FFCP PHASE1:Mm9::chr6:41484314..41484337,+: Difference between revisions
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{{FFCP|EntrezGene=|HGNC=|MCL_coexpression_id=4|UniProt=|association_with_transcript=0bp_to_ENSMUST00000103286,uc009bpg.1,uc009bph.1_5end|description=CAGE_peak_1_at_ENSMUST00000103286_5end,CAGE_peak_1_at_uc009bpg.1_5end,CAGE_peak_1_at_uc009bph.1_5end|id=chr6:41484314..41484337,+|ontology_enrichment_celltype=CL:0000791!1.38e-12!9;CL:0000789!1.38e-12!9;CL:0002420!1.38e-12!9;CL:0002419!1.38e-12!9;CL:0000790!1.38e-12!9;CL:0000624!2.04e-11!8;CL:0000084!7.57e-10!11;CL:0000827!7.57e-10!11;CL:0000893!4.67e-09!6;CL:0002489!4.67e-09!6;CL:0000898!4.67e-09!6;CL:0000809!4.67e-09!6;CL:0000810!4.67e-09!6;CL:0000895!4.67e-09!6;CL:0000808!4.67e-09!6;CL:0000894!4.67e-09!6;CL:0000806!4.67e-09!6;CL:0000807!4.67e-09!6;CL:0000805!4.67e-09!6;CL:0002425!4.67e-09!6;CL:0002436!4.67e-09!6;CL:0002427!4.67e-09!6;CL:0002428!4.67e-09!6;CL:0002429!4.67e-09!6;CL:0002433!4.67e-09!6;CL:0002431!4.67e-09!6;CL:0002432!4.67e-09!6;CL:0000838!7.96e-09!12;CL:0000542!5.78e-08!13;CL:0000051!5.78e-08!13;CL:0002031!9.28e-08!25|ontology_enrichment_celltype_v019_2=CL:0000791,4.45e-28,9;CL:0000789,4.45e-28,9;CL:0002420,4.45e-28,9;CL:0002419,4.45e-28,9;CL:0000790,4.45e-28,9;CL:0000624,2.98e-25,8;CL:0000084,1.02e-22,11;CL:0000827,1.02e-22,11;CL:0000838,1.04e-20,12;CL:0000893,1.43e-19,6;CL:0002489,1.43e-19,6;CL:0000898,1.43e-19,6;CL:0000809,1.43e-19,6;CL:0000810,1.43e-19,6;CL:0000895,1.43e-19,6;CL:0000808,1.43e-19,6;CL:0000894,1.43e-19,6;CL:0000806,1.43e-19,6;CL:0000807,1.43e-19,6;CL:0000805,1.43e-19,6;CL:0002425,1.43e-19,6;CL:0002436,1.43e-19,6;CL:0002427,1.43e-19,6;CL:0002428,1.43e-19,6;CL:0002429,1.43e-19,6;CL:0002433,1.43e-19,6;CL:0002431,1.43e-19,6;CL:0002432,1.43e-19,6;CL:0000542,5.25e-19,13;CL:0000051,5.25e-19,13;CL:0000738,3.38e-14,17;CL:0002087,3.38e-14,17;CL:0002031,3.41e-09,25;CL:0000988,7.17e-07,32;CL:0002032,7.17e-07,32;CL:0000037,7.17e-07,32;CL:0000837,7.17e-07,32|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002370!1.73e-23!23;UBERON:0000974!1.73e-23!23;UBERON:0004807!1.73e-23!23;UBERON:0005058!1.73e-23!23;UBERON:0003351!1.73e-23!23;UBERON:0009113!1.73e-23!23;UBERON:0003295!1.73e-23!23;UBERON:0009722!1.73e-23!23;UBERON:0005562!1.73e-23!23;UBERON:0007690!1.73e-23!23;UBERON:0004177!2.82e-22!29;UBERON:0006562!3.26e-22!24;UBERON:0003408!3.26e-22!24;UBERON:0001557!3.26e-22!24;UBERON:0001042!3.26e-22!24;UBERON:0008814!3.26e-22!24;UBERON:0009145!3.26e-22!24;UBERON:0000065!2.69e-21!41;UBERON:0001004!1.44e-20!42;UBERON:0002193!2.20e-19!48;UBERON:0000072!5.81e-19!27;UBERON:0002390!3.21e-18!45;UBERON:0003061!3.21e-18!45;UBERON:0000063!4.48e-13!35;UBERON:0002405!2.95e-12!70;UBERON:0005057!1.64e-11!51;UBERON:0005911!7.41e-11!69;UBERON:0003081!4.33e-09!88;UBERON:0001041!1.76e-08!92;UBERON:0003929!1.16e-07!55;UBERON:0000077!1.44e-07!97|ontology_enrichment_uberon_v019_2=UBERON:0002370,1.27e-56,23;UBERON:0000974,1.27e-56,23;UBERON:0004807,1.27e-56,23;UBERON:0005058,1.27e-56,23;UBERON:0003351,1.27e-56,23;UBERON:0009113,1.27e-56,23;UBERON:0003295,1.27e-56,23;UBERON:0009722,1.27e-56,23;UBERON:0005562,1.27e-56,23;UBERON:0007690,1.27e-56,23;UBERON:0006562,4.16e-54,24;UBERON:0003408,4.16e-54,24;UBERON:0001557,4.16e-54,24;UBERON:0001042,4.16e-54,24;UBERON:0008814,4.16e-54,24;UBERON:0009145,4.16e-54,24;UBERON:0000072,1.12e-47,27;UBERON:0004177,3.98e-44,29;UBERON:0005057,3.98e-44,29;UBERON:0000077,6.60e-36,35;UBERON:0007811,8.39e-35,36;UBERON:0000065,3.34e-33,41;UBERON:0001004,2.56e-32,42;UBERON:0000153,1.65e-28,43;UBERON:0002390,4.55e-27,45;UBERON:0003061,4.55e-27,45;UBERON:0002193,3.92e-25,48;UBERON:0002405,3.92e-25,48;UBERON:0003929,1.95e-21,55;UBERON:0002368,2.53e-19,60;UBERON:0005911,4.29e-18,69;UBERON:0002530,1.56e-17,65;UBERON:0000490,3.31e-17,66;UBERON:0000949,1.92e-15,72;UBERON:0001041,4.83e-15,80;UBERON:0003081,4.29e-12,87;UBERON:0004921,2.55e-09,114;UBERON:0001007,4.35e-09,116;UBERON:0001555,4.35e-09,116;UBERON:0007026,4.35e-09,116;UBERON:0004119,7.30e-09,118;UBERON:0000925,7.30e-09,118;UBERON:0006595,7.30e-09,118;UBERON:0000926,1.15e-07,120;UBERON:0004120,1.15e-07,120;UBERON:0006603,1.15e-07,120;UBERON:0001048,2.63e-07,134|phase1_expression=0,0,0,0,0,0,0,6.71441281896197,43.2221377005617,51.0260667381946,6.67750076079469,11.0883301003518,4.45121897821135,5.76974655965383,0.333109761815663,0.202475267389826,0,0.315462165358238,0.274228867211478,0.42438965179803,1.36069264241712,0,0,0,0.22940928106717,0,0,0,0.380046838912748,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.17608642603403,4.36921938885203,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.151452386666368,0,0,0,0,0,0,0,1.68533304158102,0,0,0,0,0,0,0,0,0,0,0.68510327831436,0.517875767294343,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.11981512450592,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.116765342367169,0,0.164167464079095,0.162137619091711,0.584799949701329,0.219550115291051,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.216138049874694,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.25462585178142,0,0,0,0,0.372140947668503,0,0,0,0,0.184753190166605,0,0,0,0,1.50755631697634,0,0.195133647857799,0,0.664394068946325,0.318909537314974,0.491589944147214,0.172684981865896,0.289298117163023,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.258428293168221,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.180938774784468,0,0,0,0,0,0,0,0.188368457004691,0.136694227721025,0.228778173206523,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.168956125490778,0,0,0,0,0,31.917123183446,4.25722952109345,10.0656738021531,24.8148771887588,35.4472857421613,45.8953929544722,46.0348571661481,53.7589878915461,55.7334803713775,58.6030343176949,54.6477923441676,47.4619879202594,46.3741076706388,53.1789904926139,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.412070114477788,0.320919209591815,0,0,0,0.0936415074698824,0.0640251524048693,0.287177344778066,0,0,0.192909220463705,0,0.147198920134397,0,0.177475806159338,0.238436189947321,0,0.376437521661322,0.25384382367503,0.182927972872773,0,0.135804113845862,0,0,0.29551344712669,0.409231043169689,0.154936841185966,0,0,0,1.07435527024149,0,0,0|short_description=p1@ENSMUST00000103286,p1@uc009bpg.1,p1@uc009bph.1}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene= | |||
|HGNC= | |||
|MCL_coexpression_id=4 | |||
|TSSclassifier=NA | |||
|UniProt= | |||
|association_with_transcript=0bp_to_ENSMUST00000103286,uc009bpg.1,uc009bph.1_5end | |||
|cluster_id=chr6:41484314..41484337,+ | |||
|description=CAGE_peak_1_at_ENSMUST00000103286_5end,CAGE_peak_1_at_uc009bpg.1_5end,CAGE_peak_1_at_uc009bph.1_5end | |||
|id=chr6:41484314..41484337,+ | |||
|ontology_enrichment_celltype=CL:0000791!1.38e-12!9;CL:0000789!1.38e-12!9;CL:0002420!1.38e-12!9;CL:0002419!1.38e-12!9;CL:0000790!1.38e-12!9;CL:0000624!2.04e-11!8;CL:0000084!7.57e-10!11;CL:0000827!7.57e-10!11;CL:0000893!4.67e-09!6;CL:0002489!4.67e-09!6;CL:0000898!4.67e-09!6;CL:0000809!4.67e-09!6;CL:0000810!4.67e-09!6;CL:0000895!4.67e-09!6;CL:0000808!4.67e-09!6;CL:0000894!4.67e-09!6;CL:0000806!4.67e-09!6;CL:0000807!4.67e-09!6;CL:0000805!4.67e-09!6;CL:0002425!4.67e-09!6;CL:0002436!4.67e-09!6;CL:0002427!4.67e-09!6;CL:0002428!4.67e-09!6;CL:0002429!4.67e-09!6;CL:0002433!4.67e-09!6;CL:0002431!4.67e-09!6;CL:0002432!4.67e-09!6;CL:0000838!7.96e-09!12;CL:0000542!5.78e-08!13;CL:0000051!5.78e-08!13;CL:0002031!9.28e-08!25 | |||
|ontology_enrichment_celltype_v019_2=CL:0000791,4.45e-28,9;CL:0000789,4.45e-28,9;CL:0002420,4.45e-28,9;CL:0002419,4.45e-28,9;CL:0000790,4.45e-28,9;CL:0000624,2.98e-25,8;CL:0000084,1.02e-22,11;CL:0000827,1.02e-22,11;CL:0000838,1.04e-20,12;CL:0000893,1.43e-19,6;CL:0002489,1.43e-19,6;CL:0000898,1.43e-19,6;CL:0000809,1.43e-19,6;CL:0000810,1.43e-19,6;CL:0000895,1.43e-19,6;CL:0000808,1.43e-19,6;CL:0000894,1.43e-19,6;CL:0000806,1.43e-19,6;CL:0000807,1.43e-19,6;CL:0000805,1.43e-19,6;CL:0002425,1.43e-19,6;CL:0002436,1.43e-19,6;CL:0002427,1.43e-19,6;CL:0002428,1.43e-19,6;CL:0002429,1.43e-19,6;CL:0002433,1.43e-19,6;CL:0002431,1.43e-19,6;CL:0002432,1.43e-19,6;CL:0000542,5.25e-19,13;CL:0000051,5.25e-19,13;CL:0000738,3.38e-14,17;CL:0002087,3.38e-14,17;CL:0002031,3.41e-09,25;CL:0000988,7.17e-07,32;CL:0002032,7.17e-07,32;CL:0000037,7.17e-07,32;CL:0000837,7.17e-07,32 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002370!1.73e-23!23;UBERON:0000974!1.73e-23!23;UBERON:0004807!1.73e-23!23;UBERON:0005058!1.73e-23!23;UBERON:0003351!1.73e-23!23;UBERON:0009113!1.73e-23!23;UBERON:0003295!1.73e-23!23;UBERON:0009722!1.73e-23!23;UBERON:0005562!1.73e-23!23;UBERON:0007690!1.73e-23!23;UBERON:0004177!2.82e-22!29;UBERON:0006562!3.26e-22!24;UBERON:0003408!3.26e-22!24;UBERON:0001557!3.26e-22!24;UBERON:0001042!3.26e-22!24;UBERON:0008814!3.26e-22!24;UBERON:0009145!3.26e-22!24;UBERON:0000065!2.69e-21!41;UBERON:0001004!1.44e-20!42;UBERON:0002193!2.20e-19!48;UBERON:0000072!5.81e-19!27;UBERON:0002390!3.21e-18!45;UBERON:0003061!3.21e-18!45;UBERON:0000063!4.48e-13!35;UBERON:0002405!2.95e-12!70;UBERON:0005057!1.64e-11!51;UBERON:0005911!7.41e-11!69;UBERON:0003081!4.33e-09!88;UBERON:0001041!1.76e-08!92;UBERON:0003929!1.16e-07!55;UBERON:0000077!1.44e-07!97 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002370,1.27e-56,23;UBERON:0000974,1.27e-56,23;UBERON:0004807,1.27e-56,23;UBERON:0005058,1.27e-56,23;UBERON:0003351,1.27e-56,23;UBERON:0009113,1.27e-56,23;UBERON:0003295,1.27e-56,23;UBERON:0009722,1.27e-56,23;UBERON:0005562,1.27e-56,23;UBERON:0007690,1.27e-56,23;UBERON:0006562,4.16e-54,24;UBERON:0003408,4.16e-54,24;UBERON:0001557,4.16e-54,24;UBERON:0001042,4.16e-54,24;UBERON:0008814,4.16e-54,24;UBERON:0009145,4.16e-54,24;UBERON:0000072,1.12e-47,27;UBERON:0004177,3.98e-44,29;UBERON:0005057,3.98e-44,29;UBERON:0000077,6.60e-36,35;UBERON:0007811,8.39e-35,36;UBERON:0000065,3.34e-33,41;UBERON:0001004,2.56e-32,42;UBERON:0000153,1.65e-28,43;UBERON:0002390,4.55e-27,45;UBERON:0003061,4.55e-27,45;UBERON:0002193,3.92e-25,48;UBERON:0002405,3.92e-25,48;UBERON:0003929,1.95e-21,55;UBERON:0002368,2.53e-19,60;UBERON:0005911,4.29e-18,69;UBERON:0002530,1.56e-17,65;UBERON:0000490,3.31e-17,66;UBERON:0000949,1.92e-15,72;UBERON:0001041,4.83e-15,80;UBERON:0003081,4.29e-12,87;UBERON:0004921,2.55e-09,114;UBERON:0001007,4.35e-09,116;UBERON:0001555,4.35e-09,116;UBERON:0007026,4.35e-09,116;UBERON:0004119,7.30e-09,118;UBERON:0000925,7.30e-09,118;UBERON:0006595,7.30e-09,118;UBERON:0000926,1.15e-07,120;UBERON:0004120,1.15e-07,120;UBERON:0006603,1.15e-07,120;UBERON:0001048,2.63e-07,134 | |||
|phase1_expression=0,0,0,0,0,0,0,6.71441281896197,43.2221377005617,51.0260667381946,6.67750076079469,11.0883301003518,4.45121897821135,5.76974655965383,0.333109761815663,0.202475267389826,0,0.315462165358238,0.274228867211478,0.42438965179803,1.36069264241712,0,0,0,0.22940928106717,0,0,0,0.380046838912748,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.17608642603403,4.36921938885203,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.151452386666368,0,0,0,0,0,0,0,1.68533304158102,0,0,0,0,0,0,0,0,0,0,0.68510327831436,0.517875767294343,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.11981512450592,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.116765342367169,0,0.164167464079095,0.162137619091711,0.584799949701329,0.219550115291051,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.216138049874694,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.25462585178142,0,0,0,0,0.372140947668503,0,0,0,0,0.184753190166605,0,0,0,0,1.50755631697634,0,0.195133647857799,0,0.664394068946325,0.318909537314974,0.491589944147214,0.172684981865896,0.289298117163023,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.258428293168221,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.180938774784468,0,0,0,0,0,0,0,0.188368457004691,0.136694227721025,0.228778173206523,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.168956125490778,0,0,0,0,0,31.917123183446,4.25722952109345,10.0656738021531,24.8148771887588,35.4472857421613,45.8953929544722,46.0348571661481,53.7589878915461,55.7334803713775,58.6030343176949,54.6477923441676,47.4619879202594,46.3741076706388,53.1789904926139,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.412070114477788,0.320919209591815,0,0,0,0.0936415074698824,0.0640251524048693,0.287177344778066,0,0,0.192909220463705,0,0.147198920134397,0,0.177475806159338,0.238436189947321,0,0.376437521661322,0.25384382367503,0.182927972872773,0,0.135804113845862,0,0,0.29551344712669,0.409231043169689,0.154936841185966,0,0,0,1.07435527024149,0,0,0 | |||
|short_description=p1@ENSMUST00000103286,p1@uc009bpg.1,p1@uc009bph.1 | |||
}} |
Latest revision as of 17:42, 5 August 2015
Short description: | p1@ENSMUST00000103286, p1@uc009bpg.1, p1@uc009bph.1 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_ENSMUST00000103286_5end, CAGE_peak_1_at_uc009bpg.1_5end, CAGE_peak_1_at_uc009bph.1_5end |
Coexpression cluster: | MCL_coexpression_mm9:4 |
Association with transcript: | 0bp_to_ENSMUST00000103286, uc009bpg.1, uc009bph.1_5end |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data