FFCP PHASE1:Hg19::chr7:54614335..54614351,+: Difference between revisions
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|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019=CL:0000333;6.34e-08;5 | |ontology_enrichment_celltype_v019=CL:0000333;6.34e-08;5 | ||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0005425;8.34e-34;1!UBERON:0003056;3.06e-12;3 | |ontology_enrichment_development_v019=UBERON:0005425;8.34e-34;1!UBERON:0003056;3.06e-12;3 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
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| ||
|short_description=p19@VSTM2A | |short_description=p19@VSTM2A | ||
}} | }} |
Revision as of 22:31, 18 November 2012
Short description: | p19@VSTM2A |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_19_at_VSTM2A_5end |
Coexpression cluster: | NA |
Association with transcript: | -13bp_to_ENST00000466888_5end |
EntrezGene: | VSTM2A |
HGNC: | 28499 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
cranial nerve II | 9.85e-34 | 1 |
cranial nerve | 9.85e-34 | 1 |
nerve trunk | 9.85e-34 | 1 |
nerve connecting eye with brain | 9.85e-34 | 1 |
nerve | 9.85e-34 | 1 |
retinal neural layer | 9.85e-34 | 1 |
presumptive neural retina | 9.85e-34 | 1 |
neural tissue | 1.27e-17 | 2 |
multi cell component structure | 1.27e-17 | 2 |
neuron projection bundle | 1.27e-17 | 2 |
peripheral nervous system | 1.31e-15 | 8 |
layer of retina | 1.70e-09 | 4 |
sympathetic nervous system | 6.13e-08 | 5 |
autonomic nervous system | 6.13e-08 | 5 |
retina | 9.49e-07 | 6 |
photoreceptor array | 9.49e-07 | 6 |
posterior segment of eyeball | 9.49e-07 | 6 |
Ontology term | p-value | n |
---|---|---|
mixed cell type cancer | 6.48e-18 | 2 |
carcinosarcoma | 6.48e-18 | 2 |
lung small cell carcinoma | 1.12e-09 | 4 |
sarcoma | 1.29e-07 | 20 |
neuroendocrine tumor | 8.02e-07 | 6 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.