FFCP PHASE1:Hg19::chr16:15826512..15826526,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 9: | Line 9: | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019= | |ontology_enrichment_celltype_v019= | ||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0005754;2.66e-18;1!UBERON:0004874;4.44e-18;1!UBERON:0009143;1.03e-17;1!UBERON:0006242;1.03e-17;1!UBERON:0005425;1.03e-17;1!UBERON:0007297;7.98e-10;2!UBERON:0003056;9.11e-07;3 | |ontology_enrichment_development_v019=UBERON:0005754;2.66e-18;1!UBERON:0004874;4.44e-18;1!UBERON:0009143;1.03e-17;1!UBERON:0006242;1.03e-17;1!UBERON:0005425;1.03e-17;1!UBERON:0007297;7.98e-10;2!UBERON:0003056;9.11e-07;3 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!4.54e-39!115;UBERON:0006947!2.23e-15!3;UBERON:0004054!2.23e-15!3;UBERON:0003135!4.79e-15!11;UBERON:0005904!1.19e-11!4;UBERON:0005409!5.52e-11!35;UBERON:0000059!1.91e-10!11;UBERON:0003101!1.10e-09!22;UBERON:0000079!1.10e-09!22;UBERON:0000160!1.90e-09!27;UBERON:0001155!1.93e-08!9;UBERON:0003133!6.74e-08!48;UBERON:0005156!1.87e-07!59;UBERON:0000990!1.87e-07!59;UBERON:0004921!2.21e-07!129;UBERON:0004185!2.21e-07!129 | |ontology_enrichment_uberon=UBERON:0007023!4.54e-39!115;UBERON:0006947!2.23e-15!3;UBERON:0004054!2.23e-15!3;UBERON:0003135!4.79e-15!11;UBERON:0005904!1.19e-11!4;UBERON:0005409!5.52e-11!35;UBERON:0000059!1.91e-10!11;UBERON:0003101!1.10e-09!22;UBERON:0000079!1.10e-09!22;UBERON:0000160!1.90e-09!27;UBERON:0001155!1.93e-08!9;UBERON:0003133!6.74e-08!48;UBERON:0005156!1.87e-07!59;UBERON:0000990!1.87e-07!59;UBERON:0004921!2.21e-07!129;UBERON:0004185!2.21e-07!129 | ||
|ontology_enrichment_uberon_v019=UBERON:0006947;2.10e-23;3!UBERON:0004054;2.10e-23;3!UBERON:0000998;2.66e-18;1!UBERON:0006868;2.66e-18;1!UBERON:0001000;4.44e-18;1!UBERON:0000989;4.44e-18;1!UBERON:0008811;4.44e-18;1!UBERON:0005352;4.44e-18;1!UBERON:0005904;8.03e-18;4!UBERON:0000941;1.03e-17;1!UBERON:0001785;1.03e-17;1!UBERON:0002464;1.03e-17;1!UBERON:0004904;1.03e-17;1!UBERON:0001021;1.03e-17;1!UBERON:0003135;2.15e-14;11!UBERON:0002108;4.39e-14;4!UBERON:0001255;1.03e-09;2!UBERON:0001556;1.03e-09;2!UBERON:0003714;1.57e-09;2!UBERON:0005162;1.57e-09;2!UBERON:0000122;1.57e-09;2!UBERON:0000160;8.08e-09;17!UBERON:0000058;1.09e-07;10!UBERON:0003101;1.73e-07;22!UBERON:0000079;1.73e-07;22!UBERON:0004921;4.97e-07;33!UBERON:0005409;5.09e-07;22!UBERON:0001043;9.11e-07;3!UBERON:0002110;9.11e-07;3!UBERON:0002114;9.11e-07;2 | |ontology_enrichment_uberon_v019=UBERON:0006947;2.10e-23;3!UBERON:0004054;2.10e-23;3!UBERON:0000998;2.66e-18;1!UBERON:0006868;2.66e-18;1!UBERON:0001000;4.44e-18;1!UBERON:0000989;4.44e-18;1!UBERON:0008811;4.44e-18;1!UBERON:0005352;4.44e-18;1!UBERON:0005904;8.03e-18;4!UBERON:0000941;1.03e-17;1!UBERON:0001785;1.03e-17;1!UBERON:0002464;1.03e-17;1!UBERON:0004904;1.03e-17;1!UBERON:0001021;1.03e-17;1!UBERON:0003135;2.15e-14;11!UBERON:0002108;4.39e-14;4!UBERON:0001255;1.03e-09;2!UBERON:0001556;1.03e-09;2!UBERON:0003714;1.57e-09;2!UBERON:0005162;1.57e-09;2!UBERON:0000122;1.57e-09;2!UBERON:0000160;8.08e-09;17!UBERON:0000058;1.09e-07;10!UBERON:0003101;1.73e-07;22!UBERON:0000079;1.73e-07;22!UBERON:0004921;4.97e-07;33!UBERON:0005409;5.09e-07;22!UBERON:0001043;9.11e-07;3!UBERON:0002110;9.11e-07;3!UBERON:0002114;9.11e-07;2 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0006947,2.35e-23,3;UBERON:0004054,2.35e-23,3;UBERON:0000998,2.66e-18,1;UBERON:0006868,2.66e-18,1;UBERON:0000989,3.75e-18,1;UBERON:0008811,3.75e-18,1;UBERON:0006258,3.75e-18,1;UBERON:0005876,3.75e-18,1;UBERON:0004874,3.75e-18,1;UBERON:0001000,5.26e-18,1;UBERON:0005352,5.26e-18,1;UBERON:0000941,8.72e-18,1;UBERON:0001785,8.72e-18,1;UBERON:0002464,8.72e-18,1;UBERON:0004904,8.72e-18,1;UBERON:0001021,8.72e-18,1;UBERON:0003902,8.72e-18,1;UBERON:0005425,8.72e-18,1;UBERON:0005904,8.74e-18,4;UBERON:0003135,2.15e-14,11;UBERON:0002108,5.36e-14,4;UBERON:0007023,3.92e-11,114;UBERON:0001255,1.03e-09,2;UBERON:0001556,1.03e-09,2;UBERON:0003714,1.44e-09,2;UBERON:0005162,1.44e-09,2;UBERON:0000122,1.44e-09,2;UBERON:0000160,8.08e-09,17;UBERON:0003101,1.73e-07,22;UBERON:0000079,1.73e-07,22;UBERON:0004876,4.43e-07,11;UBERON:0002110,8.15e-07,3;UBERON:0006242,8.15e-07,3 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.21079900526674,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0941438007767792,0,0,0,0,0,0,0,0.238231775457789,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.296964680832639,0,0,0,0,0,0,0.996239941255349,0.276283915531148,0,0,0,0,0,0,0,3.45251919729268,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.769502585037971,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.99052386215701,0.442287822516696,0.611030144933625,0,0,0,0,0,0,0,0,0,3.15667522279512,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.698906672968121,0,0,0,0,1.16386819786103,0,0,0,0,0,0,0,1.49417096317547,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.687481272035051,0,0,0.429226048136571,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0524545881349981,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.320362237703084,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.124192805882767,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.161475645631851,1.42769420259154,0,0,0,0,0,0,0,0.225630985047772,0,0,0,0,0,0,0,0,0,0,0,3.47347824872506,0,0,0,0,0,0,0,0,0,0,0,0,0,0.941917114206168,0,0,0.913158720509496,0,0,0.142953088353313,0,0,0,0,0,0,0,0,0,0,11.0080633049642,0,0,0,0,0,0,0.647428837187895,0,0,0,0,0,0,0,0,0,0.154348316215889,1.31135736302374,0,9.0704879048945,0,0,0,0,0,0.0939839179798536,0,0,0,0,0,0.730336388246517,0,0,0,0,0,1.0580536810308,0,0,0,0,0,0,0,0,0,0,0.0757786982182394,0.535928260312357,0,0,0,0,0,0,0,0,0,0.217716747896961,0,0.134704106029175,0.0717222053926763,0,0,0,0,0,0,0.733448665097199,0.813792356631477,0.665756774185513,0.201273793591026,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.21079900526674,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0941438007767792,0,0,0,0,0,0,0,0.238231775457789,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.296964680832639,0,0,0,0,0,0,0.996239941255349,0.276283915531148,0,0,0,0,0,0,0,3.45251919729268,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.769502585037971,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.99052386215701,0.442287822516696,0.611030144933625,0,0,0,0,0,0,0,0,0,3.15667522279512,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.698906672968121,0,0,0,0,1.16386819786103,0,0,0,0,0,0,0,1.49417096317547,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.687481272035051,0,0,0.429226048136571,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0524545881349981,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.320362237703084,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.124192805882767,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.161475645631851,1.42769420259154,0,0,0,0,0,0,0,0.225630985047772,0,0,0,0,0,0,0,0,0,0,0,3.47347824872506,0,0,0,0,0,0,0,0,0,0,0,0,0,0.941917114206168,0,0,0.913158720509496,0,0,0.142953088353313,0,0,0,0,0,0,0,0,0,0,11.0080633049642,0,0,0,0,0,0,0.647428837187895,0,0,0,0,0,0,0,0,0,0.154348316215889,1.31135736302374,0,9.0704879048945,0,0,0,0,0,0.0939839179798536,0,0,0,0,0,0.730336388246517,0,0,0,0,0,1.0580536810308,0,0,0,0,0,0,0,0,0,0,0.0757786982182394,0.535928260312357,0,0,0,0,0,0,0,0,0,0.217716747896961,0,0.134704106029175,0.0717222053926763,0,0,0,0,0,0,0.733448665097199,0.813792356631477,0.665756774185513,0.201273793591026,0 | ||
|short_description=p@chr16:15826512..15826526,- | |short_description=p@chr16:15826512..15826526,- | ||
}} | }} |
Revision as of 01:42, 21 November 2012
Short description: | p@chr16:15826512..15826526, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr16:15826512..15826526, - |
Coexpression cluster: | C48_smooth_bladder_esophagus_colon_penis_aorta_uterus |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
male genital duct | 2.35e-23 | 3 |
internal male genitalia | 2.35e-23 | 3 |
seminal vesicle | 2.66e-18 | 1 |
seminal fluid secreting gland | 2.66e-18 | 1 |
penis | 3.75e-18 | 1 |
intromittent organ | 3.75e-18 | 1 |
lateral plate mesenchyme | 3.75e-18 | 1 |
undifferentiated genital tubercle | 3.75e-18 | 1 |
somatopleure | 3.75e-18 | 1 |
vas deferens | 5.26e-18 | 1 |
spermatic cord | 5.26e-18 | 1 |
cranial nerve II | 8.72e-18 | 1 |
cranial nerve | 8.72e-18 | 1 |
nerve trunk | 8.72e-18 | 1 |
nerve connecting eye with brain | 8.72e-18 | 1 |
nerve | 8.72e-18 | 1 |
retinal neural layer | 8.72e-18 | 1 |
presumptive neural retina | 8.72e-18 | 1 |
duct of male reproductive system | 8.74e-18 | 4 |
male reproductive organ | 2.15e-14 | 11 |
small intestine | 5.36e-14 | 4 |
adult organism | 3.92e-11 | 114 |
urinary bladder | 1.03e-09 | 2 |
lower urinary tract | 1.03e-09 | 2 |
neural tissue | 1.44e-09 | 2 |
multi cell component structure | 1.44e-09 | 2 |
neuron projection bundle | 1.44e-09 | 2 |
intestine | 8.08e-09 | 17 |
male organism | 1.73e-07 | 22 |
male reproductive system | 1.73e-07 | 22 |
urogenital ridge | 4.43e-07 | 11 |
gallbladder | 8.15e-07 | 3 |
gall bladder primordium | 8.15e-07 | 3 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.