;UBERON:0002780!6.59e-19!39;UBERON:0001890!6.59e-19!39;UBERON:0006240!6.59e-19!39;UBERON:0002020!1.11e-18!34;UBERON:0002791!1.25e-15!29;UBERON:0003528!1.25e-15!29;UBERON:0001893!1.25e-15!29;UBERON:0000153!2.89e-12!94;UBERON:0000956!2.99e-11!21;UBERON:0001869!2.99e-11!21;UBERON:0000203!2.99e-11!21;UBERON:0007811!3.50e-11!86;UBERON:0000025!1.29e-10!114;UBERON:0002619!8.58e-10!17;UBERON:0004111!3.55e-09!122;UBERON:0000468!1.77e-08!333;UBERON:0002021!2.36e-08!10;UBERON:0000411!2.36e-08!10;UBERON:0001950!2.36e-08!10 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001017,7.55e-29,73;UBERON:0001016,2.72e-28,75;UBERON:0000073,5.95e-28,54;UBERON:0001049,1.93e-26,52;UBERON:0005068,1.93e-26,52;UBERON:0006241,1.93e-26,52;UBERON:0007135,1.93e-26,52;UBERON:0002346,2.13e-26,64;UBERON:0003075,2.13e-26,64;UBERON:0007284,2.13e-26,64;UBERON:0004121,2.27e-23,95;UBERON:0000924,2.27e-23,95;UBERON:0006601,2.27e-23,95;UBERON:0000955,4.37e-23,47;UBERON:0006238,4.37e-23,47;UBERON:0002616,2.44e-22,46;UBERON:0010371,2.74e-22,73;UBERON:0003080,4.92e-21,40;UBERON:0003056,8.36e-21,49;UBERON:0002780,2.24e-20,39;UBERON:0001890,2.24e-20,39;UBERON:0006240,2.24e-20,39;UBERON:0002020,3.95e-20,34;UBERON:0010314,8.99e-19,92;UBERON:0003528,8.12e-17,29;UBERON:0002791,8.12e-17,29;UBERON:0001893,8.12e-17,29;UBERON:0000956,4.53e-12,21;UBERON:0001869,4.53e-12,21;UBERON:0000203,4.53e-12,21;UBERON:0002619,1.73e-10,17;UBERON:0000025,5.60e-10,114;UBERON:0002021,6.27e-09,10;UBERON:0000411,6.27e-09,10;UBERON:0001950,6.27e-09,10;UBERON:0004111,1.18e-08,122 | |||
|phase1_expression=2.5623815536767,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,14.8825757764372,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.125896817975577,0.101376931219515,0,1.56478268869608,0.872100625521786,1.5378032791413,1.94429899074283,1.1198913730029,0,0,0,0,1.54355661621568,0.85960031981627,2.57836046138721,24.6826082248709,24.8625760257855,20.2826049121977,0.338844532069132,0,0.899899717281399,1.97773272513395,0,2.39680088414724,1.53687322128622,8.91730665852908,10.9354810048669,10.3059231062177,57.7014988495683,60.2971116797905,16.1687854963739,16.8688028992096,17.4651569455904,50.6533052597188,59.5022995476975,61.2890067692411,33.6310033711994,40.5290261158675,30.7338888628488,32.1060448851588,30.3891809417107,39.5747461741938,73.3625177829433,63.4977696363999,42.3126742023432,1.13589289999776,1.51143120213571,0.289864488701678,0,0,0.539703191637817,0,0,2.10666630197628,0.170430322578058,0.519572009205738,0,7.18301440861071,0,0,0,0,0,0,1.82694207550496,0.776813650941515,0.29688427812965,6.07198643681475,7.00270600117925,5.76538743140146,3.61734337326294,4.58595957829249,0.753999547978053,0.247194967734374,0,0,0.647067399789637,0,0,0,88.7125814944988,90.8998707570395,0,0,0,0,55.1229553009748,92.8726223721812,45.6125298169698,115.940821568248,159.055014459466,70.0245710165718,78.0380475355914,2.54598409625791,0,0.252722758433675,1.68353484709179,1.69156575851515,2.06911893990126,1.62055916824814,4.82255417074288,6.87168641428411,9.22418786050918,8.05834831213668,7.50239775143145,1.5089759505299,8.13156144721623,10.205165201509,6.1374805079721,13.0682207136031,4.52727816478817,4.7329891373827,5.7719937377363,0,0,0,1.65700618028402,2.34526059981096,3.24111710629827,3.78791576936336,1.96764231747404,3.08534225774756,1.39520366850245,1.3413670069981,0.583826711835847,0.658239399653922,0,0.162137619091711,0,0.219550115291051,0.134206418760372,110.612512944731,19.1402579025469,0,0,8.10495352033889,13.237490296045,6.44337306610467,2.62188582010345,2.89091456998331,2.28270751335071,0.949058123089023,0.823494773620054,1.00534083520108,1.1937388322469,0.779856348476481,0.898819408654221,0,0.398282546508734,6.63837653335786,4.91268604221834,3.38123207019241,3.46207257337034,2.32742984601151,2.59502533594179,2.08680572510049,0.147610147979602,0.31399745568275,0.370191491765402,0,2.33583148002532,1.96558995113203,0.449724224769707,0.608580364165509,0.482354319504834,1.01850340712568,0.287696137450811,0.486405680325106,0,0,1.11642284300551,0.312037673114561,0,0,0,1.29327233116623,8.52711352967181,11.2445833744998,10.863685489612,13.6120344007331,15.9130944569725,14.0445748122748,7.02481132288076,14.3447981136634,13.2878813789265,9.72674088810671,1.80249646187312,2.76295970985433,1.88043776155965,0,0,0,0.275936746304732,34.0367250774119,36.2184111569908,3.27869890753351,0.252470927204373,2.52406575533005,4.68526493155966,4.30846795465598,0.477937595905104,2.45078541490634,1.98153571552183,5.26253912177363,9.64444331107329,8.69633111482352,107.642641001305,0,5.52003371368491,5.86393053672874,0.659880491890142,0,2.18502572539483,0.906970670894253,0.565815239267694,0.590603785761546,1.53717573971964,1.03371317267288,0.727067458955011,1.06949213515416,1.26414703174326,0,0,19.0646179222121,6.48219938512717,3.88076051348264,7.50179622610573,17.7340233642274,14.8046118609719,12.3411765451591,7.00269382963578,0.23467170806371,0,0.220528398054962,0,3.71368181400583,1.68876189798836,0.477489376012546,0.656563598980245,0,26.8866687915239,0,1.03193433981611,0.555583582109135,0,0.136694227721025,0,0,0,0,0,20.2455035891927,6.30290348093231,4.96824567780286,1.88179466413022,3.05707589244649,2.02296519577231,1.1571483801547,0,0,0,0,1.34564891439581,0.330916980914195,0.972255941720238,1.16243841129958,0.844780627453891,0.938857909166032,0.39061315453185,0.419437377702843,0,0,0.316011120628178,6.89265731986558,4.00572732942826,0.909445760844565,0.895133478337407,0.198681354781265,0.240390899039938,0.443068581523732,0.100966449948148,0.228620419965,0.403304740547362,0.487289403698762,0.0962118416403295,0.467507608726276,0,0,0,0.167884616364078,1.54551675225752,0.187682475451182,0,0.214368379079066,0,251.314569964595,256.401156734498,244.626384238622,169.447237790876,206.209838450963,214.531866858675,166.055535057024,170.67173602198,175.366112276887,200.373240647954,3.63255716544618,8.37952234142165,12.8050204315601,11.1829089851415,5.44994222832754,6.80220981265052,10.2233494788743,11.3319281481392,12.194929964489,9.34979683526051,8.36481689637791,10.3744487762342,8.70866019469906,9.15559679389631,9.59172331558742,8.09699275181225,8.80720877180902,6.17309505483856,7.82963211526283,11.3343168503486,9.60033906679163,9.05126611412621,6.67621331852499,8.57543858130738,9.2227192807024,10.4922113785679,8.59761472502031,9.73357932320019,9.37048385536446,10.661703161497,12.1007718486658,8.86540341380071,5.72923460437565,8.2116525828562,8.48789088317022,17.7365510335942,8.18760629558929,7.95022899978704,3.44318997723918,3.75005412503176,1.391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| |||
|short_description=p1@Dbc1 | |||
}} |
Revision as of 17:08, 5 August 2015
Short description: | p1@Dbc1 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Dbc1_5end |
Coexpression cluster: | MCL_coexpression_mm9:2 |
Association with transcript: | 0bp_to_ENSMUST00000030036, NM_019967, uc008thw.1, uc008thx.1_5end |
EntrezGene: | 56710 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 1.89e-13 | 23 |
neuroblast (sensu Vertebrata) | 1.89e-13 | 23 |
neuron | 2.50e-12 | 33 |
neuronal stem cell | 2.50e-12 | 33 |
neuroblast | 2.50e-12 | 33 |
electrically signaling cell | 2.50e-12 | 33 |
ectodermal cell | 9.59e-10 | 44 |
neurectodermal cell | 9.59e-10 | 44 |
neural cell | 1.50e-09 | 43 |
electrically responsive cell | 2.85e-09 | 39 |
electrically active cell | 2.85e-09 | 39 |