FFCP PHASE1:Hg19::chr12:51984146..51984157,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=6334|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=10596|TSSclassifier=W|UniProt=|association_with_transcript=96bp_to_ENST00000546961_5end|coexpression_cluster_id=C35|description=CAGE_peak_11_at_SCN8A_5end|id=chr12:51984146..51984157,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_development_v019=UBERON:0010122;3.61e-34;2|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001869!6.29e-58!32;UBERON:0001049!5.06e-57!57;UBERON:0005068!5.06e-57!57;UBERON:0006241!5.06e-57!57;UBERON:0007135!5.06e-57!57;UBERON:0001893!2.50e-54!34;UBERON:0002020!3.39e-54!34;UBERON:0003528!3.39e-54!34;UBERON:0002780!5.44e-54!41;UBERON:0001890!5.44e-54!41;UBERON:0006240!5.44e-54!41;UBERON:0003080!1.32e-52!42;UBERON:0002616!6.65e-51!59;UBERON:0002791!1.30e-50!33;UBERON:0000955!3.04e-49!69;UBERON:0006238!3.04e-49!69;UBERON:0001017!7.69e-47!82;UBERON:0001950!2.79e-46!20;UBERON:0005743!2.15e-44!86;UBERON:0002619!5.86e-42!22;UBERON:0000073!1.26e-39!94;UBERON:0001016!1.26e-39!94;UBERON:0003075!1.06e-38!86;UBERON:0007284!1.06e-38!86;UBERON:0007023!3.67e-37!115;UBERON:0000956!1.01e-36!25;UBERON:0000203!1.01e-36!25;UBERON:0002346!1.05e-36!90;UBERON:0003056!8.50e-35!61;UBERON:0000200!3.06e-28!6;UBERON:0000033!3.81e-27!123;UBERON:0000153!1.37e-25!129;UBERON:0007811!1.37e-25!129;UBERON:0000369!2.30e-20!4;UBERON:0002435!2.30e-20!4;UBERON:0000204!2.30e-20!4;UBERON:0010082!2.30e-20!4;UBERON:0004121!2.70e-19!169;UBERON:0002420!2.99e-19!9;UBERON:0007245!2.99e-19!9;UBERON:0010009!2.99e-19!9;UBERON:0010011!2.99e-19!9;UBERON:0000454!2.99e-19!9;UBERON:0002308!6.11e-19!9;UBERON:0000125!6.11e-19!9;UBERON:0000924!1.07e-18!173;UBERON:0006601!1.07e-18!173;UBERON:0009663!1.81e-17!7;UBERON:0005383!1.03e-15!3;UBERON:0005382!1.03e-15!3;UBERON:0001872!3.58e-15!5;UBERON:0002771!4.33e-15!3;UBERON:0001871!1.24e-14!7;UBERON:0000025!1.46e-13!194;UBERON:0001873!5.03e-11!2;UBERON:0010122!5.03e-11!2;UBERON:0001870!1.19e-10!2;UBERON:0004111!1.13e-09!241;UBERON:0002021!1.76e-08!5;UBERON:0000477!6.20e-08!286;UBERON:0000064!1.46e-07!219;UBERON:0003076!1.92e-07!15;UBERON:0003057!1.92e-07!15;UBERON:0000988!3.54e-07!3;UBERON:0000483!7.47e-07!309|ontology_enrichment_uberon_v019=UBERON:0000369;6.94e-147;4!UBERON:0002435;6.94e-147;4!UBERON:0000204;6.94e-147;4!UBERON:0005383;6.24e-88;3!UBERON:0005382;6.24e-88;3!UBERON:0009663;1.28e-84;7!UBERON:0001874;2.39e-66;1!UBERON:0002420;3.75e-66;9!UBERON:0000125;3.75e-66;9!UBERON:0007245;3.75e-66;9!UBERON:0002308;3.75e-66;9!UBERON:0010009;3.75e-66;9!UBERON:0010011;3.75e-66;9!UBERON:0000454;3.75e-66;9!UBERON:0001882;4.66e-66;1!UBERON:0005403;4.66e-66;1!UBERON:0001873;3.61e-34;2!UBERON:0002791;1.08e-19;32!UBERON:0001869;1.60e-17;32!UBERON:0003528;1.61e-17;34!UBERON:0002020;1.61e-17;34!UBERON:0001893;1.94e-16;34!UBERON:0000349;1.83e-14;5!UBERON:0002780;5.71e-13;41!UBERON:0001890;5.71e-13;41!UBERON:0000073;5.54e-11;53!UBERON:0002616;5.54e-11;53!UBERON:0000955;2.76e-09;68!UBERON:0001017;1.24e-08;75|ontology_enrichment_uberon_v019_2=UBERON:0000369,6.94e-147,4;UBERON:0002435,6.94e-147,4;UBERON:0000204,6.94e-147,4;UBERON:0010082,6.94e-147,4;UBERON:0005383,6.24e-88,3;UBERON:0005382,6.24e-88,3;UBERON:0009663,1.28e-84,7;UBERON:0001874,2.39e-66,1;UBERON:0002420,3.75e-66,9;UBERON:0000125,3.75e-66,9;UBERON:0007245,3.75e-66,9;UBERON:0002308,3.75e-66,9;UBERON:0010009,3.75e-66,9;UBERON:0010011,3.75e-66,9;UBERON:0000454,3.75e-66,9;UBERON:0001882,4.66e-66,1;UBERON:0005403,4.66e-66,1;UBERON:0001873,3.61e-34,2;UBERON:0010122,3.61e-34,2;UBERON:0002791,5.33e-19,32;UBERON:0001869,5.33e-19,32;UBERON:0003528,5.55e-18,34;UBERON:0002020,5.55e-18,34;UBERON:0001893,5.55e-18,34;UBERON:0002780,3.52e-15,41;UBERON:0001890,3.52e-15,41;UBERON:0003080,3.52e-15,41;UBERON:0006240,3.52e-15,41;UBERON:0000349,1.83e-14,5;UBERON:0000073,4.68e-12,53;UBERON:0002616,4.68e-12,53;UBERON:0001049,1.77e-11,56;UBERON:0005068,1.77e-11,56;UBERON:0006241,1.77e-11,56;UBERON:0007135,1.77e-11,56;UBERON:0003056,1.22e-10,61;UBERON:0000955,1.53e-09,68;UBERON:0006238,1.53e-09,68;UBERON:0001017,3.31e-08,81;UBERON:0003075,3.31e-08,82;UBERON:0007284,3.31e-08,82;UBERON:0002346,7.10e-08,86;UBERON:0001016,1.68e-07,89|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.196709770113833,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0654895377488563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.300091096084402,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=6334 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=10596 | |||
|TSSclassifier=W | |||
|UniProt= | |||
|association_with_transcript=96bp_to_ENST00000546961_5end | |||
|coexpression_cluster_id=C35 | |||
|description=CAGE_peak_11_at_SCN8A_5end | |||
|id=chr12:51984146..51984157,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0010122;3.61e-34;2 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001869!6.29e-58!32;UBERON:0001049!5.06e-57!57;UBERON:0005068!5.06e-57!57;UBERON:0006241!5.06e-57!57;UBERON:0007135!5.06e-57!57;UBERON:0001893!2.50e-54!34;UBERON:0002020!3.39e-54!34;UBERON:0003528!3.39e-54!34;UBERON:0002780!5.44e-54!41;UBERON:0001890!5.44e-54!41;UBERON:0006240!5.44e-54!41;UBERON:0003080!1.32e-52!42;UBERON:0002616!6.65e-51!59;UBERON:0002791!1.30e-50!33;UBERON:0000955!3.04e-49!69;UBERON:0006238!3.04e-49!69;UBERON:0001017!7.69e-47!82;UBERON:0001950!2.79e-46!20;UBERON:0005743!2.15e-44!86;UBERON:0002619!5.86e-42!22;UBERON:0000073!1.26e-39!94;UBERON:0001016!1.26e-39!94;UBERON:0003075!1.06e-38!86;UBERON:0007284!1.06e-38!86;UBERON:0007023!3.67e-37!115;UBERON:0000956!1.01e-36!25;UBERON:0000203!1.01e-36!25;UBERON:0002346!1.05e-36!90;UBERON:0003056!8.50e-35!61;UBERON:0000200!3.06e-28!6;UBERON:0000033!3.81e-27!123;UBERON:0000153!1.37e-25!129;UBERON:0007811!1.37e-25!129;UBERON:0000369!2.30e-20!4;UBERON:0002435!2.30e-20!4;UBERON:0000204!2.30e-20!4;UBERON:0010082!2.30e-20!4;UBERON:0004121!2.70e-19!169;UBERON:0002420!2.99e-19!9;UBERON:0007245!2.99e-19!9;UBERON:0010009!2.99e-19!9;UBERON:0010011!2.99e-19!9;UBERON:0000454!2.99e-19!9;UBERON:0002308!6.11e-19!9;UBERON:0000125!6.11e-19!9;UBERON:0000924!1.07e-18!173;UBERON:0006601!1.07e-18!173;UBERON:0009663!1.81e-17!7;UBERON:0005383!1.03e-15!3;UBERON:0005382!1.03e-15!3;UBERON:0001872!3.58e-15!5;UBERON:0002771!4.33e-15!3;UBERON:0001871!1.24e-14!7;UBERON:0000025!1.46e-13!194;UBERON:0001873!5.03e-11!2;UBERON:0010122!5.03e-11!2;UBERON:0001870!1.19e-10!2;UBERON:0004111!1.13e-09!241;UBERON:0002021!1.76e-08!5;UBERON:0000477!6.20e-08!286;UBERON:0000064!1.46e-07!219;UBERON:0003076!1.92e-07!15;UBERON:0003057!1.92e-07!15;UBERON:0000988!3.54e-07!3;UBERON:0000483!7.47e-07!309 | |||
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|short_description=p11@SCN8A | |||
}} |
Revision as of 23:03, 10 September 2013
Short description: | p11@SCN8A |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_11_at_SCN8A_5end |
Coexpression cluster: | C35_caudate_putamen_diencephalon_nucleus_globus_thalamus_insula |
Association with transcript: | 96bp_to_ENST00000546961_5end |
EntrezGene: | SCN8A |
HGNC: | 10596 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.