FFCP PHASE1:Hg19::chr17:56409871..56409890,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA|HGNC=|TSSclassifier=S|UniProt=|association_with_transcript=-2bp_to_AX721088_5end|coexpression_cluster_id=C57|description=CAGE_peak_1_at_AX721088_5end|id=chr17:56409871..56409890,-|ontology_enrichment_celltype=CL:0000037!1.01e-88!172;CL:0000566!1.01e-88!172;CL:0000988!3.50e-84!182;CL:0002032!1.10e-83!165;CL:0000837!1.10e-83!165;CL:0000738!9.80e-66!140;CL:0002031!3.39e-55!124;CL:0002087!2.91e-53!119;CL:0000763!4.74e-51!112;CL:0000049!4.74e-51!112;CL:0000766!4.34e-30!76;CL:0000542!2.61e-27!53;CL:0000051!2.61e-27!53;CL:0000838!6.66e-27!52;CL:0000557!1.23e-26!71;CL:0000839!5.52e-26!70;CL:0002009!1.44e-23!65;CL:0002057!5.70e-23!42;CL:0002194!7.36e-23!63;CL:0000576!7.36e-23!63;CL:0000040!7.36e-23!63;CL:0000559!7.36e-23!63;CL:0000860!4.20e-20!45;CL:0000945!5.13e-14!24;CL:0000826!5.13e-14!24;CL:0000134!1.98e-12!358;CL:0000084!5.11e-12!25;CL:0000827!5.11e-12!25;CL:0002320!3.34e-11!365;CL:0000791!2.13e-08!18;CL:0000789!2.13e-08!18;CL:0002420!2.13e-08!18;CL:0002419!2.13e-08!18;CL:0000790!2.13e-08!18;CL:0000219!3.06e-08!390;CL:0000236!3.87e-08!14|ontology_enrichment_celltype_v019=CL:0000860;2.77e-18;33!CL:0002057;2.77e-18;33!CL:0000473;5.79e-17;39!CL:0000234;5.79e-17;39!CL:0000763;1.12e-16;100!CL:0002087;1.37e-16;104!CL:0000542;1.54e-16;53!CL:0000576;2.41e-16;48!CL:0000738;1.45e-15;136!CL:0000988;2.41e-15;177!CL:0000766;9.27e-15;69!CL:0000945;1.42e-14;24!CL:0000084;1.70e-12;25!CL:0000791;1.03e-08;18!CL:0000789;1.03e-08;18!CL:0002419;1.03e-08;18!CL:0000236;5.02e-08;13|ontology_enrichment_celltype_v019_2=CL:0000037,5.47e-97,168;CL:0000988,3.33e-93,177;CL:0002032,1.11e-91,161;CL:0000837,1.11e-91,161;CL:0000738,9.85e-73,136;CL:0002031,1.38e-61,120;CL:0002087,1.38e-59,115;CL:0000763,2.45e-57,108;CL:0000049,2.45e-57,108;CL:0000766,4.43e-35,72;CL:0000557,2.48e-31,67;CL:0000839,1.26e-30,66;CL:0000542,1.81e-28,53;CL:0000051,1.81e-28,53;CL:0002009,4.77e-28,61;CL:0000838,4.80e-28,52;CL:0002194,2.61e-27,59;CL:0000576,2.61e-27,59;CL:0000040,2.61e-27,59;CL:0000559,2.61e-27,59;CL:0000473,1.03e-25,48;CL:0000234,1.03e-25,48;CL:0000860,6.19e-24,42;CL:0002057,6.19e-24,42;CL:0000134,8.26e-15,354;CL:0000945,1.41e-14,24;CL:0000826,1.41e-14,24;CL:0002320,1.63e-13,361;CL:0000084,1.73e-12,25;CL:0000827,1.73e-12,25;CL:0000219,1.59e-09,386;CL:0000791,1.05e-08,18;CL:0000789,1.05e-08,18;CL:0002420,1.05e-08,18;CL:0002419,1.05e-08,18;CL:0000790,1.05e-08,18;CL:0000236,1.96e-08,14|ontology_enrichment_development_v019=CL:0002057;1.71e-17;42!CL:0000051;1.54e-16;53!CL:0000049;6.78e-16;108!CL:0000790;1.03e-08;18|ontology_enrichment_disease=DOID:2531!4.35e-26!51;DOID:0060083!4.35e-26!51;DOID:1240!3.29e-22!39;DOID:8692!2.94e-18!31;DOID:0060058!3.43e-07!10|ontology_enrichment_disease_v019=DOID:8692;1.63e-18;31!DOID:1240;4.45e-18;39!DOID:2531;1.72e-16;51!DOID:0060083;1.72e-16;51!DOID:0060058;1.89e-07;10|ontology_enrichment_disease_v019_2=DOID:2531,2.77e-27,51;DOID:0060083,2.77e-27,51;DOID:1240,3.87e-23,39;DOID:8692,5.23e-19,31;DOID:0060058,1.91e-07,10|ontology_enrichment_uberon=UBERON:0002390!2.44e-36!102;UBERON:0003061!2.44e-36!102;UBERON:0002193!4.77e-32!112;UBERON:0002371!1.44e-22!80;UBERON:0007023!1.33e-21!115;UBERON:0001474!4.58e-19!86;UBERON:0002405!3.87e-17!115;UBERON:0004765!8.56e-14!101;UBERON:0001434!8.56e-14!101;UBERON:0000178!8.85e-12!15;UBERON:0000179!8.85e-12!15;UBERON:0000463!8.85e-12!15;UBERON:0002384!4.17e-10!375|ontology_enrichment_uberon_v019=UBERON:0000178;3.04e-12;15!UBERON:0000179;3.04e-12;15!UBERON:0000463;3.04e-12;15!UBERON:0002390;2.04e-08;32|ontology_enrichment_uberon_v019_2=UBERON:0002390,1.33e-41,98;UBERON:0003061,1.33e-41,98;UBERON:0002193,6.86e-37,108;UBERON:0002371,1.16e-26,76;UBERON:0002405,1.56e-26,93;UBERON:0001474,1.04e-22,82;UBERON:0007023,5.38e-21,114;UBERON:0004765,2.26e-18,90;UBERON:0001434,4.61e-15,100;UBERON:0000178,3.08e-12,15;UBERON:0000179,3.08e-12,15;UBERON:0000463,3.08e-12,15;UBERON:0002384,4.00e-12,371;UBERON:0003081,7.88e-09,203|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,279.214584603014,274.462270531169,273.677386627663,60.5780986347312,83.6748087851924,42.729250035237,0,0,0,174.068799703938,138.472832442749,61.3624918209831,109.691090889312,126.142457458719,110.8925549358,35.1547294556681,45.3451132426571,35.8030039011519,140.745495138619,88.4229708231814,88.0580142111773,176.64606804832,123.76153429457,92.2924985267409,285.390853183573,146.780084841175,86.5524961392222,152.032845204849,69.7123458270532,101.569864945756,154.546960764478,100.156557071229,69.4395566935311,267.211238039798,90.8229146625345,194.358486242909,200.219739213337,115.289994105303,121.900278652351,213.593999630638,111.207504039463,97.7830930923053,253.761151909311,154.8804267708,108.160044663148,188.884644821611,92.0694089968912,83.8625326718344,35.2796328140943,83.7660941862271,40.8834358741333,48.7506259175789,60.8216416008101,56.5754065173722,83.5087339161858,69.4219203424825,51.5112913616268,70.3984977845291,1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| ||
|DPIdataset=robustDPI | |||
|EntrezGene= | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA | |||
|HGNC= | |||
|TSSclassifier=S | |||
|UniProt= | |||
|association_with_transcript=-2bp_to_AX721088_5end | |||
|coexpression_cluster_id=C57 | |||
|description=CAGE_peak_1_at_AX721088_5end | |||
|id=chr17:56409871..56409890,- | |||
|ontology_enrichment_celltype=CL:0000037!1.01e-88!172;CL:0000566!1.01e-88!172;CL:0000988!3.50e-84!182;CL:0002032!1.10e-83!165;CL:0000837!1.10e-83!165;CL:0000738!9.80e-66!140;CL:0002031!3.39e-55!124;CL:0002087!2.91e-53!119;CL:0000763!4.74e-51!112;CL:0000049!4.74e-51!112;CL:0000766!4.34e-30!76;CL:0000542!2.61e-27!53;CL:0000051!2.61e-27!53;CL:0000838!6.66e-27!52;CL:0000557!1.23e-26!71;CL:0000839!5.52e-26!70;CL:0002009!1.44e-23!65;CL:0002057!5.70e-23!42;CL:0002194!7.36e-23!63;CL:0000576!7.36e-23!63;CL:0000040!7.36e-23!63;CL:0000559!7.36e-23!63;CL:0000860!4.20e-20!45;CL:0000945!5.13e-14!24;CL:0000826!5.13e-14!24;CL:0000134!1.98e-12!358;CL:0000084!5.11e-12!25;CL:0000827!5.11e-12!25;CL:0002320!3.34e-11!365;CL:0000791!2.13e-08!18;CL:0000789!2.13e-08!18;CL:0002420!2.13e-08!18;CL:0002419!2.13e-08!18;CL:0000790!2.13e-08!18;CL:0000219!3.06e-08!390;CL:0000236!3.87e-08!14 | |||
|ontology_enrichment_celltype_v019=CL:0000860;2.77e-18;33!CL:0002057;2.77e-18;33!CL:0000473;5.79e-17;39!CL:0000234;5.79e-17;39!CL:0000763;1.12e-16;100!CL:0002087;1.37e-16;104!CL:0000542;1.54e-16;53!CL:0000576;2.41e-16;48!CL:0000738;1.45e-15;136!CL:0000988;2.41e-15;177!CL:0000766;9.27e-15;69!CL:0000945;1.42e-14;24!CL:0000084;1.70e-12;25!CL:0000791;1.03e-08;18!CL:0000789;1.03e-08;18!CL:0002419;1.03e-08;18!CL:0000236;5.02e-08;13 | |||
|ontology_enrichment_celltype_v019_2=CL:0000037,5.47e-97,168;CL:0000988,3.33e-93,177;CL:0002032,1.11e-91,161;CL:0000837,1.11e-91,161;CL:0000738,9.85e-73,136;CL:0002031,1.38e-61,120;CL:0002087,1.38e-59,115;CL:0000763,2.45e-57,108;CL:0000049,2.45e-57,108;CL:0000766,4.43e-35,72;CL:0000557,2.48e-31,67;CL:0000839,1.26e-30,66;CL:0000542,1.81e-28,53;CL:0000051,1.81e-28,53;CL:0002009,4.77e-28,61;CL:0000838,4.80e-28,52;CL:0002194,2.61e-27,59;CL:0000576,2.61e-27,59;CL:0000040,2.61e-27,59;CL:0000559,2.61e-27,59;CL:0000473,1.03e-25,48;CL:0000234,1.03e-25,48;CL:0000860,6.19e-24,42;CL:0002057,6.19e-24,42;CL:0000134,8.26e-15,354;CL:0000945,1.41e-14,24;CL:0000826,1.41e-14,24;CL:0002320,1.63e-13,361;CL:0000084,1.73e-12,25;CL:0000827,1.73e-12,25;CL:0000219,1.59e-09,386;CL:0000791,1.05e-08,18;CL:0000789,1.05e-08,18;CL:0002420,1.05e-08,18;CL:0002419,1.05e-08,18;CL:0000790,1.05e-08,18;CL:0000236,1.96e-08,14 | |||
|ontology_enrichment_development_v019=CL:0002057;1.71e-17;42!CL:0000051;1.54e-16;53!CL:0000049;6.78e-16;108!CL:0000790;1.03e-08;18 | |||
|ontology_enrichment_disease=DOID:2531!4.35e-26!51;DOID:0060083!4.35e-26!51;DOID:1240!3.29e-22!39;DOID:8692!2.94e-18!31;DOID:0060058!3.43e-07!10 | |||
|ontology_enrichment_disease_v019=DOID:8692;1.63e-18;31!DOID:1240;4.45e-18;39!DOID:2531;1.72e-16;51!DOID:0060083;1.72e-16;51!DOID:0060058;1.89e-07;10 | |||
|ontology_enrichment_disease_v019_2=DOID:2531,2.77e-27,51;DOID:0060083,2.77e-27,51;DOID:1240,3.87e-23,39;DOID:8692,5.23e-19,31;DOID:0060058,1.91e-07,10 | |||
|ontology_enrichment_uberon=UBERON:0002390!2.44e-36!102;UBERON:0003061!2.44e-36!102;UBERON:0002193!4.77e-32!112;UBERON:0002371!1.44e-22!80;UBERON:0007023!1.33e-21!115;UBERON:0001474!4.58e-19!86;UBERON:0002405!3.87e-17!115;UBERON:0004765!8.56e-14!101;UBERON:0001434!8.56e-14!101;UBERON:0000178!8.85e-12!15;UBERON:0000179!8.85e-12!15;UBERON:0000463!8.85e-12!15;UBERON:0002384!4.17e-10!375 | |||
|ontology_enrichment_uberon_v019=UBERON:0000178;3.04e-12;15!UBERON:0000179;3.04e-12;15!UBERON:0000463;3.04e-12;15!UBERON:0002390;2.04e-08;32 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,1.33e-41,98;UBERON:0003061,1.33e-41,98;UBERON:0002193,6.86e-37,108;UBERON:0002371,1.16e-26,76;UBERON:0002405,1.56e-26,93;UBERON:0001474,1.04e-22,82;UBERON:0007023,5.38e-21,114;UBERON:0004765,2.26e-18,90;UBERON:0001434,4.61e-15,100;UBERON:0000178,3.08e-12,15;UBERON:0000179,3.08e-12,15;UBERON:0000463,3.08e-12,15;UBERON:0002384,4.00e-12,371;UBERON:0003081,7.88e-09,203 | |||
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| |||
|short_description=p1@AX721088 | |||
}} |
Revision as of 14:47, 11 September 2013
Short description: | p1@AX721088 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_AX721088_5end |
Coexpression cluster: | C57_Neutrophils_Eosinophils_Whole_CD4_CD8_CD19_Natural |
Association with transcript: | -2bp_to_AX721088_5end |
EntrezGene: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 1.33e-41 | 98 |
blood island | 1.33e-41 | 98 |
hemolymphoid system | 6.86e-37 | 108 |
bone marrow | 1.16e-26 | 76 |
immune system | 1.56e-26 | 93 |
bone element | 1.04e-22 | 82 |
adult organism | 5.38e-21 | 114 |
skeletal element | 2.26e-18 | 90 |
skeletal system | 4.61e-15 | 100 |
blood | 3.08e-12 | 15 |
haemolymphatic fluid | 3.08e-12 | 15 |
organism substance | 3.08e-12 | 15 |
connective tissue | 4.00e-12 | 371 |
lateral plate mesoderm | 7.88e-09 | 203 |
Ontology term | p-value | n |
---|---|---|
hematologic cancer | 2.77e-27 | 51 |
immune system cancer | 2.77e-27 | 51 |
leukemia | 3.87e-23 | 39 |
myeloid leukemia | 5.23e-19 | 31 |
lymphoma | 1.91e-07 | 10 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.