FFCP PHASE1:Mm9::chr10:57206160..57206220,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 7: | Line 7: | ||
|id=chr10:57206160..57206220,+ | |id=chr10:57206160..57206220,+ | ||
|ontology_enrichment_celltype=CL:0000540!1.44e-09!33;CL:0000047!1.44e-09!33;CL:0000031!1.44e-09!33;CL:0000404!1.44e-09!33;CL:0000393!1.90e-08!39;CL:0000211!1.90e-08!39;CL:0000117!9.02e-08!23;CL:0000337!9.02e-08!23 | |ontology_enrichment_celltype=CL:0000540!1.44e-09!33;CL:0000047!1.44e-09!33;CL:0000031!1.44e-09!33;CL:0000404!1.44e-09!33;CL:0000393!1.90e-08!39;CL:0000211!1.90e-08!39;CL:0000117!9.02e-08!23;CL:0000337!9.02e-08!23 | ||
|ontology_enrichment_celltype_v019_2=CL:0000540,1.44e-09,33;CL:0000047,1.44e-09,33;CL:0000031,1.44e-09,33;CL:0000404,1.44e-09,33;CL:0000393,1.90e-08,39;CL:0000211,1.90e-08,39;CL:0000117,9.02e-08,23;CL:0000337,9.02e-08,23 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!4.66e-13!73;UBERON:0005743!4.66e-13!73;UBERON:0000073!5.07e-13!75;UBERON:0001016!5.07e-13!75;UBERON:0000033!9.63e-13!63;UBERON:0000025!1.47e-12!114;UBERON:0002346!4.54e-12!71;UBERON:0003075!4.54e-12!71;UBERON:0007284!4.54e-12!71;UBERON:0004121!6.86e-12!102;UBERON:0000924!6.86e-12!102;UBERON:0006601!6.86e-12!102;UBERON:0003056!1.23e-11!49;UBERON:0004111!3.05e-11!122;UBERON:0001049!6.16e-11!52;UBERON:0005068!6.16e-11!52;UBERON:0006241!6.16e-11!52;UBERON:0007135!6.16e-11!52;UBERON:0000153!7.06e-11!94;UBERON:0000955!3.13e-10!50;UBERON:0006238!3.13e-10!50;UBERON:0007811!3.88e-10!86;UBERON:0002616!5.73e-10!49;UBERON:0003080!3.26e-09!40;UBERON:0002780!4.89e-09!39;UBERON:0001890!4.89e-09!39;UBERON:0006240!4.89e-09!39;UBERON:0002020!3.20e-08!34;UBERON:0000477!2.33e-07!154;UBERON:0002791!3.67e-07!29;UBERON:0003528!3.67e-07!29;UBERON:0001893!3.67e-07!29 | |ontology_enrichment_uberon=UBERON:0001017!4.66e-13!73;UBERON:0005743!4.66e-13!73;UBERON:0000073!5.07e-13!75;UBERON:0001016!5.07e-13!75;UBERON:0000033!9.63e-13!63;UBERON:0000025!1.47e-12!114;UBERON:0002346!4.54e-12!71;UBERON:0003075!4.54e-12!71;UBERON:0007284!4.54e-12!71;UBERON:0004121!6.86e-12!102;UBERON:0000924!6.86e-12!102;UBERON:0006601!6.86e-12!102;UBERON:0003056!1.23e-11!49;UBERON:0004111!3.05e-11!122;UBERON:0001049!6.16e-11!52;UBERON:0005068!6.16e-11!52;UBERON:0006241!6.16e-11!52;UBERON:0007135!6.16e-11!52;UBERON:0000153!7.06e-11!94;UBERON:0000955!3.13e-10!50;UBERON:0006238!3.13e-10!50;UBERON:0007811!3.88e-10!86;UBERON:0002616!5.73e-10!49;UBERON:0003080!3.26e-09!40;UBERON:0002780!4.89e-09!39;UBERON:0001890!4.89e-09!39;UBERON:0006240!4.89e-09!39;UBERON:0002020!3.20e-08!34;UBERON:0000477!2.33e-07!154;UBERON:0002791!3.67e-07!29;UBERON:0003528!3.67e-07!29;UBERON:0001893!3.67e-07!29 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0010314,7.68e-15,92;UBERON:0002346,1.30e-14,64;UBERON:0003075,1.30e-14,64;UBERON:0007284,1.30e-14,64;UBERON:0004121,9.03e-14,95;UBERON:0000924,9.03e-14,95;UBERON:0006601,9.03e-14,95;UBERON:0001017,4.66e-13,73;UBERON:0001016,5.07e-13,75;UBERON:0010371,7.19e-13,73;UBERON:0000025,1.47e-12,114;UBERON:0003056,1.23e-11,49;UBERON:0004111,3.05e-11,122;UBERON:0000073,4.10e-11,54;UBERON:0001049,6.16e-11,52;UBERON:0005068,6.16e-11,52;UBERON:0006241,6.16e-11,52;UBERON:0007135,6.16e-11,52;UBERON:0000955,1.16e-09,47;UBERON:0006238,1.16e-09,47;UBERON:0002616,2.11e-09,46;UBERON:0003080,3.26e-09,40;UBERON:0002780,4.89e-09,39;UBERON:0001890,4.89e-09,39;UBERON:0006240,4.89e-09,39;UBERON:0002020,3.20e-08,34;UBERON:0000483,2.84e-07,174;UBERON:0003528,3.67e-07,29;UBERON:0002791,3.67e-07,29;UBERON:0001893,3.67e-07,29;UBERON:0000119,9.70e-07,176 | |||
|phase1_expression=12.4916100741739,0.348975407639361,0.909998478779072,1.51232105653415,0.500895729946347,3.3575854382378,3.97141489012394,9.03863264091034,7.60259099619,7.95819389494778,9.07455231595176,9.89174771542172,5.82082481766099,5.94458736449182,1.99865857089398,2.63217847606774,2.79824751251259,4.10100814965709,3.42786084014347,2.97072756258621,5.6128571499706,7.14894848646374,6.00759515019551,1.91990907352088,2.98232065387321,2.29692785646008,1.7230479846363,1.07735616342945,1.14014051673824,1.26015064879965,1.55211357458713,5.71527606113668,7.38077745101484,0,3.75507105676657,2.99222361645286,3.06254034393554,4.18531630736908,4.6880120671428,2.61761871986899,0,0.683045484958446,0,14.3522372492158,13.584508783415,13.3989129078028,5.47673941043627,5.88667922227206,2.85592037554813,3.11087838518853,6.57936181639204,4.31257693094915,4.19456515144341,7.97898356212479,6.38578218370682,4.11615097657515,4.58453503902011,5.15672092277442,23.0640765379941,14.8117474196169,17.747279298173,3.72728985276045,5.33576877666684,2.2497492932035,4.94433181283487,2.8419204597844,2.99600110518405,4.61061966385865,22.5006458709397,14.7156472781543,19.1395714829758,9.71213346972932,9.05561017901615,18.4961106814581,16.4854210151367,9.19218786610021,11.0115880999389,12.6410464704336,13.2101618600369,20.44237459818,18.6634792948916,18.7528813400434,7.2587579740359,11.8180148106653,10.8486755921535,15.6153150301044,14.8066548031067,20.1311401491325,9.23859558664845,10.4288752947364,5.2175607966302,9.46466264679525,10.1995700056163,12.9528765993076,10.3964226791627,12.0967259516281,9.69066498909088,11.4188316127299,8.57293815189467,9.18682893726885,13.9434985578914,16.6824420638613,12.7402619853323,21.3320010945999,3.68034769719064,4.30711771307668,3.53867111510348,7.76450382089608,9.32176381129818,6.82833839698194,9.1947223186052,7.30717147949139,4.61230994512117,6.63179618431539,9.05433044944927,6.40899615781345,11.1237735480468,6.36237170447611,7.96149496754887,11.0001457964238,10.1587098491781,6.78825354389311,7.45567044872489,17.5668478206928,15.4990563041957,3.83185582812887,4.43315960671905,6.59893004092748,6.60765180779936,12.1330417917906,13.7250180845588,26.0104508873629,14.7750672163435,17.6443665557928,9.55825004973976,15.7374025175725,9.57290020192973,8.21086006026614,7.58168275301024,8.62811609134543,14.1831282829347,12.1848115349741,13.3245976055958,13.7141384230501,17.2812707844373,17.935920839879,17.8033276663485,10.6068382002996,15.5208954911646,17.3977593754394,15.1317966780996,8.76782929710299,8.61946472599353,7.3132954969655,10.4948889568051,14.3304672109315,8.42655824775882,6.17634977075316,5.68326998791185,11.1847917169171,16.4168241986767,13.3245925481151,13.9679393995274,12.0026181365916,11.5700334665534,12.7893669612724,14.7550370769791,15.5297905348335,12.671108443338,12.8050621981694,14.024904051433,11.4035990191759,8.78200461164202,11.0049263383505,13.24826675954,22.8448239482011,1.65209391491899,1.85115396664481,14.7168892869311,11.3795969211615,8.50525244725816,7.46229041106367,2.89091456998331,4.94586627892654,2.84717436926707,4.6115707322723,5.7807098024062,7.56034593756373,5.65395852645448,2.69645822596266,4.53889904736858,2.38969527905241,8.15571974098251,13.481324487948,3.38123207019241,7.33144780243131,8.92181440971078,9.67874314486396,11.1928670709935,8.85660887877613,7.53593893638599,7.65062416315163,13.3403682189217,5.6727335943472,7.66580080941492,6.2961391467759,5.07150303471257,8.92355491083942,6.87489799809833,6.61701116136864,13.2950885955529,16.748246204473,31.629005436018,23.4448797031157,23.7148631567066,24.752730038817,13.6342034276653,14.473305640901,6.46636165583116,13.0749074121634,11.0816183980578,11.2031756611624,11.4998221661366,6.365237782789,5.95109102215034,9.75668239288994,7.09358148477859,7.52979944805835,10.0456504254217,7.37384916220821,6.04397436530635,7.23245292907558,4.52373851817817,6.52686820582452,2.45882136509518,5.51873492609465,10.9174401191699,14.5342491374332,12.622990794004,17.6729649043061,14.1978698737316,13.2749173060857,15.9413314322271,11.4705023017225,10.2487390077901,9.6246020468203,12.1443210502468,11.1057226006299,15.0209355619679,13.1741739732941,9.9358059645788,12.8207234640424,14.3340524231147,9.73323725537959,3.98235415019888,6.79785781233948,4.83717691143602,5.65815239267694,5.90603785761546,8.60818414242997,7.75284879504663,9.81541069589265,7.84294232446387,7.26884543252377,1.05418608574999,5.15677716240934,12.9367050186439,16.5656206508805,8.66703181344455,12.8602221018955,18.0887038315119,15.3397183137781,13.3284706687718,8.22055362609418,7.74416636610244,9.32061111800809,7.93902232997863,10.7176064411962,7.26589920131575,9.58975506357678,8.59480876822583,7.38634048852776,4.66369338607761,15.0194494628513,3.93003025835061,6.60437977482312,4.8150577116125,1.50694765603753,1.77702496037333,3.88922894451088,6.4591803397665,8.25713568709582,6.08079884739465,3.81868247206045,13.6024477239888,10.1659733563424,8.96444328820951,9.82714991268003,6.55087691238533,6.60835297285622,9.4224939526883,6.80565449158477,3.49960427887841,4.34937519160848,2.25477175473676,19.7361840778052,17.8695169693665,17.3061557626202,11.7535439364735,13.5164900392623,14.6696548307192,20.7024971901881,19.8184160964594,7.48910774560619,5.76060012515731,8.53230025696081,10.1362607645082,7.70332178736204,9.35429925440124,9.13036147904155,8.54329825559439,9.97622231015741,7.67985541307802,7.97634954590366,8.30654192539498,8.16692099608408,9.25849867027648,7.69694733122636,6.07759891344159,11.1097887971454,11.3212836220773,10.0479519402613,7.89057696911169,4.25017106870819,7.69498149349846,6.41030684935428,3.85863082342319,3.00943262421218,10.1655331671072,12.889106622201,16.6139698897425,13.748254587495,13.7016503954128,9.06472676867641,10.8003600037089,18.463169332193,13.1411298605419,12.4262474820437,21.0688315595879,21.1483182902546,14.5123564891014,10.9398022680732,12.157563432423,10.2952364732008,8.22312892865976,10.3017528619447,10.5903339165299,8.33900798820532,8.87177549615839,8.86543804514558,11.143339388916,11.3324519756619,12.1188839496344,10.9547548995107,9.73428337936786,9.06673336179414,11.1263193216893,9.56792980873583,6.17164654293748,8.87379030796687,11.4449371174714,9.1568242478367,10.7284693673477,10.9152844180263,8.41468675214754,8.94437018888666,10.0495044245938,8.97827634652382,10.3212465768031,12.6085737440721,9.41231399290286,11.6202630889474,7.9091710502268,12.2407183189594,9.82512755470715,10.7435527024149,10.9034349279241,12.1325280515734,10.6659204385394 | |phase1_expression=12.4916100741739,0.348975407639361,0.909998478779072,1.51232105653415,0.500895729946347,3.3575854382378,3.97141489012394,9.03863264091034,7.60259099619,7.95819389494778,9.07455231595176,9.89174771542172,5.82082481766099,5.94458736449182,1.99865857089398,2.63217847606774,2.79824751251259,4.10100814965709,3.42786084014347,2.97072756258621,5.6128571499706,7.14894848646374,6.00759515019551,1.91990907352088,2.98232065387321,2.29692785646008,1.7230479846363,1.07735616342945,1.14014051673824,1.26015064879965,1.55211357458713,5.71527606113668,7.38077745101484,0,3.75507105676657,2.99222361645286,3.06254034393554,4.18531630736908,4.6880120671428,2.61761871986899,0,0.683045484958446,0,14.3522372492158,13.584508783415,13.3989129078028,5.47673941043627,5.88667922227206,2.85592037554813,3.11087838518853,6.57936181639204,4.31257693094915,4.19456515144341,7.97898356212479,6.38578218370682,4.11615097657515,4.58453503902011,5.15672092277442,23.0640765379941,14.8117474196169,17.747279298173,3.72728985276045,5.33576877666684,2.2497492932035,4.94433181283487,2.8419204597844,2.99600110518405,4.61061966385865,22.5006458709397,14.7156472781543,19.1395714829758,9.71213346972932,9.05561017901615,18.4961106814581,16.4854210151367,9.19218786610021,11.0115880999389,12.6410464704336,13.2101618600369,20.44237459818,18.6634792948916,18.7528813400434,7.2587579740359,11.8180148106653,10.8486755921535,15.6153150301044,14.8066548031067,20.1311401491325,9.23859558664845,10.4288752947364,5.2175607966302,9.46466264679525,10.1995700056163,12.9528765993076,10.3964226791627,12.0967259516281,9.69066498909088,11.4188316127299,8.57293815189467,9.18682893726885,13.9434985578914,16.6824420638613,12.7402619853323,21.3320010945999,3.68034769719064,4.30711771307668,3.53867111510348,7.76450382089608,9.32176381129818,6.82833839698194,9.1947223186052,7.30717147949139,4.61230994512117,6.63179618431539,9.05433044944927,6.40899615781345,11.1237735480468,6.36237170447611,7.96149496754887,11.0001457964238,10.1587098491781,6.78825354389311,7.45567044872489,17.5668478206928,15.4990563041957,3.83185582812887,4.43315960671905,6.59893004092748,6.60765180779936,12.1330417917906,13.7250180845588,26.0104508873629,14.7750672163435,17.6443665557928,9.55825004973976,15.7374025175725,9.57290020192973,8.21086006026614,7.58168275301024,8.62811609134543,14.1831282829347,12.1848115349741,13.3245976055958,13.7141384230501,17.2812707844373,17.935920839879,17.8033276663485,10.6068382002996,15.5208954911646,17.3977593754394,15.1317966780996,8.76782929710299,8.61946472599353,7.3132954969655,10.4948889568051,14.3304672109315,8.42655824775882,6.17634977075316,5.68326998791185,11.1847917169171,16.4168241986767,13.3245925481151,13.9679393995274,12.0026181365916,11.5700334665534,12.7893669612724,14.7550370769791,15.5297905348335,12.671108443338,12.8050621981694,14.024904051433,11.4035990191759,8.78200461164202,11.0049263383505,13.24826675954,22.8448239482011,1.65209391491899,1.85115396664481,14.7168892869311,11.3795969211615,8.50525244725816,7.46229041106367,2.89091456998331,4.94586627892654,2.84717436926707,4.6115707322723,5.7807098024062,7.56034593756373,5.65395852645448,2.69645822596266,4.53889904736858,2.38969527905241,8.15571974098251,13.481324487948,3.38123207019241,7.33144780243131,8.92181440971078,9.67874314486396,11.1928670709935,8.85660887877613,7.53593893638599,7.65062416315163,13.3403682189217,5.6727335943472,7.66580080941492,6.2961391467759,5.07150303471257,8.92355491083942,6.87489799809833,6.61701116136864,13.2950885955529,16.748246204473,31.629005436018,23.4448797031157,23.7148631567066,24.752730038817,13.6342034276653,14.473305640901,6.46636165583116,13.0749074121634,11.0816183980578,11.2031756611624,11.4998221661366,6.365237782789,5.95109102215034,9.75668239288994,7.09358148477859,7.52979944805835,10.0456504254217,7.37384916220821,6.04397436530635,7.23245292907558,4.52373851817817,6.52686820582452,2.45882136509518,5.51873492609465,10.9174401191699,14.5342491374332,12.622990794004,17.6729649043061,14.1978698737316,13.2749173060857,15.9413314322271,11.4705023017225,10.2487390077901,9.6246020468203,12.1443210502468,11.1057226006299,15.0209355619679,13.1741739732941,9.9358059645788,12.8207234640424,14.3340524231147,9.73323725537959,3.98235415019888,6.79785781233948,4.83717691143602,5.65815239267694,5.90603785761546,8.60818414242997,7.75284879504663,9.81541069589265,7.84294232446387,7.26884543252377,1.05418608574999,5.15677716240934,12.9367050186439,16.5656206508805,8.66703181344455,12.8602221018955,18.0887038315119,15.3397183137781,13.3284706687718,8.22055362609418,7.74416636610244,9.32061111800809,7.93902232997863,10.7176064411962,7.26589920131575,9.58975506357678,8.59480876822583,7.38634048852776,4.66369338607761,15.0194494628513,3.93003025835061,6.60437977482312,4.8150577116125,1.50694765603753,1.77702496037333,3.88922894451088,6.4591803397665,8.25713568709582,6.08079884739465,3.81868247206045,13.6024477239888,10.1659733563424,8.96444328820951,9.82714991268003,6.55087691238533,6.60835297285622,9.4224939526883,6.80565449158477,3.49960427887841,4.34937519160848,2.25477175473676,19.7361840778052,17.8695169693665,17.3061557626202,11.7535439364735,13.5164900392623,14.6696548307192,20.7024971901881,19.8184160964594,7.48910774560619,5.76060012515731,8.53230025696081,10.1362607645082,7.70332178736204,9.35429925440124,9.13036147904155,8.54329825559439,9.97622231015741,7.67985541307802,7.97634954590366,8.30654192539498,8.16692099608408,9.25849867027648,7.69694733122636,6.07759891344159,11.1097887971454,11.3212836220773,10.0479519402613,7.89057696911169,4.25017106870819,7.69498149349846,6.41030684935428,3.85863082342319,3.00943262421218,10.1655331671072,12.889106622201,16.6139698897425,13.748254587495,13.7016503954128,9.06472676867641,10.8003600037089,18.463169332193,13.1411298605419,12.4262474820437,21.0688315595879,21.1483182902546,14.5123564891014,10.9398022680732,12.157563432423,10.2952364732008,8.22312892865976,10.3017528619447,10.5903339165299,8.33900798820532,8.87177549615839,8.86543804514558,11.143339388916,11.3324519756619,12.1188839496344,10.9547548995107,9.73428337936786,9.06673336179414,11.1263193216893,9.56792980873583,6.17164654293748,8.87379030796687,11.4449371174714,9.1568242478367,10.7284693673477,10.9152844180263,8.41468675214754,8.94437018888666,10.0495044245938,8.97827634652382,10.3212465768031,12.6085737440721,9.41231399290286,11.6202630889474,7.9091710502268,12.2407183189594,9.82512755470715,10.7435527024149,10.9034349279241,12.1325280515734,10.6659204385394 | ||
|short_description=p1@Hsf2 | |short_description=p1@Hsf2 | ||
}} | }} |
Revision as of 18:22, 14 November 2012
Short description: | p1@Hsf2 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Hsf2_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENSMUST00000079833, ENSMUST00000081139, NM_008297, uc007fck.2_5end |
EntrezGene: | Hsf2 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neuron | 1.44e-09 | 33 |
neuronal stem cell | 1.44e-09 | 33 |
neuroblast | 1.44e-09 | 33 |
electrically signaling cell | 1.44e-09 | 33 |
electrically responsive cell | 1.90e-08 | 39 |
electrically active cell | 1.90e-08 | 39 |
CNS neuron (sensu Vertebrata) | 9.02e-08 | 23 |
neuroblast (sensu Vertebrata) | 9.02e-08 | 23 |
Ontology term | p-value | n |
---|---|---|
structure with developmental contribution from neural crest | 7.68e-15 | 92 |
neurectoderm | 1.30e-14 | 64 |
neural plate | 1.30e-14 | 64 |
presumptive neural plate | 1.30e-14 | 64 |
ectoderm-derived structure | 9.03e-14 | 95 |
ectoderm | 9.03e-14 | 95 |
presumptive ectoderm | 9.03e-14 | 95 |
central nervous system | 4.66e-13 | 73 |
nervous system | 5.07e-13 | 75 |
ecto-epithelium | 7.19e-13 | 73 |
tube | 1.47e-12 | 114 |
pre-chordal neural plate | 1.23e-11 | 49 |
anatomical conduit | 3.05e-11 | 122 |
regional part of nervous system | 4.10e-11 | 54 |
neural tube | 6.16e-11 | 52 |
neural rod | 6.16e-11 | 52 |
future spinal cord | 6.16e-11 | 52 |
neural keel | 6.16e-11 | 52 |
brain | 1.16e-09 | 47 |
future brain | 1.16e-09 | 47 |
regional part of brain | 2.11e-09 | 46 |
anterior neural tube | 3.26e-09 | 40 |
regional part of forebrain | 4.89e-09 | 39 |
forebrain | 4.89e-09 | 39 |
future forebrain | 4.89e-09 | 39 |
gray matter | 3.20e-08 | 34 |
epithelium | 2.84e-07 | 174 |
brain grey matter | 3.67e-07 | 29 |
regional part of telencephalon | 3.67e-07 | 29 |
telencephalon | 3.67e-07 | 29 |
cell layer | 9.70e-07 | 176 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.