FFCP PHASE1:Mm9::chr3:68376348..68376359,+: Difference between revisions
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|id=chr3:68376348..68376359,+ | |id=chr3:68376348..68376359,+ | ||
|ontology_enrichment_celltype=CL:0000221!5.59e-17!44;CL:0000133!5.59e-17!44;CL:0000540!6.16e-17!33;CL:0000047!6.16e-17!33;CL:0000031!6.16e-17!33;CL:0000404!6.16e-17!33;CL:0002319!2.34e-16!43;CL:0000393!3.49e-12!39;CL:0000211!3.49e-12!39;CL:0000055!9.73e-12!50;CL:0000117!5.72e-11!23;CL:0000337!5.72e-11!23 | |ontology_enrichment_celltype=CL:0000221!5.59e-17!44;CL:0000133!5.59e-17!44;CL:0000540!6.16e-17!33;CL:0000047!6.16e-17!33;CL:0000031!6.16e-17!33;CL:0000404!6.16e-17!33;CL:0002319!2.34e-16!43;CL:0000393!3.49e-12!39;CL:0000211!3.49e-12!39;CL:0000055!9.73e-12!50;CL:0000117!5.72e-11!23;CL:0000337!5.72e-11!23 | ||
|ontology_enrichment_celltype_v019_2=CL:0000540,5.49e-24,33;CL:0000047,5.49e-24,33;CL:0000031,5.49e-24,33;CL:0000404,5.49e-24,33;CL:0000221,1.08e-23,44;CL:0000133,1.08e-23,44;CL:0002319,8.64e-23,43;CL:0000393,1.92e-18,39;CL:0000211,1.92e-18,39;CL:0000117,2.84e-15,23;CL:0000337,2.84e-15,23;CL:0002321,5.19e-10,70;CL:0000107,5.49e-09,9 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
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|ontology_enrichment_uberon_v019_2=UBERON:0001016,3.10e-42,75;UBERON:0001017,1.34e-40,73;UBERON:0004121,8.61e-37,95;UBERON:0000924,8.61e-37,95;UBERON:0006601,8.61e-37,95;UBERON:0002346,1.25e-29,64;UBERON:0003075,1.25e-29,64;UBERON:0007284,1.25e-29,64;UBERON:0000073,6.87e-28,54;UBERON:0010371,1.41e-26,73;UBERON:0001049,2.38e-26,52;UBERON:0005068,2.38e-26,52;UBERON:0006241,2.38e-26,52;UBERON:0007135,2.38e-26,52;UBERON:0002020,1.32e-25,34;UBERON:0000955,2.74e-23,47;UBERON:0006238,2.74e-23,47;UBERON:0003528,1.17e-22,29;UBERON:0002791,1.17e-22,29;UBERON:0001893,1.17e-22,29;UBERON:0002616,1.96e-22,46;UBERON:0003056,9.12e-20,49;UBERON:0003080,2.19e-19,40;UBERON:0002780,1.31e-18,39;UBERON:0001890,1.31e-18,39;UBERON:0006240,1.31e-18,39;UBERON:0000956,3.32e-17,21;UBERON:0001869,3.32e-17,21;UBERON:0000203,3.32e-17,21;UBERON:0010314,3.46e-17,92;UBERON:0002619,1.86e-14,17;UBERON:0002021,8.24e-12,10;UBERON:0000411,8.24e-12,10;UBERON:0001950,8.24e-12,10;UBERON:0000010,3.36e-10,11;UBERON:0002410,5.49e-09,9;UBERON:0003076,1.76e-07,12;UBERON:0003057,1.76e-07,12 | |||
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| ||
|short_description=p3@Iqcj-schip1,p4@Schip1 | |short_description=p3@Iqcj-schip1,p4@Schip1 | ||
}} | }} |
Revision as of 02:48, 15 November 2012
Short description: | p3@Iqcj-schip1, p4@Schip1 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_3_at_Iqcj-schip1_5end, CAGE_peak_4_at_Schip1_5end |
Coexpression cluster: | MCL_coexpression_mm9:2 |
Association with transcript: | 58bp_to_ENSMUST00000170788, NM_013928, uc008plt.2_5end |
EntrezGene: | 100505386,30953 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neuron | 5.49e-24 | 33 |
neuronal stem cell | 5.49e-24 | 33 |
neuroblast | 5.49e-24 | 33 |
electrically signaling cell | 5.49e-24 | 33 |
ectodermal cell | 1.08e-23 | 44 |
neurectodermal cell | 1.08e-23 | 44 |
neural cell | 8.64e-23 | 43 |
electrically responsive cell | 1.92e-18 | 39 |
electrically active cell | 1.92e-18 | 39 |
CNS neuron (sensu Vertebrata) | 2.84e-15 | 23 |
neuroblast (sensu Vertebrata) | 2.84e-15 | 23 |
embryonic cell | 5.19e-10 | 70 |
autonomic neuron | 5.49e-09 | 9 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.