FFCP PHASE1:Mm9::chr10:118151492..118151509,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 8: | Line 8: | ||
|id=chr10:118151492..118151509,+ | |id=chr10:118151492..118151509,+ | ||
|ontology_enrichment_celltype=CL:0000624!4.24e-14!8;CL:0000084!3.12e-13!11;CL:0000827!3.12e-13!11;CL:0000791!1.85e-12!9;CL:0000789!1.85e-12!9;CL:0002420!1.85e-12!9;CL:0002419!1.85e-12!9;CL:0000790!1.85e-12!9;CL:0000838!4.77e-12!12;CL:0000542!4.79e-11!13;CL:0000051!4.79e-11!13;CL:0002031!1.36e-10!25;CL:0000893!1.09e-08!6;CL:0002489!1.09e-08!6;CL:0000898!1.09e-08!6;CL:0000809!1.09e-08!6;CL:0000810!1.09e-08!6;CL:0000895!1.09e-08!6;CL:0000808!1.09e-08!6;CL:0000894!1.09e-08!6;CL:0000806!1.09e-08!6;CL:0000807!1.09e-08!6;CL:0000805!1.09e-08!6;CL:0002425!1.09e-08!6;CL:0002436!1.09e-08!6;CL:0002427!1.09e-08!6;CL:0002428!1.09e-08!6;CL:0002429!1.09e-08!6;CL:0002433!1.09e-08!6;CL:0002431!1.09e-08!6;CL:0002432!1.09e-08!6;CL:0000738!3.24e-08!17;CL:0002087!3.24e-08!17;CL:0000988!7.08e-08!32;CL:0002032!7.08e-08!32;CL:0000037!7.08e-08!32;CL:0000566!7.08e-08!32;CL:0000837!7.08e-08!32 | |ontology_enrichment_celltype=CL:0000624!4.24e-14!8;CL:0000084!3.12e-13!11;CL:0000827!3.12e-13!11;CL:0000791!1.85e-12!9;CL:0000789!1.85e-12!9;CL:0002420!1.85e-12!9;CL:0002419!1.85e-12!9;CL:0000790!1.85e-12!9;CL:0000838!4.77e-12!12;CL:0000542!4.79e-11!13;CL:0000051!4.79e-11!13;CL:0002031!1.36e-10!25;CL:0000893!1.09e-08!6;CL:0002489!1.09e-08!6;CL:0000898!1.09e-08!6;CL:0000809!1.09e-08!6;CL:0000810!1.09e-08!6;CL:0000895!1.09e-08!6;CL:0000808!1.09e-08!6;CL:0000894!1.09e-08!6;CL:0000806!1.09e-08!6;CL:0000807!1.09e-08!6;CL:0000805!1.09e-08!6;CL:0002425!1.09e-08!6;CL:0002436!1.09e-08!6;CL:0002427!1.09e-08!6;CL:0002428!1.09e-08!6;CL:0002429!1.09e-08!6;CL:0002433!1.09e-08!6;CL:0002431!1.09e-08!6;CL:0002432!1.09e-08!6;CL:0000738!3.24e-08!17;CL:0002087!3.24e-08!17;CL:0000988!7.08e-08!32;CL:0002032!7.08e-08!32;CL:0000037!7.08e-08!32;CL:0000566!7.08e-08!32;CL:0000837!7.08e-08!32 | ||
|ontology_enrichment_celltype_v019_2=CL:0000815,1.74e-18,1;CL:0000792,1.74e-18,1;CL:0000624,1.08e-09,8;CL:0000791,1.00e-08,9;CL:0000789,1.00e-08,9;CL:0002420,1.00e-08,9;CL:0002419,1.00e-08,9;CL:0000790,1.00e-08,9;CL:0000084,2.59e-07,11;CL:0000827,2.59e-07,11;CL:0000838,8.83e-07,12 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004175!9.99e-09!9 | |ontology_enrichment_uberon=UBERON:0004175!9.99e-09!9 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0001301,1.74e-24,3;UBERON:0006555,1.74e-24,3;UBERON:0005103,1.74e-24,3;UBERON:0000083,1.74e-24,3;UBERON:0009201,1.74e-24,3;UBERON:0004819,1.74e-24,3;UBERON:0006553,1.74e-24,3;UBERON:0003074,1.74e-24,3;UBERON:0003060,1.74e-24,3;UBERON:0000080,1.16e-18,4;UBERON:0005904,1.16e-18,4;UBERON:0006947,1.16e-18,4;UBERON:0002120,1.16e-18,4;UBERON:0004054,1.16e-18,4;UBERON:0004875,1.16e-18,4;UBERON:0004876,1.16e-18,4;UBERON:0005721,1.16e-18,4;UBERON:0005754,1.16e-18,4;UBERON:0007297,1.16e-18,4;UBERON:0000058,3.95e-11,7;UBERON:0001343,4.13e-10,2;UBERON:0004910,4.13e-10,2;UBERON:0004909,4.13e-10,2;UBERON:0005154,4.13e-10,2;UBERON:0005295,4.13e-10,2;UBERON:0005297,4.13e-10,2;UBERON:0005294,4.13e-10,2;UBERON:0010141,4.13e-10,2;UBERON:0005891,4.13e-10,2;UBERON:0004175,7.02e-09,9;UBERON:0003887,4.34e-08,10;UBERON:0004871,3.64e-07,3 | |||
|phase1_expression=0,0,0,0,0,0,0,1.16210991097419,0,0.468129052643987,0.171217968225505,0,1.54080656938085,0.961624426608971,0,0.202475267389826,0,0.157731082679119,0.411343300817216,0,0,0.0992909512008853,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.204169356262369,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.725362142011344,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.34255163915718,0.517875767294343,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.86136032403214,22.492325500597,0,0,0,0,0,0.0680364991513279,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.330418782983798,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.123397163921801,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.329940245945071,0,0,0,0,0,0,0,0,0,0,1.05418608574999,0,0,0,0,0,0,0,0,0,0,0.21183207086382,0,0,0,0,0,0,0,0.18542530201051,0,0,0,0,0,0,0,0.139951452323658,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.194915761479505,0,0,0.226730383615211,0,0,0,0,0.375364950902364,0,0.214368379079066,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0574354689556133,0,0,0,0,0,0,0,0,0,0,0,0.182927972872773,0,0,0,0,0,0,0,0,0,0,0,0,0,0.231867835620421 | |phase1_expression=0,0,0,0,0,0,0,1.16210991097419,0,0.468129052643987,0.171217968225505,0,1.54080656938085,0.961624426608971,0,0.202475267389826,0,0.157731082679119,0.411343300817216,0,0,0.0992909512008853,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.204169356262369,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.725362142011344,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.34255163915718,0.517875767294343,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.86136032403214,22.492325500597,0,0,0,0,0,0.0680364991513279,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.330418782983798,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.123397163921801,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.329940245945071,0,0,0,0,0,0,0,0,0,0,1.05418608574999,0,0,0,0,0,0,0,0,0,0,0.21183207086382,0,0,0,0,0,0,0,0.18542530201051,0,0,0,0,0,0,0,0.139951452323658,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.194915761479505,0,0,0.226730383615211,0,0,0,0,0.375364950902364,0,0.214368379079066,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0574354689556133,0,0,0,0,0,0,0,0,0,0,0,0.182927972872773,0,0,0,0,0,0,0,0,0,0,0,0,0,0.231867835620421 | ||
|short_description=p@chr10:118151492..118151509,+ | |short_description=p@chr10:118151492..118151509,+ | ||
}} | }} |
Revision as of 22:30, 14 November 2012
Short description: | p@chr10:118151492..118151509, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr10:118151492..118151509, + |
Coexpression cluster: | MCL_coexpression_mm9:9 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
regulatory T cell | 1.74e-18 | 1 |
CD4-positive, CD25-positive, alpha-beta regulatory T cell | 1.74e-18 | 1 |
CD4-positive, alpha-beta T cell | 1.08e-09 | 8 |
mature alpha-beta T cell | 1.00e-08 | 9 |
alpha-beta T cell | 1.00e-08 | 9 |
immature T cell | 1.00e-08 | 9 |
mature T cell | 1.00e-08 | 9 |
immature alpha-beta T cell | 1.00e-08 | 9 |
T cell | 2.59e-07 | 11 |
pro-T cell | 2.59e-07 | 11 |
lymphoid lineage restricted progenitor cell | 8.83e-07 | 12 |
Ontology term | p-value | n |
---|---|---|
epididymis | 1.74e-24 | 3 |
excretory tube | 1.74e-24 | 3 |
mesonephric epithelium | 1.74e-24 | 3 |
mesonephric tubule | 1.74e-24 | 3 |
nephric duct | 1.74e-24 | 3 |
kidney epithelium | 1.74e-24 | 3 |
renal duct | 1.74e-24 | 3 |
mesonephric duct | 1.74e-24 | 3 |
pronephric duct | 1.74e-24 | 3 |
mesonephros | 1.16e-18 | 4 |
duct of male reproductive system | 1.16e-18 | 4 |
male genital duct | 1.16e-18 | 4 |
pronephros | 1.16e-18 | 4 |
internal male genitalia | 1.16e-18 | 4 |
nephrogenic cord | 1.16e-18 | 4 |
urogenital ridge | 1.16e-18 | 4 |
pronephric mesoderm | 1.16e-18 | 4 |
rostral part of nephrogenic cord | 1.16e-18 | 4 |
presumptive pronephric mesoderm | 1.16e-18 | 4 |
duct | 3.95e-11 | 7 |
seminiferous tubule of testis | 4.13e-10 | 2 |
epithelium of male gonad | 4.13e-10 | 2 |
epithelium of gonad | 4.13e-10 | 2 |
epithelial cord | 4.13e-10 | 2 |
sex cord | 4.13e-10 | 2 |
testis sex cord | 4.13e-10 | 2 |
genital ridge | 4.13e-10 | 2 |
primitive sex cord of indifferent gonad | 4.13e-10 | 2 |
coelomic epithelium | 4.13e-10 | 2 |
internal genitalia | 7.02e-09 | 9 |
intraembryonic coelom | 4.34e-08 | 10 |
somatic layer of lateral plate mesoderm | 3.64e-07 | 3 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.