FFCP PHASE1:Hg19::chr10:13628933..13629012,+: Difference between revisions
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|ontology_enrichment_celltype=CL:0000738!3.14e-17!140;CL:0000037!1.62e-15!172;CL:0000566!1.62e-15!172;CL:0002032!4.60e-14!165;CL:0000837!4.60e-14!165;CL:0002031!8.65e-14!124;CL:0000988!6.10e-13!182;CL:0002087!9.77e-12!119;CL:0000791!8.65e-09!18;CL:0000789!8.65e-09!18;CL:0002420!8.65e-09!18;CL:0002419!8.65e-09!18;CL:0000790!8.65e-09!18;CL:0000766!7.86e-08!76;CL:0000763!1.50e-07!112;CL:0000049!1.50e-07!112;CL:0000838!1.58e-07!52;CL:0000542!2.14e-07!53;CL:0000051!2.14e-07!53;CL:0000625!8.97e-07!11;CL:0000839!9.60e-07!70 | |ontology_enrichment_celltype=CL:0000738!3.14e-17!140;CL:0000037!1.62e-15!172;CL:0000566!1.62e-15!172;CL:0002032!4.60e-14!165;CL:0000837!4.60e-14!165;CL:0002031!8.65e-14!124;CL:0000988!6.10e-13!182;CL:0002087!9.77e-12!119;CL:0000791!8.65e-09!18;CL:0000789!8.65e-09!18;CL:0002420!8.65e-09!18;CL:0002419!8.65e-09!18;CL:0000790!8.65e-09!18;CL:0000766!7.86e-08!76;CL:0000763!1.50e-07!112;CL:0000049!1.50e-07!112;CL:0000838!1.58e-07!52;CL:0000542!2.14e-07!53;CL:0000051!2.14e-07!53;CL:0000625!8.97e-07!11;CL:0000839!9.60e-07!70 | ||
|ontology_enrichment_celltype_v019=CL:0000791;8.49e-09;18!CL:0000789;8.49e-09;18!CL:0002419;8.49e-09;18!CL:0000625;8.89e-07;11 | |ontology_enrichment_celltype_v019=CL:0000791;8.49e-09;18!CL:0000789;8.49e-09;18!CL:0002419;8.49e-09;18!CL:0000625;8.89e-07;11 | ||
|ontology_enrichment_celltype_v019_2=CL:0000738,7.95e-19,136;CL:0000037,7.88e-17,168;CL:0002032,2.51e-15,161;CL:0000837,2.51e-15,161;CL:0002031,2.83e-15,120;CL:0000988,1.44e-14,177;CL:0002087,4.20e-13,115;CL:0000766,3.32e-09,72;CL:0000791,8.65e-09,18;CL:0000789,8.65e-09,18;CL:0002420,8.65e-09,18;CL:0002419,8.65e-09,18;CL:0000790,8.65e-09,18;CL:0000763,1.34e-08,108;CL:0000049,1.34e-08,108;CL:0000839,4.80e-08,66;CL:0000557,1.02e-07,67;CL:0000838,1.58e-07,52;CL:0000542,2.14e-07,53;CL:0000051,2.14e-07,53;CL:0000625,8.97e-07,11 | |||
|ontology_enrichment_development_v019=CL:0000790;8.49e-09;18 | |ontology_enrichment_development_v019=CL:0000790;8.49e-09;18 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!1.84e-22!115;UBERON:0001049!4.62e-11!57;UBERON:0005068!4.62e-11!57;UBERON:0006241!4.62e-11!57;UBERON:0007135!4.62e-11!57;UBERON:0002780!4.56e-10!41;UBERON:0001890!4.56e-10!41;UBERON:0006240!4.56e-10!41;UBERON:0003080!6.90e-10!42;UBERON:0002616!2.54e-08!59;UBERON:0002390!4.64e-08!102;UBERON:0003061!4.64e-08!102;UBERON:0002020!1.20e-07!34;UBERON:0003528!1.20e-07!34;UBERON:0001893!3.20e-07!34;UBERON:0001017!3.69e-07!82;UBERON:0002791!4.67e-07!33;UBERON:0001869!5.95e-07!32 | |ontology_enrichment_uberon=UBERON:0007023!1.84e-22!115;UBERON:0001049!4.62e-11!57;UBERON:0005068!4.62e-11!57;UBERON:0006241!4.62e-11!57;UBERON:0007135!4.62e-11!57;UBERON:0002780!4.56e-10!41;UBERON:0001890!4.56e-10!41;UBERON:0006240!4.56e-10!41;UBERON:0003080!6.90e-10!42;UBERON:0002616!2.54e-08!59;UBERON:0002390!4.64e-08!102;UBERON:0003061!4.64e-08!102;UBERON:0002020!1.20e-07!34;UBERON:0003528!1.20e-07!34;UBERON:0001893!3.20e-07!34;UBERON:0001017!3.69e-07!82;UBERON:0002791!4.67e-07!33;UBERON:0001869!5.95e-07!32 | ||
|ontology_enrichment_uberon_v019=UBERON:0002780;1.14e-07;41!UBERON:0001890;1.14e-07;41!UBERON:0007023;2.82e-07;114!UBERON:0000073;5.62e-07;53!UBERON:0002616;5.62e-07;53 | |ontology_enrichment_uberon_v019=UBERON:0002780;1.14e-07;41!UBERON:0001890;1.14e-07;41!UBERON:0007023;2.82e-07;114!UBERON:0000073;5.62e-07;53!UBERON:0002616;5.62e-07;53 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,5.24e-22,114;UBERON:0001049,3.29e-11,56;UBERON:0005068,3.29e-11,56;UBERON:0006241,3.29e-11,56;UBERON:0007135,3.29e-11,56;UBERON:0000073,1.35e-10,53;UBERON:0002616,1.35e-10,53;UBERON:0002780,4.56e-10,41;UBERON:0001890,4.56e-10,41;UBERON:0003080,4.56e-10,41;UBERON:0006240,4.56e-10,41;UBERON:0002390,3.20e-09,98;UBERON:0003061,3.20e-09,98;UBERON:0003528,1.20e-07,34;UBERON:0002020,1.20e-07,34;UBERON:0002193,1.70e-07,108;UBERON:0001893,3.20e-07,34;UBERON:0001017,3.24e-07,81;UBERON:0002791,5.69e-07,32;UBERON:0001869,5.95e-07,32;UBERON:0001016,7.19e-07,89;UBERON:0000955,9.58e-07,68;UBERON:0006238,9.58e-07,68 | |||
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| ||
|short_description=p1@PRPF18 | |short_description=p1@PRPF18 | ||
}} | }} |
Revision as of 04:24, 21 November 2012
Short description: | p1@PRPF18 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_PRPF18_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000320054, ENST00000417658, ENST00000430832, NM_003675, uc001imp.2, uc001imq.2_5end |
EntrezGene: | PRPF18 |
HGNC: | 17351 |
UniProt: | Q5T9P8Q5T9P7Q99633 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
leukocyte | 7.95e-19 | 136 |
hematopoietic stem cell | 7.88e-17 | 168 |
hematopoietic oligopotent progenitor cell | 2.51e-15 | 161 |
hematopoietic multipotent progenitor cell | 2.51e-15 | 161 |
hematopoietic lineage restricted progenitor cell | 2.83e-15 | 120 |
hematopoietic cell | 1.44e-14 | 177 |
nongranular leukocyte | 4.20e-13 | 115 |
myeloid leukocyte | 3.32e-09 | 72 |
mature alpha-beta T cell | 8.65e-09 | 18 |
alpha-beta T cell | 8.65e-09 | 18 |
immature T cell | 8.65e-09 | 18 |
mature T cell | 8.65e-09 | 18 |
immature alpha-beta T cell | 8.65e-09 | 18 |
myeloid cell | 1.34e-08 | 108 |
common myeloid progenitor | 1.34e-08 | 108 |
myeloid lineage restricted progenitor cell | 4.80e-08 | 66 |
granulocyte monocyte progenitor cell | 1.02e-07 | 67 |
lymphoid lineage restricted progenitor cell | 1.58e-07 | 52 |
lymphocyte | 2.14e-07 | 53 |
common lymphoid progenitor | 2.14e-07 | 53 |
CD8-positive, alpha-beta T cell | 8.97e-07 | 11 |
Ontology term | p-value | n |
---|---|---|
adult organism | 5.24e-22 | 114 |
neural tube | 3.29e-11 | 56 |
neural rod | 3.29e-11 | 56 |
future spinal cord | 3.29e-11 | 56 |
neural keel | 3.29e-11 | 56 |
regional part of nervous system | 1.35e-10 | 53 |
regional part of brain | 1.35e-10 | 53 |
regional part of forebrain | 4.56e-10 | 41 |
forebrain | 4.56e-10 | 41 |
anterior neural tube | 4.56e-10 | 41 |
future forebrain | 4.56e-10 | 41 |
hematopoietic system | 3.20e-09 | 98 |
blood island | 3.20e-09 | 98 |
brain grey matter | 1.20e-07 | 34 |
gray matter | 1.20e-07 | 34 |
hemolymphoid system | 1.70e-07 | 108 |
telencephalon | 3.20e-07 | 34 |
central nervous system | 3.24e-07 | 81 |
regional part of telencephalon | 5.69e-07 | 32 |
cerebral hemisphere | 5.95e-07 | 32 |
nervous system | 7.19e-07 | 89 |
brain | 9.58e-07 | 68 |
future brain | 9.58e-07 | 68 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.