FFCP PHASE1:Mm9::chr9:109445587..109445590,-: Difference between revisions
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|id=chr9:109445587..109445590,- | |id=chr9:109445587..109445590,- | ||
|ontology_enrichment_celltype=CL:0002614!6.18e-09!3 | |ontology_enrichment_celltype=CL:0002614!6.18e-09!3 | ||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002298!4.57e-26!6;UBERON:0000955!5.27e-20!50;UBERON:0006238!5.27e-20!50;UBERON:0001049!3.60e-19!52;UBERON:0005068!3.60e-19!52;UBERON:0006241!3.60e-19!52;UBERON:0007135!3.60e-19!52;UBERON:0002616!3.20e-17!49;UBERON:0001017!1.24e-15!73;UBERON:0005743!1.24e-15!73;UBERON:0000033!1.32e-15!63;UBERON:0000073!3.51e-15!75;UBERON:0001016!3.51e-15!75;UBERON:0002950!1.22e-14!4;UBERON:0001891!1.22e-14!4;UBERON:0009616!1.22e-14!4;UBERON:0002346!1.11e-13!71;UBERON:0003075!1.11e-13!71;UBERON:0007284!1.11e-13!71;UBERON:0001896!1.27e-13!2;UBERON:0005290!1.27e-13!2;UBERON:0010096!1.27e-13!2;UBERON:0003080!7.55e-12!40;UBERON:0007023!1.49e-11!51;UBERON:0007811!4.67e-11!86;UBERON:0004121!8.79e-11!102;UBERON:0000924!8.79e-11!102;UBERON:0006601!8.79e-11!102;UBERON:0004733!5.10e-10!6;UBERON:0004732!5.10e-10!6;UBERON:0002028!5.10e-10!6;UBERON:0007277!5.10e-10!6;UBERON:0000153!5.43e-10!94;UBERON:0002780!1.60e-09!39;UBERON:0001890!1.60e-09!39;UBERON:0006240!1.60e-09!39;UBERON:0003056!1.70e-09!49;UBERON:0002038!6.18e-09!3;UBERON:0002308!6.18e-09!3;UBERON:0009663!6.18e-09!3;UBERON:0009661!6.18e-09!3;UBERON:0006331!6.18e-09!3;UBERON:0000125!6.18e-09!3;UBERON:0003076!1.04e-08!12;UBERON:0003057!1.04e-08!12;UBERON:0002259!4.65e-08!1;UBERON:0002314!4.65e-08!1;UBERON:0006777!4.65e-08!1;UBERON:0005882!4.65e-08!1;UBERON:0000025!5.77e-08!114;UBERON:0002420!1.49e-07!8;UBERON:0007245!1.49e-07!8;UBERON:0010009!1.49e-07!8;UBERON:0010011!1.49e-07!8;UBERON:0000454!1.49e-07!8;UBERON:0002791!1.96e-07!29;UBERON:0003528!1.96e-07!29;UBERON:0001893!1.96e-07!29;UBERON:0004111!2.44e-07!122 | |ontology_enrichment_uberon=UBERON:0002298!4.57e-26!6;UBERON:0000955!5.27e-20!50;UBERON:0006238!5.27e-20!50;UBERON:0001049!3.60e-19!52;UBERON:0005068!3.60e-19!52;UBERON:0006241!3.60e-19!52;UBERON:0007135!3.60e-19!52;UBERON:0002616!3.20e-17!49;UBERON:0001017!1.24e-15!73;UBERON:0005743!1.24e-15!73;UBERON:0000033!1.32e-15!63;UBERON:0000073!3.51e-15!75;UBERON:0001016!3.51e-15!75;UBERON:0002950!1.22e-14!4;UBERON:0001891!1.22e-14!4;UBERON:0009616!1.22e-14!4;UBERON:0002346!1.11e-13!71;UBERON:0003075!1.11e-13!71;UBERON:0007284!1.11e-13!71;UBERON:0001896!1.27e-13!2;UBERON:0005290!1.27e-13!2;UBERON:0010096!1.27e-13!2;UBERON:0003080!7.55e-12!40;UBERON:0007023!1.49e-11!51;UBERON:0007811!4.67e-11!86;UBERON:0004121!8.79e-11!102;UBERON:0000924!8.79e-11!102;UBERON:0006601!8.79e-11!102;UBERON:0004733!5.10e-10!6;UBERON:0004732!5.10e-10!6;UBERON:0002028!5.10e-10!6;UBERON:0007277!5.10e-10!6;UBERON:0000153!5.43e-10!94;UBERON:0002780!1.60e-09!39;UBERON:0001890!1.60e-09!39;UBERON:0006240!1.60e-09!39;UBERON:0003056!1.70e-09!49;UBERON:0002038!6.18e-09!3;UBERON:0002308!6.18e-09!3;UBERON:0009663!6.18e-09!3;UBERON:0009661!6.18e-09!3;UBERON:0006331!6.18e-09!3;UBERON:0000125!6.18e-09!3;UBERON:0003076!1.04e-08!12;UBERON:0003057!1.04e-08!12;UBERON:0002259!4.65e-08!1;UBERON:0002314!4.65e-08!1;UBERON:0006777!4.65e-08!1;UBERON:0005882!4.65e-08!1;UBERON:0000025!5.77e-08!114;UBERON:0002420!1.49e-07!8;UBERON:0007245!1.49e-07!8;UBERON:0010009!1.49e-07!8;UBERON:0010011!1.49e-07!8;UBERON:0000454!1.49e-07!8;UBERON:0002791!1.96e-07!29;UBERON:0003528!1.96e-07!29;UBERON:0001893!1.96e-07!29;UBERON:0004111!2.44e-07!122 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0001896,6.10e-20,2;UBERON:0002298,6.10e-20,2;UBERON:0005290,6.10e-20,2;UBERON:0010096,6.10e-20,2;UBERON:0000955,4.65e-13,47;UBERON:0006238,4.65e-13,47;UBERON:0007023,4.45e-12,51;UBERON:0001049,9.14e-12,52;UBERON:0005068,9.14e-12,52;UBERON:0006241,9.14e-12,52;UBERON:0007135,9.14e-12,52;UBERON:0002259,1.83e-11,1;UBERON:0002314,1.83e-11,1;UBERON:0004061,1.83e-11,1;UBERON:0006777,1.83e-11,1;UBERON:0005882,1.83e-11,1;UBERON:0001017,1.45e-10,73;UBERON:0001016,2.82e-10,75;UBERON:0002616,3.15e-10,46;UBERON:0002346,1.66e-09,64;UBERON:0003075,1.66e-09,64;UBERON:0007284,1.66e-09,64;UBERON:0000073,1.11e-08,54;UBERON:0010371,2.71e-08,73;UBERON:0004121,4.90e-08,95;UBERON:0000924,4.90e-08,95;UBERON:0006601,4.90e-08,95;UBERON:0003076,7.70e-08,12;UBERON:0003057,7.70e-08,12;UBERON:0004733,2.73e-07,6;UBERON:0004732,2.73e-07,6;UBERON:0002028,2.73e-07,6;UBERON:0007277,2.73e-07,6 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.279182999001381,0,0.15279824777681,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.878342391034642,0,0,0,0,0,8.83764772488454,3.66000482254901,0,2.43354048269187,0,3.94797284663164,0.162241263067758,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.89260953707715,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.72936002979246,1.28932855251423,0,0,0,0,0,0,0,0,0,0,0,2.89189184779626,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.78137953015765,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.45032120322422,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.279182999001381,0,0.15279824777681,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.878342391034642,0,0,0,0,0,8.83764772488454,3.66000482254901,0,2.43354048269187,0,3.94797284663164,0.162241263067758,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.89260953707715,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.72936002979246,1.28932855251423,0,0,0,0,0,0,0,0,0,0,0,2.89189184779626,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.78137953015765,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.45032120322422,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p@chr9:109445587..109445590,- | |short_description=p@chr9:109445587..109445590,- | ||
}} | }} |
Revision as of 11:28, 13 November 2012
Short description: | p@chr9:109445587..109445590, - |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr9:109445587..109445590, - |
Coexpression cluster: | MCL_coexpression_mm9:20 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
medulla oblongata | 6.10e-20 | 2 |
brainstem | 6.10e-20 | 2 |
myelencephalon | 6.10e-20 | 2 |
future myelencephalon | 6.10e-20 | 2 |
brain | 4.65e-13 | 47 |
future brain | 4.65e-13 | 47 |
adult organism | 4.45e-12 | 51 |
neural tube | 9.14e-12 | 52 |
neural rod | 9.14e-12 | 52 |
future spinal cord | 9.14e-12 | 52 |
neural keel | 9.14e-12 | 52 |
corpora quadrigemina | 1.83e-11 | 1 |
midbrain tectum | 1.83e-11 | 1 |
neural tube mantle layer | 1.83e-11 | 1 |
tectal plate | 1.83e-11 | 1 |
neural tube alar plate | 1.83e-11 | 1 |
central nervous system | 1.45e-10 | 73 |
nervous system | 2.82e-10 | 75 |
regional part of brain | 3.15e-10 | 46 |
neurectoderm | 1.66e-09 | 64 |
neural plate | 1.66e-09 | 64 |
presumptive neural plate | 1.66e-09 | 64 |
regional part of nervous system | 1.11e-08 | 54 |
ecto-epithelium | 2.71e-08 | 73 |
ectoderm-derived structure | 4.90e-08 | 95 |
ectoderm | 4.90e-08 | 95 |
presumptive ectoderm | 4.90e-08 | 95 |
posterior neural tube | 7.70e-08 | 12 |
chordal neural plate | 7.70e-08 | 12 |
segmental subdivision of hindbrain | 2.73e-07 | 6 |
segmental subdivision of nervous system | 2.73e-07 | 6 |
hindbrain | 2.73e-07 | 6 |
presumptive hindbrain | 2.73e-07 | 6 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.