FFCP PHASE1:Hg19::chr9:135457972..135457978,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=56751 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=953 | |||
|TSSclassifier=strong | |||
|UniProt=Q5T6V2,Q9BZE3 | |||
|association_with_transcript=-14bp_to_NM_020064,uc004cbp.1_5end | |||
|coexpression_cluster_id=C275 | |||
|description=CAGE_peak_8_at_BARHL1_5end | |||
|id=chr9:135457972..135457978,+ | |||
|ontology_enrichment_celltype=CL:0002603!5.91e-20!3;CL:0000128!4.21e-09!7;CL:0000126!4.21e-09!7;CL:0000127!4.21e-09!7;CL:0002453!4.21e-09!7;CL:0000242!1.50e-08!2;CL:0000095!2.27e-07!17;CL:0000123!2.27e-07!17 | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0006215;1.52e-87;3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004733!1.40e-94!12;UBERON:0002028!1.40e-94!12;UBERON:0007277!1.40e-94!12;UBERON:0004732!2.88e-87!13;UBERON:0002680!7.47e-77!9;UBERON:0001895!7.47e-77!9;UBERON:0010092!7.47e-77!9;UBERON:0003076!1.45e-75!15;UBERON:0003057!1.45e-75!15;UBERON:0002298!4.41e-44!8;UBERON:0000988!3.94e-43!3;UBERON:0002037!1.74e-38!6;UBERON:0006215!1.74e-38!6;UBERON:0002148!5.25e-29!2;UBERON:0009662!5.25e-29!2;UBERON:0001049!1.59e-23!57;UBERON:0005068!1.59e-23!57;UBERON:0006241!1.59e-23!57;UBERON:0007135!1.59e-23!57;UBERON:0001017!4.33e-23!82;UBERON:0000955!4.68e-23!69;UBERON:0006238!4.68e-23!69;UBERON:0002616!1.04e-22!59;UBERON:0005743!5.47e-22!86;UBERON:0000073!7.68e-20!94;UBERON:0001016!7.68e-20!94;UBERON:0001896!9.53e-20!3;UBERON:0005290!9.53e-20!3;UBERON:0010096!9.53e-20!3;UBERON:0006331!1.05e-19!3;UBERON:0003075!1.19e-18!86;UBERON:0007284!1.19e-18!86;UBERON:0002346!8.76e-18!90;UBERON:0004121!1.12e-12!169;UBERON:0000033!1.29e-12!123;UBERON:0000924!2.33e-12!173;UBERON:0006601!2.33e-12!173;UBERON:0000153!5.55e-12!129;UBERON:0007811!5.55e-12!129;UBERON:0000063!4.96e-11!97;UBERON:0007023!4.12e-09!115;UBERON:0002360!2.31e-08!2;UBERON:0000094!2.31e-08!2;UBERON:0007645!2.31e-08!2;UBERON:0002308!3.45e-07!9;UBERON:0000125!3.45e-07!9 | |||
|ontology_enrichment_uberon_v019=UBERON:0002680;3.75e-66;9!UBERON:0001895;3.75e-66;9!UBERON:0004733;5.59e-50;12!UBERON:0002028;5.59e-50;12!UBERON:0004732;3.04e-46;13!UBERON:0002037;1.52e-44;6!UBERON:0000988;2.62e-23;3!UBERON:0002298;2.19e-12;6!UBERON:0000073;4.95e-09;53!UBERON:0002616;4.95e-09;53!UBERON:0001016;7.38e-07;83!UBERON:0000955;7.40e-07;68 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002680,3.75e-66,9;UBERON:0001895,3.75e-66,9;UBERON:0010092,3.75e-66,9;UBERON:0004733,5.59e-50,12;UBERON:0002028,5.59e-50,12;UBERON:0007277,5.59e-50,12;UBERON:0004732,3.04e-46,13;UBERON:0002037,1.52e-44,6;UBERON:0006215,1.52e-44,6;UBERON:0003076,2.90e-40,15;UBERON:0003057,2.90e-40,15;UBERON:0000988,2.62e-23,3;UBERON:0002298,2.19e-12,6;UBERON:0000073,4.68e-12,53;UBERON:0002616,4.68e-12,53;UBERON:0001049,1.77e-11,56;UBERON:0005068,1.77e-11,56;UBERON:0006241,1.77e-11,56;UBERON:0007135,1.77e-11,56;UBERON:0000955,1.53e-09,68;UBERON:0006238,1.53e-09,68;UBERON:0001017,3.31e-08,81;UBERON:0003075,3.31e-08,82;UBERON:0007284,3.31e-08,82;UBERON:0002346,7.10e-08,86;UBERON:0001016,1.68e-07,89 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.246242116153576,0,0.313454721478088,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0927680981618513,0,0,0,0,0,0,0,0,0,0,0,0,0,1.3269511191747,1.18219047581419,0.219385397153973,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.30607276163049,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.258565912723101,0.13223260174269,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.110929051536852,0.310482014706917,0,0,0,0,0,0,0.579684114443301,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.85472878502693,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.198950775161368,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p8@BARHL1 | |||
}} |
Revision as of 03:51, 23 January 2014
Short description: | p8@BARHL1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_8_at_BARHL1_5end |
Coexpression cluster: | C275_pons_medulla_cerebellum_locus_thalamus_diencephalon_spinal |
Association with transcript: | -14bp_to_NM_020064, uc004cbp.1_5end |
EntrezGene: | BARHL1 |
HGNC: | 953 |
UniProt: | Q5T6V2Q9BZE3 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
regional part of metencephalon | 3.75e-66 | 9 |
metencephalon | 3.75e-66 | 9 |
future metencephalon | 3.75e-66 | 9 |
segmental subdivision of hindbrain | 5.59e-50 | 12 |
hindbrain | 5.59e-50 | 12 |
presumptive hindbrain | 5.59e-50 | 12 |
segmental subdivision of nervous system | 3.04e-46 | 13 |
cerebellum | 1.52e-44 | 6 |
rhombic lip | 1.52e-44 | 6 |
posterior neural tube | 2.90e-40 | 15 |
chordal neural plate | 2.90e-40 | 15 |
pons | 2.62e-23 | 3 |
brainstem | 2.19e-12 | 6 |
regional part of nervous system | 4.68e-12 | 53 |
regional part of brain | 4.68e-12 | 53 |
neural tube | 1.77e-11 | 56 |
neural rod | 1.77e-11 | 56 |
future spinal cord | 1.77e-11 | 56 |
neural keel | 1.77e-11 | 56 |
brain | 1.53e-09 | 68 |
future brain | 1.53e-09 | 68 |
central nervous system | 3.31e-08 | 81 |
neural plate | 3.31e-08 | 82 |
presumptive neural plate | 3.31e-08 | 82 |
neurectoderm | 7.10e-08 | 86 |
nervous system | 1.68e-07 | 89 |