FFCP PHASE1:Mm9::chr7:111031610..111031645,-: Difference between revisions
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{{FFCP|EntrezGene=|HGNC=|MCL_coexpression_id=2036|UniProt=|association_with_transcript=-92bp_to_ENSMUST00000120890_5end|description=CAGE_peak_1_at_ENSMUST00000120890_5end|id=chr7:111031610..111031645,-|ontology_enrichment_celltype=CL:0000221!1.92e-26!44;CL:0000133!1.92e-26!44;CL:0002319!2.62e-26!43;CL:0000055!1.56e-24!50;CL:0000540!6.58e-20!33;CL:0000047!6.58e-20!33;CL:0000031!6.58e-20!33;CL:0000404!6.58e-20!33;CL:0000393!2.88e-19!39;CL:0000211!2.88e-19!39;CL:0002321!2.49e-16!70;CL:0000220!2.49e-16!70;CL:0000117!3.01e-14!23;CL:0000337!3.01e-14!23;CL:0000548!6.66e-14!115;CL:0000004!6.66e-14!115;CL:0000255!6.66e-14!115;CL:0002371!1.45e-12!118;CL:0000723!5.34e-12!91;CL:0000048!5.34e-12!91;CL:0000144!2.51e-11!121;CL:0000012!2.51e-11!121;CL:0000034!9.65e-11!97;CL:0000333!3.78e-07!10;CL:0000095!3.78e-07!10;CL:0000243!3.78e-07!10;CL:0000123!3.78e-07!10;CL:0000125!3.78e-07!10;CL:0000030!3.78e-07!10;CL:0000339!3.78e-07!10|ontology_enrichment_celltype_v019_2=CL:0002319,1.37e-58,43;CL:0000221,5.34e-57,44;CL:0000133,5.34e-57,44;CL:0000540,3.21e-43,33;CL:0000047,3.21e-43,33;CL:0000031,3.21e-43,33;CL:0000404,3.21e-43,33;CL:0000393,2.67e-42,39;CL:0000211,2.67e-42,39;CL:0002321,1.22e-41,70;CL:0000117,6.32e-32,23;CL:0000337,6.32e-32,23;CL:0000723,1.29e-27,91;CL:0000048,1.29e-27,91;CL:0000034,1.48e-26,97;CL:0000333,6.35e-15,10;CL:0000095,6.35e-15,10;CL:0000243,6.35e-15,10;CL:0000123,6.35e-15,10;CL:0000125,6.35e-15,10;CL:0000030,6.35e-15,10;CL:0000339,6.35e-15,10;CL:0000107,2.32e-13,9;CL:0002453,6.98e-12,8;CL:0002609,1.56e-09,6;CL:0000128,4.81e-09,6;CL:0000126,4.81e-09,6;CL:0000127,4.81e-09,6|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000073!2.24e-12!75;UBERON:0001016!2.24e-12!75;UBERON:0001017!2.61e-11!73;UBERON:0005743!2.61e-11!73;UBERON:0004121!6.71e-08!102;UBERON:0000924!6.71e-08!102;UBERON:0006601!6.71e-08!102;UBERON:0000010!8.94e-08!11|ontology_enrichment_uberon_v019_2=UBERON:0001016,9.35e-29,75;UBERON:0001017,3.84e-26,73;UBERON:0004121,2.42e-20,95;UBERON:0000924,2.42e-20,95;UBERON:0006601,2.42e-20,95;UBERON:0000010,2.05e-16,11;UBERON:0002410,2.32e-13,9;UBERON:0002020,1.11e-12,34;UBERON:0000073,7.99e-11,54;UBERON:0002346,1.23e-08,64;UBERON:0003075,1.23e-08,64;UBERON:0007284,1.23e-08,64;UBERON:0001049,1.59e-08,52;UBERON:0005068,1.59e-08,52;UBERON:0006241,1.59e-08,52;UBERON:0007135,1.59e-08,52;UBERON:0001948,3.62e-08,5;UBERON:0002315,3.62e-08,5;UBERON:0003528,8.14e-08,29;UBERON:0002791,8.14e-08,29;UBERON:0001893,8.14e-08,29;UBERON:0010371,7.77e-07,73;UBERON:0011216,7.83e-07,194;UBERON:0002420,8.42e-07,8;UBERON:0007245,8.42e-07,8;UBERON:0010009,8.42e-07,8;UBERON:0010011,8.42e-07,8;UBERON:0000454,8.42e-07,8|phase1_expression=0.640595388419176,0,0,0,0,0,0.934450562382103,0.387369970324729,0,0.468129052643987,0.513653904676515,0.717949430958028,0.171200729931206,0.174840804837995,0.333109761815663,0.607425802169478,0,0.157731082679119,0.685572168028694,0,0,0.198581902401771,0.261199789138935,0.47997726838022,0.68822784320151,0,0,0.215471232685889,0.570070258369122,0.252030129759931,0.665191531965914,0,0,0,0,0.166234645358492,0,0,0,0,0,0,0,0.251793635951155,0.101376931219515,0,4.69434806608824,6.75877984779384,6.15121311656521,6.02732687130279,4.19959264876088,4.31257693094915,0.335565212115473,0,0,3.8588915405392,3.43840127926508,2.06268836910977,6.47412674750713,7.93486468908049,8.87363964908651,2.71075625655306,11.5608323494448,7.19919773825119,15.8218618010716,16.3410426437603,8.08920298399693,5.76327457982332,5.18448061542388,6.75029691658453,5.04779907243317,7.14127461009509,7.28866185140325,5.87955836231779,5.65488279007595,11.0306254393203,1.10115880999389,2.17068474744819,3.5329502648936,8.83638127792299,6.31264740856627,7.8137005583514,5.862842979029,3.93933827022176,2.75036845998258,6.48182888042069,2.42031857358475,6.15118171223492,6.36100023998746,13.376166138901,0,0,19.7191686775248,21.0484244738749,0,0,0.140444420131752,0.340860645156116,1.03914401841148,0.35333957451034,0.422530259330042,0,0,0,0.216491041011214,0.506719730950197,0.505524445014783,0.34255163915718,0,0.148442139064825,0.173485326766136,0.304465478312141,0.461230994512117,0.150722640552623,0,0.251333182659351,0.247194967734374,0,0,0.485300549842228,0.883366073841574,0.484875253135222,3.72783522436244,0.292780797011547,0.209446706813455,0.255457055208591,0,0.599902730993408,0,0,0,0,0.173824320192276,0.511430914660661,0.41557608911912,0,0.101839363850316,0.373220911830279,0,0.210441855886474,0,0.229902104433473,0.180062129805349,0,0.136072998302656,0,0.0937017245597288,0,0,0,0,0.219195732427575,0,0,0.205782136407943,0,0,0,0.568326998791185,0.207125772535502,0,0,0,0.196764231747404,0,0,0,0.233530684734339,0.16455984991348,0.164167464079095,0.0810688095458557,0.146199987425332,0.658650345873152,0.402619256281115,0.420579897128254,0.102904612379284,0.330418782983798,0.264450566663544,0.213288250535234,0,0.128867461322093,0.403367049246685,0.22237804384487,0,0,0.329397909448022,0.754005626400808,0.198956472041151,0.58489226135736,0,0,0,0.189667900953082,0.342745537829186,0,0.203651327845314,0,0.0701358198903186,0.126473074248515,0,0.156998727841375,0.370191491765402,0.296452627087149,0.333690211432188,0,0.449724224769707,0.202860121388503,0.482354319504834,0.25462585178142,0.287696137450811,0,0,1.43768206527355,0.372140947668503,0.624075346229121,0,0.717589654087649,0.482443521363367,0.184753190166605,0.189491411770485,0.162964976442026,0.339490171550376,0.704070744865506,0.335012514883631,0.714130922658041,0,0.157635144106191,0.221464689648775,0.318909537314974,0.327726629431476,0,0.144649058581512,0,2.17562273527484,0,0,0.481651769963376,0,0.655739781506702,0.252470927204373,5.04813151066011,7.80877488593277,7.75524231838076,4.30143836314594,7.79795359288379,5.37845408498782,4.04810701674894,4.67609372658099,7.11518000303742,0.321321316421807,0.141940085208269,0.178065603667255,0,0.164970122972535,1.32745138339963,0,0.302323556964751,0.188605079755898,2.95301892880773,0.922305443831782,0,0,0.356497378384721,0,0,0,0.340439605753788,0.36012218806262,0.129358683782755,0,0.177340233642274,0,0.164549020602121,0,0.23467170806371,0,0,0,0,0.180938774784468,0.358117032009409,0,0,0.18542530201051,0,0,0.185194527369712,0,0.27338845544205,0,0,0,0,0,0,0.406638934253697,0.108005340821801,0,0,0.134864346384821,0.0826534557253359,0,0,0.621339313086926,0.56369293868419,0.149516546043979,0,0,0.129159823477731,0,0.234714477291508,0,0,0.241584120826006,0,0.316011120628178,0,0.410843828659309,0,0.179026695667481,0.198681354781265,0,0,0.100966449948148,0.228620419965,0.100826185136841,0.0974578807397524,0.0962118416403295,0.350630706544707,0,0,3.94740969081693,0.335769232728157,0,0.375364950902364,0.183151624267265,0.214368379079066,0,0,0,0,0,0,0,0.675022500231806,0,0.453142408984205,0,0.103787347584177,0,0,0.243106717068294,0.628839487883947,0.183843508450014,0,0.206035057238894,0.320919209591815,0,0.760437899670719,0,0.0936415074698824,0.128050304809739,0.114870937911227,0.476293691283074,0,0.192909220463705,0,0,0.342869252385415,0,0.238436189947321,0.290692833264657,0.282328141245992,0,0,0,0,0,0.237270036248348,0,0.409231043169689,0.464810523557898,0.192906610981141,0,0.467863216890817,0.214871054048298,0.382576664137687,0.661774257358546,0.231867835620421|short_description=p1@ENSMUST00000120890}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene= | |||
|HGNC= | |||
|MCL_coexpression_id=2036 | |||
|TSSclassifier=NA | |||
|UniProt= | |||
|association_with_transcript=-92bp_to_ENSMUST00000120890_5end | |||
|cluster_id=chr7:111031610..111031645,- | |||
|description=CAGE_peak_1_at_ENSMUST00000120890_5end | |||
|id=chr7:111031610..111031645,- | |||
|ontology_enrichment_celltype=CL:0000221!1.92e-26!44;CL:0000133!1.92e-26!44;CL:0002319!2.62e-26!43;CL:0000055!1.56e-24!50;CL:0000540!6.58e-20!33;CL:0000047!6.58e-20!33;CL:0000031!6.58e-20!33;CL:0000404!6.58e-20!33;CL:0000393!2.88e-19!39;CL:0000211!2.88e-19!39;CL:0002321!2.49e-16!70;CL:0000220!2.49e-16!70;CL:0000117!3.01e-14!23;CL:0000337!3.01e-14!23;CL:0000548!6.66e-14!115;CL:0000004!6.66e-14!115;CL:0000255!6.66e-14!115;CL:0002371!1.45e-12!118;CL:0000723!5.34e-12!91;CL:0000048!5.34e-12!91;CL:0000144!2.51e-11!121;CL:0000012!2.51e-11!121;CL:0000034!9.65e-11!97;CL:0000333!3.78e-07!10;CL:0000095!3.78e-07!10;CL:0000243!3.78e-07!10;CL:0000123!3.78e-07!10;CL:0000125!3.78e-07!10;CL:0000030!3.78e-07!10;CL:0000339!3.78e-07!10 | |||
|ontology_enrichment_celltype_v019_2=CL:0002319,1.37e-58,43;CL:0000221,5.34e-57,44;CL:0000133,5.34e-57,44;CL:0000540,3.21e-43,33;CL:0000047,3.21e-43,33;CL:0000031,3.21e-43,33;CL:0000404,3.21e-43,33;CL:0000393,2.67e-42,39;CL:0000211,2.67e-42,39;CL:0002321,1.22e-41,70;CL:0000117,6.32e-32,23;CL:0000337,6.32e-32,23;CL:0000723,1.29e-27,91;CL:0000048,1.29e-27,91;CL:0000034,1.48e-26,97;CL:0000333,6.35e-15,10;CL:0000095,6.35e-15,10;CL:0000243,6.35e-15,10;CL:0000123,6.35e-15,10;CL:0000125,6.35e-15,10;CL:0000030,6.35e-15,10;CL:0000339,6.35e-15,10;CL:0000107,2.32e-13,9;CL:0002453,6.98e-12,8;CL:0002609,1.56e-09,6;CL:0000128,4.81e-09,6;CL:0000126,4.81e-09,6;CL:0000127,4.81e-09,6 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000073!2.24e-12!75;UBERON:0001016!2.24e-12!75;UBERON:0001017!2.61e-11!73;UBERON:0005743!2.61e-11!73;UBERON:0004121!6.71e-08!102;UBERON:0000924!6.71e-08!102;UBERON:0006601!6.71e-08!102;UBERON:0000010!8.94e-08!11 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001016,9.35e-29,75;UBERON:0001017,3.84e-26,73;UBERON:0004121,2.42e-20,95;UBERON:0000924,2.42e-20,95;UBERON:0006601,2.42e-20,95;UBERON:0000010,2.05e-16,11;UBERON:0002410,2.32e-13,9;UBERON:0002020,1.11e-12,34;UBERON:0000073,7.99e-11,54;UBERON:0002346,1.23e-08,64;UBERON:0003075,1.23e-08,64;UBERON:0007284,1.23e-08,64;UBERON:0001049,1.59e-08,52;UBERON:0005068,1.59e-08,52;UBERON:0006241,1.59e-08,52;UBERON:0007135,1.59e-08,52;UBERON:0001948,3.62e-08,5;UBERON:0002315,3.62e-08,5;UBERON:0003528,8.14e-08,29;UBERON:0002791,8.14e-08,29;UBERON:0001893,8.14e-08,29;UBERON:0010371,7.77e-07,73;UBERON:0011216,7.83e-07,194;UBERON:0002420,8.42e-07,8;UBERON:0007245,8.42e-07,8;UBERON:0010009,8.42e-07,8;UBERON:0010011,8.42e-07,8;UBERON:0000454,8.42e-07,8 | |||
|phase1_expression=0.640595388419176,0,0,0,0,0,0.934450562382103,0.387369970324729,0,0.468129052643987,0.513653904676515,0.717949430958028,0.171200729931206,0.174840804837995,0.333109761815663,0.607425802169478,0,0.157731082679119,0.685572168028694,0,0,0.198581902401771,0.261199789138935,0.47997726838022,0.68822784320151,0,0,0.215471232685889,0.570070258369122,0.252030129759931,0.665191531965914,0,0,0,0,0.166234645358492,0,0,0,0,0,0,0,0.251793635951155,0.101376931219515,0,4.69434806608824,6.75877984779384,6.15121311656521,6.02732687130279,4.19959264876088,4.31257693094915,0.335565212115473,0,0,3.8588915405392,3.43840127926508,2.06268836910977,6.47412674750713,7.93486468908049,8.87363964908651,2.71075625655306,11.5608323494448,7.19919773825119,15.8218618010716,16.3410426437603,8.08920298399693,5.76327457982332,5.18448061542388,6.75029691658453,5.04779907243317,7.14127461009509,7.28866185140325,5.87955836231779,5.65488279007595,11.0306254393203,1.10115880999389,2.17068474744819,3.5329502648936,8.83638127792299,6.31264740856627,7.8137005583514,5.862842979029,3.93933827022176,2.75036845998258,6.48182888042069,2.42031857358475,6.15118171223492,6.36100023998746,13.376166138901,0,0,19.7191686775248,21.0484244738749,0,0,0.140444420131752,0.340860645156116,1.03914401841148,0.35333957451034,0.422530259330042,0,0,0,0.216491041011214,0.506719730950197,0.505524445014783,0.34255163915718,0,0.148442139064825,0.173485326766136,0.304465478312141,0.461230994512117,0.150722640552623,0,0.251333182659351,0.247194967734374,0,0,0.485300549842228,0.883366073841574,0.484875253135222,3.72783522436244,0.292780797011547,0.209446706813455,0.255457055208591,0,0.599902730993408,0,0,0,0,0.173824320192276,0.511430914660661,0.41557608911912,0,0.101839363850316,0.373220911830279,0,0.210441855886474,0,0.229902104433473,0.180062129805349,0,0.136072998302656,0,0.0937017245597288,0,0,0,0,0.219195732427575,0,0,0.205782136407943,0,0,0,0.568326998791185,0.207125772535502,0,0,0,0.196764231747404,0,0,0,0.233530684734339,0.16455984991348,0.164167464079095,0.0810688095458557,0.146199987425332,0.658650345873152,0.402619256281115,0.420579897128254,0.102904612379284,0.330418782983798,0.264450566663544,0.213288250535234,0,0.128867461322093,0.403367049246685,0.22237804384487,0,0,0.329397909448022,0.754005626400808,0.198956472041151,0.58489226135736,0,0,0,0.189667900953082,0.342745537829186,0,0.203651327845314,0,0.0701358198903186,0.126473074248515,0,0.156998727841375,0.370191491765402,0.296452627087149,0.333690211432188,0,0.449724224769707,0.202860121388503,0.482354319504834,0.25462585178142,0.287696137450811,0,0,1.43768206527355,0.372140947668503,0.624075346229121,0,0.717589654087649,0.482443521363367,0.184753190166605,0.189491411770485,0.162964976442026,0.339490171550376,0.704070744865506,0.335012514883631,0.714130922658041,0,0.157635144106191,0.221464689648775,0.318909537314974,0.327726629431476,0,0.144649058581512,0,2.17562273527484,0,0,0.481651769963376,0,0.655739781506702,0.252470927204373,5.04813151066011,7.80877488593277,7.75524231838076,4.30143836314594,7.79795359288379,5.37845408498782,4.04810701674894,4.67609372658099,7.11518000303742,0.321321316421807,0.141940085208269,0.178065603667255,0,0.164970122972535,1.32745138339963,0,0.302323556964751,0.188605079755898,2.95301892880773,0.922305443831782,0,0,0.356497378384721,0,0,0,0.340439605753788,0.36012218806262,0.129358683782755,0,0.177340233642274,0,0.164549020602121,0,0.23467170806371,0,0,0,0,0.180938774784468,0.358117032009409,0,0,0.18542530201051,0,0,0.185194527369712,0,0.27338845544205,0,0,0,0,0,0,0.406638934253697,0.108005340821801,0,0,0.134864346384821,0.0826534557253359,0,0,0.621339313086926,0.56369293868419,0.149516546043979,0,0,0.129159823477731,0,0.234714477291508,0,0,0.241584120826006,0,0.316011120628178,0,0.410843828659309,0,0.179026695667481,0.198681354781265,0,0,0.100966449948148,0.228620419965,0.100826185136841,0.0974578807397524,0.0962118416403295,0.350630706544707,0,0,3.94740969081693,0.335769232728157,0,0.375364950902364,0.183151624267265,0.214368379079066,0,0,0,0,0,0,0,0.675022500231806,0,0.453142408984205,0,0.103787347584177,0,0,0.243106717068294,0.628839487883947,0.183843508450014,0,0.206035057238894,0.320919209591815,0,0.760437899670719,0,0.0936415074698824,0.128050304809739,0.114870937911227,0.476293691283074,0,0.192909220463705,0,0,0.342869252385415,0,0.238436189947321,0.290692833264657,0.282328141245992,0,0,0,0,0,0.237270036248348,0,0.409231043169689,0.464810523557898,0.192906610981141,0,0.467863216890817,0.214871054048298,0.382576664137687,0.661774257358546,0.231867835620421 | |||
|short_description=p1@ENSMUST00000120890 | |||
}} |
Latest revision as of 23:29, 3 August 2015
Short description: | p1@ENSMUST00000120890 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_ENSMUST00000120890_5end |
Coexpression cluster: | MCL_coexpression_mm9:2036 |
Association with transcript: | -92bp_to_ENSMUST00000120890_5end |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neural cell | 1.37e-58 | 43 |
ectodermal cell | 5.34e-57 | 44 |
neurectodermal cell | 5.34e-57 | 44 |
neuron | 3.21e-43 | 33 |
neuronal stem cell | 3.21e-43 | 33 |
neuroblast | 3.21e-43 | 33 |
electrically signaling cell | 3.21e-43 | 33 |
electrically responsive cell | 2.67e-42 | 39 |
electrically active cell | 2.67e-42 | 39 |
embryonic cell | 1.22e-41 | 70 |
CNS neuron (sensu Vertebrata) | 6.32e-32 | 23 |
neuroblast (sensu Vertebrata) | 6.32e-32 | 23 |
somatic stem cell | 1.29e-27 | 91 |
multi fate stem cell | 1.29e-27 | 91 |
stem cell | 1.48e-26 | 97 |
migratory neural crest cell | 6.35e-15 | 10 |
neuron associated cell | 6.35e-15 | 10 |
glial cell (sensu Vertebrata) | 6.35e-15 | 10 |
neuron associated cell (sensu Vertebrata) | 6.35e-15 | 10 |
glial cell | 6.35e-15 | 10 |
glioblast | 6.35e-15 | 10 |
glioblast (sensu Vertebrata) | 6.35e-15 | 10 |
autonomic neuron | 2.32e-13 | 9 |
oligodendrocyte precursor cell | 6.98e-12 | 8 |
neuron of cerebral cortex | 1.56e-09 | 6 |
oligodendrocyte | 4.81e-09 | 6 |
macroglial cell | 4.81e-09 | 6 |
astrocyte | 4.81e-09 | 6 |
Ontology term | p-value | n |
---|---|---|
nervous system | 9.35e-29 | 75 |
central nervous system | 3.84e-26 | 73 |
ectoderm-derived structure | 2.42e-20 | 95 |
ectoderm | 2.42e-20 | 95 |
presumptive ectoderm | 2.42e-20 | 95 |
peripheral nervous system | 2.05e-16 | 11 |
autonomic nervous system | 2.32e-13 | 9 |
gray matter | 1.11e-12 | 34 |
regional part of nervous system | 7.99e-11 | 54 |
neurectoderm | 1.23e-08 | 64 |
neural plate | 1.23e-08 | 64 |
presumptive neural plate | 1.23e-08 | 64 |
neural tube | 1.59e-08 | 52 |
neural rod | 1.59e-08 | 52 |
future spinal cord | 1.59e-08 | 52 |
neural keel | 1.59e-08 | 52 |
regional part of spinal cord | 3.62e-08 | 5 |
gray matter of spinal cord | 3.62e-08 | 5 |
brain grey matter | 8.14e-08 | 29 |
regional part of telencephalon | 8.14e-08 | 29 |
telencephalon | 8.14e-08 | 29 |
ecto-epithelium | 7.77e-07 | 73 |
organ system subdivision | 7.83e-07 | 194 |
basal ganglion | 8.42e-07 | 8 |
nuclear complex of neuraxis | 8.42e-07 | 8 |
aggregate regional part of brain | 8.42e-07 | 8 |
collection of basal ganglia | 8.42e-07 | 8 |
cerebral subcortex | 8.42e-07 | 8 |