FFCP PHASE1:Hg19::chr5:39074739..39074749,+: Difference between revisions
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|ontology_enrichment_celltype=CL:0002057!2.89e-14!42;CL:0000766!6.26e-13!76;CL:0000860!1.16e-12!45;CL:0000557!3.58e-11!71;CL:0000738!1.43e-10!140;CL:0000839!7.88e-10!70;CL:0002031!1.86e-09!124;CL:0002009!3.31e-09!65;CL:0002194!3.19e-08!63;CL:0000576!3.19e-08!63;CL:0000040!3.19e-08!63;CL:0000559!3.19e-08!63;CL:0000763!1.85e-07!112;CL:0000049!1.85e-07!112;CL:0002032!2.29e-07!165;CL:0000837!2.29e-07!165;CL:0000988!3.30e-07!182;CL:0002087!3.55e-07!119;CL:0000037!6.58e-07!172;CL:0000566!6.58e-07!172 | |ontology_enrichment_celltype=CL:0002057!2.89e-14!42;CL:0000766!6.26e-13!76;CL:0000860!1.16e-12!45;CL:0000557!3.58e-11!71;CL:0000738!1.43e-10!140;CL:0000839!7.88e-10!70;CL:0002031!1.86e-09!124;CL:0002009!3.31e-09!65;CL:0002194!3.19e-08!63;CL:0000576!3.19e-08!63;CL:0000040!3.19e-08!63;CL:0000559!3.19e-08!63;CL:0000763!1.85e-07!112;CL:0000049!1.85e-07!112;CL:0002032!2.29e-07!165;CL:0000837!2.29e-07!165;CL:0000988!3.30e-07!182;CL:0002087!3.55e-07!119;CL:0000037!6.58e-07!172;CL:0000566!6.58e-07!172 | ||
|ontology_enrichment_celltype_v019=CL:0000860;7.64e-38;33!CL:0002057;7.64e-38;33!CL:0000473;6.19e-26;39!CL:0000234;6.19e-26;39!CL:0000094;1.57e-21;8!CL:0000775;2.31e-21;3!CL:0000576;1.84e-17;48!CL:0000081;1.29e-15;11!CL:0000766;4.49e-15;69!CL:0000771;6.00e-15;2!CL:0000763;8.25e-11;100!CL:0000511;7.09e-08;1!CL:0002625;7.09e-08;1!CL:0000216;7.09e-08;1 | |ontology_enrichment_celltype_v019=CL:0000860;7.64e-38;33!CL:0002057;7.64e-38;33!CL:0000473;6.19e-26;39!CL:0000234;6.19e-26;39!CL:0000094;1.57e-21;8!CL:0000775;2.31e-21;3!CL:0000576;1.84e-17;48!CL:0000081;1.29e-15;11!CL:0000766;4.49e-15;69!CL:0000771;6.00e-15;2!CL:0000763;8.25e-11;100!CL:0000511;7.09e-08;1!CL:0002625;7.09e-08;1!CL:0000216;7.09e-08;1 | ||
|ontology_enrichment_celltype_v019_2=CL:0000766,2.51e-33,72;CL:0000860,3.22e-33,42;CL:0002057,3.22e-33,42;CL:0000473,1.07e-28,48;CL:0000234,1.07e-28,48;CL:0002194,2.29e-22,59;CL:0000576,2.29e-22,59;CL:0000040,2.29e-22,59;CL:0000559,2.29e-22,59;CL:0000094,1.30e-21,8;CL:0002009,1.50e-21,61;CL:0000775,1.82e-21,3;CL:0000763,5.14e-21,108;CL:0000049,5.14e-21,108;CL:0000839,1.01e-19,66;CL:0000557,2.19e-19,67;CL:0000738,6.60e-16,136;CL:0000081,1.13e-15,11;CL:0000771,5.62e-15,2;CL:0002032,7.75e-13,161;CL:0000837,7.75e-13,161;CL:0000037,3.86e-12,168;CL:0000988,2.52e-11,177;CL:0002087,3.84e-10,115;CL:0002031,1.33e-09,120;CL:0000511,4.71e-08,1;CL:0002625,4.71e-08,1;CL:0000216,4.71e-08,1 | |||
|ontology_enrichment_development_v019=CL:0002057;2.38e-22;42!CL:0000049;1.63e-08;108!UBERON:0005425;7.09e-08;1 | |ontology_enrichment_development_v019=CL:0002057;2.38e-22;42!CL:0000049;1.63e-08;108!UBERON:0005425;7.09e-08;1 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0003081!1.03e-12!216;UBERON:0002390!3.79e-10!102;UBERON:0003061!3.79e-10!102;UBERON:0002371!2.05e-09!80;UBERON:0001474!1.21e-08!86;UBERON:0002193!1.48e-08!112;UBERON:0001737!1.08e-07!9 | |ontology_enrichment_uberon=UBERON:0003081!1.03e-12!216;UBERON:0002390!3.79e-10!102;UBERON:0003061!3.79e-10!102;UBERON:0002371!2.05e-09!80;UBERON:0001474!1.21e-08!86;UBERON:0002193!1.48e-08!112;UBERON:0001737!1.08e-07!9 | ||
|ontology_enrichment_uberon_v019=UBERON:0001136;7.09e-08;1!UBERON:0000941;7.09e-08;1!UBERON:0001343;7.09e-08;1!UBERON:0001785;7.09e-08;1!UBERON:0002464;7.09e-08;1!UBERON:0004904;7.09e-08;1!UBERON:0001021;7.09e-08;1!UBERON:0004910;7.09e-08;1!UBERON:0004813;7.09e-08;1 | |ontology_enrichment_uberon_v019=UBERON:0001136;7.09e-08;1!UBERON:0000941;7.09e-08;1!UBERON:0001343;7.09e-08;1!UBERON:0001785;7.09e-08;1!UBERON:0002464;7.09e-08;1!UBERON:0004904;7.09e-08;1!UBERON:0001021;7.09e-08;1!UBERON:0004910;7.09e-08;1!UBERON:0004813;7.09e-08;1 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,8.97e-17,76;UBERON:0001474,2.40e-15,82;UBERON:0004765,9.76e-14,90;UBERON:0002405,3.33e-13,93;UBERON:0002390,2.18e-12,98;UBERON:0003061,2.18e-12,98;UBERON:0001434,4.38e-12,100;UBERON:0002193,5.56e-11,108;UBERON:0003081,2.36e-10,203;UBERON:0002204,2.27e-09,167;UBERON:0001136,4.71e-08,1;UBERON:0001343,4.71e-08,1;UBERON:0004910,4.71e-08,1;UBERON:0005154,4.71e-08,1;UBERON:0005295,4.71e-08,1;UBERON:0004813,4.71e-08,1;UBERON:0005297,4.71e-08,1;UBERON:0005294,4.71e-08,1;UBERON:0010141,4.71e-08,1;UBERON:0005891,4.71e-08,1;UBERON:0000941,6.63e-08,1;UBERON:0001785,6.63e-08,1;UBERON:0002464,6.63e-08,1;UBERON:0004904,6.63e-08,1;UBERON:0001021,6.63e-08,1;UBERON:0003902,6.63e-08,1;UBERON:0005425,6.63e-08,1 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0.218441372130172,0,0.123766352960047,0,0.672325146451775,0,0,0,0,0,0,0,0,0.125542639594803,0.534893840235659,0.410502947249729,0.314843125254717,0,0,0,0.919421224478927,0,0,0,0,0,0.553995408531877,0,0,0,0,0,0,0,0.727752183563449,0.464858073811369,0.411167888021826,0.619412741790207,0.575384784644301,0.256160706529101,0.709446689665756,2.75796544589295,0.645484683583826,0,0,0.272906150057846,0,3.36692281607993,2.88836124368484,1.91801137739712,1.64925650093358,1.19678194572979,2.13112375266347,5.5139755339431,1.13477044938228,1.24564449799115,0.251248665256743,1.5644487552606,1.3031330682307,4.23779651843358,5.15588690382591,7.27863491114034,0.211255286311942,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.661044872784862,0,0.569212969109448,0,0,0,1.12101712596307,0,0.196709770113833,0.393010762749165,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.150575119077773,0,0,0,0,0,0.267440195783507,0.144824403882799,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.132957960518865,0,0,0,0.79504962946682,0.860234595106124,0.347140501607594,0,0,0.550236083880135,0.417989933073621,0,0,0,0,0,0.24406205754817,0,0.81014194788176,0.0892997282840798,0,0.563057402416611,1.53316637465883,0.949265659568129,0.366403487860815,3.9534125230819,3.87780264148325,0,0,0,0.529636723252875,0,0.354668382198357,0.560677600142307,1.06748995729705,0,0,0,0,0,0,0,0,0.570471821544449,0,0,0,0,0,0,0,0,0.494533858557114,0,0,0,0,0,0,0,0,0,0,0.213557388818567,0,0.300091096084402,0.103052529238439,0,0,0.168776332241266,0,0,0,0.161646056818812,0,0,0,0.386521706326594,0,0,0,0,0,0,0,0,0,0,0,0,0,0.236613600079688,0.337169380156203,0.241011029883482,0.220587945464788,0.435758888184812,0.474541238222193,0.134831308160164,0.588664395376038,0.38474715694639,0,0,0,0,0,0,0,0,0,0,0,1.1240175325762,0,0,0,0,0,0,0,0.144366447761074,0,0,0,0,0,0.234004265139238,0.445893486866185,0,0,0,0,0,0,0.492663237895943,0.176096868026452,0.207328115540772,0.288239906833923,0.25248486685276,0,0,0,0,0,0,0,0,0,0,0,0,0,0.531876233169741,0,0,0,0,0,0,0,0,0,0,0,0,0.099972991182057,0,0,0,0,0,0,0,0.410952645100767,0,0.112085143993527,0,0,0.641715181398742,0,0,0,0,0,2.99602809578873,2.99161459204025,4.55857064779639,0,0,0,0,0.178428988797162,0,0.117141414992713,0,0,0,0,0.553107505625109,0,0,0.343143423810856,0,0.431428401637234,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.784349769176855,0,0.105551628892876,0,0.170093705276516,0,0,0,0,0,0,0,0,0,0.256450125116389,0,0,0,0,0,0,0,1.6068392984416,0,0,0.15350367472613,0.275673144969061,0,0,0,0,0,0,0,0.2023155617111,0,0,0,0.308033580176089,0,0,0,0,0,0,0,0,0,0,1.56989728039846,0.179872457583315,0.274537029736055,0,0,1.58510321173008,0,0,0.487426979262569,1.05650146756755,0,0,0,0.551365343546124,0,0,0,0,0.202910376962704,0.30982349809975,0,0.143411352204052,0,0,0,0,0,0,0,0,0,1.08890984861323,0.0941438007767792,0,0,0,0,0,0,0.569647187174163,0.476463550915578,0,0.648473311192717,0.540031437238115,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.23874448473769,0,0,0,0,0,0.16480387422676,0.422250816255987,0.19924798825107,0,0,0,0,0,0,0.179021174675609,0,0,0,0,0.969332746095218,0,0,0,0,0,0,0,0,0,0,0,0,0.120596438625408,0,0.110579259931225,0,0,0,0,0,0.227884111694002,0,0.0897576444097721,0.108647371922008,0,0,0,0,0.156980256395025,0,0,0,0.671286347903371,0,0,0,0.163232808159148,0,0,0,0,0,0.296521128680622,0.123563938946503,0,0.134802265961354,0,0,0,0,0,0,0,0,0,0,0,0,0,0.313932918407225,0,0.284609546029793,0,0,0.293977192243133,0.174118413160805,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.124252535565433,0.235694034616795,0,0,0,0,0,0,0,0,0,0.558564802544508,0.229160424011684,0,0,0.429226048136571,0,0.134366944973453,0,0,0,0,0,0.0984274815147488,0.254019996197353,0,0.136203406111576,0,0,0,0.2249738915515,0.77380195455795,0.0607495566580247,0,0,0,0.105600336519406,0,0,0,0,0,0,0,0,0,0.082092520749339,0,0.113312091520126,0,0,0.258565912723101,0.13223260174269,0,0,0,0,0,0,0,0,0,0,0,0.306345576763462,0,0,0,0,0,0.573409195690071,0.110929051536852,0.18628920882415,0,0.124980407962107,0,0.285465333544967,0,0,0,0,0,0.554805861502613,0,0.50313580350515,0,0,0.151230923763239,0.15543720058278,0,0,0,0,0,0,0,0.601030435988874,0,0,0.363697318405119,0.751873899297419,0.464033759878494,0,0,0,0,0,0,0,0,0,0,0.244736704506468,0,0.308801447160972,0.657852148736121,0.176689145945881,0,0,0,0.345430341731199,0,0,0,0,0,0,0.245772908753719,0,0.19998739585493,0,0,0,0.368211900503681,0,0,0,0.107824811396682,0,0,0,0,0,0,0,0,0,0.352675943690684,0,0.128458450192919,0,0,0.615349092722265,0,0,0,1.42769420259154,0.0981477185010256,0,0.183428598521679,0,0,0,0,0,0.20170506870352,0,0,0,0,0,0.781078098613847,0,0,0.546974809018219,0,0.496211178389294,0,0,0,0,0,0,0,0.115233987555779,0,0.271878931907327,0.131545547125698,0,0.111231401892069,0.078493092850514,0,0,0,0,0,0,0,0,0,0,0.414432328326074,0.17071847709395,0,0,0,0,0,0,0.62041277132864,0,0,0,0,0,0,0,0,0,0.198950775161368,0,0,0,0,0,0,0,0.245148321753905,0.235676547101626,0.196308467114945,0.29704640032708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|short_description=p@chr5:39074739..39074749,+ | |short_description=p@chr5:39074739..39074749,+ | ||
}} | }} |
Revision as of 14:45, 18 November 2012
Short description: | p@chr5:39074739..39074749, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr5:39074739..39074749, + |
Coexpression cluster: | C0_CD14_Eosinophils_Neutrophils_Basophils_CD34_immature_Peripheral |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
myeloid leukocyte | 2.51e-33 | 72 |
classical monocyte | 3.22e-33 | 42 |
CD14-positive, CD16-negative classical monocyte | 3.22e-33 | 42 |
defensive cell | 1.07e-28 | 48 |
phagocyte | 1.07e-28 | 48 |
monopoietic cell | 2.29e-22 | 59 |
monocyte | 2.29e-22 | 59 |
monoblast | 2.29e-22 | 59 |
promonocyte | 2.29e-22 | 59 |
granulocyte | 1.30e-21 | 8 |
macrophage dendritic cell progenitor | 1.50e-21 | 61 |
neutrophil | 1.82e-21 | 3 |
myeloid cell | 5.14e-21 | 108 |
common myeloid progenitor | 5.14e-21 | 108 |
myeloid lineage restricted progenitor cell | 1.01e-19 | 66 |
granulocyte monocyte progenitor cell | 2.19e-19 | 67 |
leukocyte | 6.60e-16 | 136 |
blood cell | 1.13e-15 | 11 |
eosinophil | 5.62e-15 | 2 |
hematopoietic oligopotent progenitor cell | 7.75e-13 | 161 |
hematopoietic multipotent progenitor cell | 7.75e-13 | 161 |
hematopoietic stem cell | 3.86e-12 | 168 |
hematopoietic cell | 2.52e-11 | 177 |
nongranular leukocyte | 3.84e-10 | 115 |
hematopoietic lineage restricted progenitor cell | 1.33e-09 | 120 |
androgen binding protein secreting cell | 4.71e-08 | 1 |
seminiferous tubule epithelial cell | 4.71e-08 | 1 |
Sertoli cell | 4.71e-08 | 1 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 8.97e-17 | 76 |
bone element | 2.40e-15 | 82 |
skeletal element | 9.76e-14 | 90 |
immune system | 3.33e-13 | 93 |
hematopoietic system | 2.18e-12 | 98 |
blood island | 2.18e-12 | 98 |
skeletal system | 4.38e-12 | 100 |
hemolymphoid system | 5.56e-11 | 108 |
lateral plate mesoderm | 2.36e-10 | 203 |
musculoskeletal system | 2.27e-09 | 167 |
mesothelium | 4.71e-08 | 1 |
seminiferous tubule of testis | 4.71e-08 | 1 |
epithelium of male gonad | 4.71e-08 | 1 |
epithelial cord | 4.71e-08 | 1 |
sex cord | 4.71e-08 | 1 |
seminiferous tubule epithelium | 4.71e-08 | 1 |
testis sex cord | 4.71e-08 | 1 |
genital ridge | 4.71e-08 | 1 |
primitive sex cord of indifferent gonad | 4.71e-08 | 1 |
coelomic epithelium | 4.71e-08 | 1 |
cranial nerve II | 6.63e-08 | 1 |
cranial nerve | 6.63e-08 | 1 |
nerve trunk | 6.63e-08 | 1 |
nerve connecting eye with brain | 6.63e-08 | 1 |
nerve | 6.63e-08 | 1 |
retinal neural layer | 6.63e-08 | 1 |
presumptive neural retina | 6.63e-08 | 1 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.