FFCP PHASE1:Hg19::chr6:160103621..160103639,+: Difference between revisions
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|ontology_enrichment_celltype=CL:0002057!6.83e-28!42;CL:0000860!3.57e-25!45;CL:0002194!1.83e-17!63;CL:0000576!1.83e-17!63;CL:0000040!1.83e-17!63;CL:0000559!1.83e-17!63;CL:0000766!1.39e-16!76;CL:0002009!1.50e-16!65;CL:0000839!2.08e-15!70;CL:0000557!5.09e-15!71;CL:0000763!6.89e-08!112;CL:0000049!6.89e-08!112;CL:0002087!5.93e-07!119;CL:0000034!8.21e-07!444;CL:0000723!9.75e-07!436 | |ontology_enrichment_celltype=CL:0002057!6.83e-28!42;CL:0000860!3.57e-25!45;CL:0002194!1.83e-17!63;CL:0000576!1.83e-17!63;CL:0000040!1.83e-17!63;CL:0000559!1.83e-17!63;CL:0000766!1.39e-16!76;CL:0002009!1.50e-16!65;CL:0000839!2.08e-15!70;CL:0000557!5.09e-15!71;CL:0000763!6.89e-08!112;CL:0000049!6.89e-08!112;CL:0002087!5.93e-07!119;CL:0000034!8.21e-07!444;CL:0000723!9.75e-07!436 | ||
|ontology_enrichment_celltype_v019=CL:0000860;3.31e-34;33!CL:0002057;3.31e-34;33!CL:0000473;3.88e-24;39!CL:0000234;3.88e-24;39!CL:0000576;4.71e-15;48!CL:0000766;1.38e-11;69!CL:0000214;1.18e-09;3!CL:0000775;1.81e-09;3!CL:0000153;6.77e-07;9!CL:0000447;6.77e-07;9!CL:0000763;7.76e-07;100 | |ontology_enrichment_celltype_v019=CL:0000860;3.31e-34;33!CL:0002057;3.31e-34;33!CL:0000473;3.88e-24;39!CL:0000234;3.88e-24;39!CL:0000576;4.71e-15;48!CL:0000766;1.38e-11;69!CL:0000214;1.18e-09;3!CL:0000775;1.81e-09;3!CL:0000153;6.77e-07;9!CL:0000447;6.77e-07;9!CL:0000763;7.76e-07;100 | ||
|ontology_enrichment_celltype_v019_2=CL:0000860,3.69e-27,42;CL:0002057,3.69e-27,42;CL:0000473,2.07e-23,48;CL:0000234,2.07e-23,48;CL:0000766,3.25e-19,72;CL:0002194,3.67e-18,59;CL:0000576,3.67e-18,59;CL:0000040,3.67e-18,59;CL:0000559,3.67e-18,59;CL:0002009,1.74e-17,61;CL:0000839,5.72e-16,66;CL:0000557,1.08e-15,67;CL:0000763,8.80e-12,108;CL:0000049,8.80e-12,108;CL:0000214,1.29e-09,3;CL:0000775,1.59e-09,3;CL:0000738,1.03e-08,136;CL:0002087,4.76e-08,115;CL:0002031,1.32e-07,120;CL:0000048,4.48e-07,427;CL:0000153,6.31e-07,9;CL:0000447,6.31e-07,9;CL:0000723,6.71e-07,433;CL:0002032,7.02e-07,161;CL:0000837,7.02e-07,161 | |||
|ontology_enrichment_development_v019=CL:0002057;1.27e-19;42 | |ontology_enrichment_development_v019=CL:0002057;1.27e-19;42 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002204!8.90e-16!167;UBERON:0002371!8.50e-14!80;UBERON:0001474!1.14e-12!86;UBERON:0002193!1.16e-12!112;UBERON:0002405!2.60e-12!115;UBERON:0004765!3.05e-12!101;UBERON:0001434!3.05e-12!101;UBERON:0002390!9.59e-12!102;UBERON:0003061!9.59e-12!102;UBERON:0000926!4.06e-09!448;UBERON:0004120!4.06e-09!448;UBERON:0006603!4.06e-09!448 | |ontology_enrichment_uberon=UBERON:0002204!8.90e-16!167;UBERON:0002371!8.50e-14!80;UBERON:0001474!1.14e-12!86;UBERON:0002193!1.16e-12!112;UBERON:0002405!2.60e-12!115;UBERON:0004765!3.05e-12!101;UBERON:0001434!3.05e-12!101;UBERON:0002390!9.59e-12!102;UBERON:0003061!9.59e-12!102;UBERON:0000926!4.06e-09!448;UBERON:0004120!4.06e-09!448;UBERON:0006603!4.06e-09!448 | ||
|ontology_enrichment_uberon_v019=UBERON:0006915;1.18e-09;3!UBERON:0007616;1.18e-09;3!UBERON:0002217;1.18e-09;3!UBERON:0002018;1.18e-09;3!UBERON:0004905;1.05e-07;8!UBERON:0000982;1.05e-07;8!UBERON:0004770;1.05e-07;8 | |ontology_enrichment_uberon_v019=UBERON:0006915;1.18e-09;3!UBERON:0007616;1.18e-09;3!UBERON:0002217;1.18e-09;3!UBERON:0002018;1.18e-09;3!UBERON:0004905;1.05e-07;8!UBERON:0000982;1.05e-07;8!UBERON:0004770;1.05e-07;8 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0001434,1.01e-16,100;UBERON:0002405,3.28e-14,93;UBERON:0002204,9.91e-14,167;UBERON:0002371,1.58e-13,76;UBERON:0002193,1.75e-13,108;UBERON:0004765,9.90e-13,90;UBERON:0001474,2.39e-12,82;UBERON:0002390,1.70e-11,98;UBERON:0003061,1.70e-11,98;UBERON:0006915,1.29e-09,3;UBERON:0007616,1.29e-09,3;UBERON:0002217,1.29e-09,3;UBERON:0002018,1.29e-09,3;UBERON:0004905,1.28e-07,8;UBERON:0000982,1.28e-07,8;UBERON:0004770,1.28e-07,8 | |||
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| ||
|short_description=p@chr6:160103621..160103639,+ | |short_description=p@chr6:160103621..160103639,+ | ||
}} | }} |
Revision as of 05:25, 17 November 2012
Short description: | p@chr6:160103621..160103639, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr6:160103621..160103639, + |
Coexpression cluster: | C107_Neutrophils_CD14_Eosinophils_Monocytederived_Whole_Peripheral_blood |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
classical monocyte | 3.69e-27 | 42 |
CD14-positive, CD16-negative classical monocyte | 3.69e-27 | 42 |
defensive cell | 2.07e-23 | 48 |
phagocyte | 2.07e-23 | 48 |
myeloid leukocyte | 3.25e-19 | 72 |
monopoietic cell | 3.67e-18 | 59 |
monocyte | 3.67e-18 | 59 |
monoblast | 3.67e-18 | 59 |
promonocyte | 3.67e-18 | 59 |
macrophage dendritic cell progenitor | 1.74e-17 | 61 |
myeloid lineage restricted progenitor cell | 5.72e-16 | 66 |
granulocyte monocyte progenitor cell | 1.08e-15 | 67 |
myeloid cell | 8.80e-12 | 108 |
common myeloid progenitor | 8.80e-12 | 108 |
synovial cell | 1.29e-09 | 3 |
neutrophil | 1.59e-09 | 3 |
leukocyte | 1.03e-08 | 136 |
nongranular leukocyte | 4.76e-08 | 115 |
hematopoietic lineage restricted progenitor cell | 1.32e-07 | 120 |
multi fate stem cell | 4.48e-07 | 427 |
GAG secreting cell | 6.31e-07 | 9 |
carbohydrate secreting cell | 6.31e-07 | 9 |
somatic stem cell | 6.71e-07 | 433 |
hematopoietic oligopotent progenitor cell | 7.02e-07 | 161 |
hematopoietic multipotent progenitor cell | 7.02e-07 | 161 |
Ontology term | p-value | n |
---|---|---|
skeletal system | 1.01e-16 | 100 |
immune system | 3.28e-14 | 93 |
musculoskeletal system | 9.91e-14 | 167 |
bone marrow | 1.58e-13 | 76 |
hemolymphoid system | 1.75e-13 | 108 |
skeletal element | 9.90e-13 | 90 |
bone element | 2.39e-12 | 82 |
hematopoietic system | 1.70e-11 | 98 |
blood island | 1.70e-11 | 98 |
stratified squamous epithelium | 1.29e-09 | 3 |
layer of synovial tissue | 1.29e-09 | 3 |
synovial joint | 1.29e-09 | 3 |
synovial membrane of synovial joint | 1.29e-09 | 3 |
articulation | 1.28e-07 | 8 |
skeletal joint | 1.28e-07 | 8 |
articular system | 1.28e-07 | 8 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.